KEGG   Ciona intestinalis (yellow sea squirt): 100176373
Entry
100176373         CDS       T01056                                 
Name
(RefSeq) myb-binding protein 1A-like protein
  KO
K02331  DNA polymerase phi [EC:2.7.7.7]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cin03036]
    100176373
   03400 DNA repair and recombination proteins [BR:cin03400]
    100176373
Enzymes [BR:cin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100176373
Chromosome and associated proteins [BR:cin03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    100176373
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    100176373
SSDB
Motif
Pfam: DNA_pol_phi Rcd1
Other DBs
NCBI-GeneID: 100176373
NCBI-ProteinID: XP_009858370
LinkDB
Position
4:4417786..4432265
AA seq 1209 aa
MAGRPDSGYLSLFWDLGNNNEEARNKVAQNLVQQILSKQNENEELCEDASYVFGRLVIGL
SSNRKSARVGFATALTNLLLLIPSSVFDSNQLMQLMEEKLKIQGNNKSEDKEVYLGRVFC
LLSLIQSKKLTDENSTESLKETVTQLVKLSETKHFLRSITYHGLTEIAAQVSRESFKNSV
WPLISDRFDNGWESCTPEILYLLETCAKLHPKTCNKEYLKTNKWIPQKSKKGQIIGEHCF
KHLARIVAETTSCHPNINPFAISIISSVGKLGSKSLGKLWSEHLSTTLLSSSPERKYLSI
KLAIHSLSCLEVDQLSEVWSKDLLMHLYHALLNKDNPLHLICKNELPKYLGEKLNQQDVS
WGVQYNLLFRLFSSPGGIHLDSITHTSIIYSIVSHFKLPALLKYIIWLKQLFLYGTRGDV
GIQDINLDVARRWSSSQLSHLVRMQSLPREEEWIGSIIKFLFVHSHFIVTAENSTSSVLE
EGSIKADFIELSQATQSHIQQCFTNVLSWLNNMLPLVYDKTNTEEKKPNVPRIPGTMNSG
NFWLTFITKYADQTLLDKSMKPVFQLDDQLQQIWTKTMDYVAKLTKLKSQGTRSSKSSEA
TALQLLLLHVGLQLISFNPQVQASAVDVLEDLQVIVDERFFKKSKKADADQPHWVDVIVE
ILLTMLSQGSHSVRIVAEQVFRLINPHLTPSSLKLMLDVLKLKSEELMKDDEDVDGDGED
EEGDEEDNAEEAQKKSDADSESSEEESDDGSDEEDAVDVDEEFKKRIKEALGDAAAPSEE
SDANDEDESEDEEFSDDAMMRIDPLLSDIFKQRKLSRKATKKNNRMQVTHFQLRCLDLLE
TFITRQCATNPLVLDLLLPLLDVVESSTKDPEKEILAERATVVLRIKLCKMKGYPHSLDD
DVIDRCHDNIAKALKKCYSASGGVFLSQLASHCCMLYLRVLSGNSGKDSKNSSGAVDVDR
VCSFYSSALEDFMTKRESRIQACVIQDFISRYPNYAQGLIQPLTTMVADGIQLYRKTQAC
LMLSSFYQASPVPQSIKESSSEILTAITNIISTVVDDKDSLKGKYMVALIKLLFQCISSL
KSTNSDFKSAPIVQHLQNFLKIEEVKRSQELNNLTWKILNVFGLVSQSGKIIGDKRSRKR
KNKKKNKEANHDAENIENEGTMNNGEESKESRKQLKTRHLKEKKKLTKASKQKRSKKSEK
QEKEIKAEN
NT seq 3630 nt   +upstreamnt  +downstreamnt
atggctggtagacctgactctggttacttgtctttgttttgggacttaggaaacaataac
gaagaagccaggaataaagttgctcaaaacttggttcaacaaattctatctaagcaaaac
gaaaatgaggaattatgtgaagacgcatcatatgtttttggtagattggtaataggtcta
tcttcaaatcggaaatctgcaagagttggatttgcgaccgcattaaccaatcttttactt
ctgattccttcttctgtgtttgatagtaatcagttaatgcagttaatggaagaaaaatta
aaaattcaaggaaataataaaagtgaagataaagaggtttatcttggacgagtcttttgt
ttactgtcgcttattcaaagcaagaaactgactgatgagaattcaacagaaagtttgaaa
gaaacagtcacccagcttgtaaaactgagtgaaacaaaacattttctgcgctcaattact
taccatggtttaactgaaatagctgcccaggtctcacgtgaaagctttaaaaattcagtt
tggccattaatcagtgatcgatttgataatggttgggaatcatgcactcctgaaatactt
tacttgttggaaacttgcgcaaagttgcatcctaaaacctgcaataaggaatacttaaaa
acaaataagtggatcccacaaaaatcaaaaaaagggcaaataattggtgaacactgcttc
aagcacttagcgagaatagttgcagaaactacatcttgtcatcccaatattaatcccttt
gctatctccatcatttcatcagttgggaagttgggatcaaagagtctcgggaagctgtgg
