Ciona intestinalis (yellow sea squirt): 100175856
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Entry
100175856 CDS
T01056
Name
(RefSeq) coiled-coil domain-containing protein 174-like
KO
K25178
coiled-coil domain-containing protein 174
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100175856
03041 Spliceosome [BR:
cin03041
]
100175856
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100175856
Spliceosome [BR:
cin03041
]
Complex C
Other components
EJC/TREX
100175856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
100175856
NCBI-ProteinID:
XP_009860618
Ensembl:
ENSCING00000014047
LinkDB
All DBs
Position
12:5344191..5351297
Genome browser
AA seq
537 aa
AA seq
DB search
MINLKAELLKKQHEYKDKNNSKEIPKPLPWKKNKEKEEKSKRVGVSNKGVEDRNNRDLAH
EEENNKLNKVQSILEAKTRMYEKLTSGEIIPDKDDAQMFMVDFEQKSIDAWRNKAEKGES
SKPDVKVKVTNEVQKVIDKAKDEWVEYVDSLGRTRTCKESELHLLQKIDKKLDGKGASGR
TLMSEDMRREEEREQWEEEERSKMEEGPLHYENLRDGEVRELGVGYYSFSGDAGMREEQM
RRLGRMREETEEMKRRNKEKKEKQKSALETRLEKVRQRRVKKLLDQGREIPQSLKEPVKL
EREVEEEEPAAPVEEDVAVVTTSGTREWDEGKGDVWSPAQPKKPPTNWKDPREERLDEFA
PPSSYFQGAKRKNNHPGPLGPPGPPGHSESKHPKIDEQITQQTMQSNPHAPPTYTHPPQP
PYPNCPPFNPLILSNQHTFTPIHNHPTPNNPEPPNQPPKPSSDYPTPNNPIPPNQPPKPG
SDAERIQRLLSQVSEDLTHAVPPNPAPKPFTPTSKPISLKVKPKPQQILSTKSILEE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgattaacttaaaagctgagttgctgaagaaacaacacgaatataaagacaagaataat
tccaaagaaattcctaaaccacttccatggaaaaagaacaaagagaaagaggagaagagc
aaaagagtgggagtgagtaacaaaggagtggaagatagaaacaatcgagatcttgctcat
gaggaggaaaataataaacttaacaaagtgcaatcaatcttagaagcaaagacacgaatg
tacgaaaagttgacgtcgggtgaaataatcccagataaagatgacgcacagatgtttatg
gtggatttcgaacaaaagtcgattgatgcttggaggaataaagcggagaaaggtgaatca
tcgaaacctgatgttaaggtgaaagtgacgaatgaagttcaaaaagttatcgataaagca
aaggatgaatgggtggaatacgtggatagtttgggccgaacacgaacctgtaaggaatcg
gagcttcatcttctgcagaagattgataagaaacttgacggcaagggagcatcaggtcgt
actttgatgtcggaggacatgaggagggaggaggagagagaacaatgggaggaagaggag
aggagcaagatggaggaaggtcctcttcattatgagaatttaagggatggagaggttcgt
gagttgggcgttggttattattcgttctcgggcgatgctgggatgcgggaggagcagatg
aggaggctggggaggatgagggaggagacggaggagatgaagaggaggaataaagagaag
aaggagaaacaaaagagtgcactggaaactcgattggaaaaagttcgtcaaagaagagtg
aagaaattgttggatcaaggcagggaaatcccccaatctttgaaggagccagtcaaacta
gaacgagaggttgaagaggaggaaccagcagctcctgttgaggaagatgttgccgtggta
acaacatccggaacaagggagtgggatgaaggaaaaggtgatgtttggagccccgcccaa
cccaagaaaccaccaacaaattggaaagatcctcgcgaggaaagactcgatgaatttgct
cctccttcatcttacttccaaggagcaaagaggaaaaacaatcatcctggtcctcttgga
ccccctggtcctccaggtcattctgaatcaaaacatccaaagattgatgaacaaattacc
caacaaactatgcaaagcaacccacacgcaccccctacttatacacacccaccccaaccc
ccttaccccaactgccccccatttaacccactaatactctcaaaccaacacacattcacc
ccgatacataatcaccccaccccaaataaccccgaaccccctaaccaaccccccaaacct
agtagcgattaccccaccccaaataatcccataccccctaaccaaccccccaaacctggt
agcgacgctgaaagaatccaacgtttattgtcccaagtttccgaggacctcacccacgct
gtacccccaaatccagccccgaaacccttcacccctacaagtaaaccaatctctttgaaa
gtgaaaccgaaacctcaacaaatattatcaaccaagtcgattttggaggagtaa
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