agtgaacatctttcaaccactcttttgtcttcttcccctgagaggaaatacttgtcaata
aaactcgcaattcattctctgagttgtttggaagtggaccagttgagtgaggtgtggtca
aaggatctcctgatgcatttataccacgcgcttttaaacaaggacaacccccttcacttg
atttgtaaaaacgagttgccgaaatatctgggtgaaaaactgaaccaacaggatgtatct
tggggcgtgcaatacaatttgttgttcagattgtttagcagtcctggaggaatccatctt
gacagcatcactcacacttctattatttactcaattgttagtcattttaaactgccagca
ttactgaagtatatcatttggttgaaacaattattcctgtatggtacaaggggtgatgtt
ggaatacaagatattaacttggatgtagcaagaagatggagtagttcacaactttctcac
ttggttcgaatgcagagtcttccacgagaagaagaatggattgggtcaatcattaagttc
ttgttcgttcattctcattttatcgtgactgcggaaaattccacttcaagtgtgttggaa
gaaggatcaattaaagctgatttcattgagttgtcacaagcaactcaatctcatatccag
cagtgcttcactaatgtattatcgtggctgaataatatgctgcccctggtttatgataag
acaaacactgaagaaaagaaacccaatgttccacgtatacctggtacaatgaacagtggc
aacttttggctcacgtttatcacaaaatacgctgaccagacattgcttgacaaaagcatg
aaacctgtgtttcaacttgatgaccaactacaacagatatggaccaagacaatggattat
gttgcaaagcttactaaacttaaaagtcaaggaacaagaagcagtaaatcatctgaagca
actgctctgcaacttctacttctgcatgttggtctacagctcatctcttttaacccacaa
gtgcaagcgagtgcagttgatgtgttggaagatcttcaagtcattgtagatgaaagattc
ttcaagaaatctaagaaagctgatgctgaccaacctcactgggtggatgttatcgttgaa
attttgttgacaatgttgtcccaaggctcccatagtgttcgaatagtagctgaacaagtc
tttaggttgattaaccctcatttaacaccaagctcactcaagttaatgctggatgttctt
aaactgaagagtgaagagttgatgaaagatgatgaagatgtagatggggatggagaggat
gaggagggagatgaggaggataatgcagaggaagctcagaagaagagcgatgcagattct
gaatcaagtgaagaagaatctgatgatggaagtgatgaggaagatgctgtggatgtagat
gaggagtttaagaaaaggatcaaggaagctctcggtgatgcagctgctcctagtgaggaa
agtgatgcaaatgatgaagatgaaagcgaagatgaggaatttagtgatgatgcaatgatg
aggattgatcctctgctatctgatatctttaaacaaagaaagttatcacgtaaggcgaca
aagaagaacaaccggatgcaagtgactcacttccagctccgatgtttagatcttcttgaa
accttcatcacgaggcagtgcgcgacaaatcctctcgttcttgatcttcttcttccgctc
cttgatgttgttgagtcttccactaaagatccggaaaaagaaatattggccgagcgtgca
actgtcgttttaaggatcaaactttgcaaaatgaagggctaccctcactcgcttgatgat
gatgtcatagatcgttgccatgacaatatagcgaaggcattaaagaaatgttacagtgca
agtggtggtgtattcctcagccagctagcttctcactgctgtatgttatacctgcgtgtg
ctgtctggtaattcaggcaaagactcaaagaattcttccggagcagttgatgtggatcga
gtttgttccttttattcctccgcactggaggactttatgacaaaacgggagagcagaata
caagcgtgtgtaatccaggattttatcagcagatatccaaactatgcacaaggtctcata
caacctcttactactatggtggcagatggaatacagctttatagaaagacccaagcttgc
ctgatgttgtcatcattttaccaagcttcccctgttccccaatctatcaaggaatcatct
agtgaaatattgacagctattactaacatcatatcaacagtagttgatgataaggattca
ttgaaaggaaaatatatggtggcattaattaagttgttgttccaatgcatttcttcattg
aaatctacaaacagtgactttaaatcagcaccaattgttcaacacttacaaaattttctt
aaaattgaagaagtaaaaagatcgcaagaactcaacaatcttacttggaagatacttaat
gtgtttggattagtgtcacaaagtggtaaaataattggggacaaacggtcacgaaaacga
aaaaataagaagaaaaacaaggaagcaaatcatgatgcagaaaatattgaaaacgaagga
actatgaataacggagaagaaagcaaagaaagtagaaaacagttaaaaacgcgtcatctt
aaagaaaaaaagaaattaaccaaagcttcgaaacaaaaacgaagcaaaaagtcggagaaa
caagaaaaagaaatcaaagctgaaaattaa

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