Ciona intestinalis (yellow sea squirt): 100178568
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Entry
100178568 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100178568
KO
K23215
bcl-6 corepressor
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100178568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100178568
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
100178568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
PUFD
Motif
Other DBs
NCBI-GeneID:
100178568
NCBI-ProteinID:
XP_002123788
LinkDB
All DBs
Position
7:complement(2211078..2234912)
Genome browser
AA seq
1828 aa
AA seq
DB search
MADPTMQPVDNLRRNNQKDLPKIPNYQPDLNQRNRGLSNSSENWDQSASYRQNLGQSSAS
SPSLLRFRNDQNYRNDHNLNTPTPPGRMPWENDTTRGLATHHRRADAVDMSVSRRQNEQR
QESISRSLPSSVHPSKPHSYRHPQNGEPPLLSTVKMKGYKDDRTPDSNALLEAVKTRNNL
EIKQLLEKGLDVNSTETGYTAMHLACKLGYMDTIEYLLMCGADITIRDQHGHPAGYYSKP
KGIPLEEMKAKIQPKKRSKPNQTLSMEWMNNVKSIHGDHSLAGTSLSDVHGFSNLPLGLN
SGQTFHSSDHLSTGKLYEPHTSSAYHMPLMKHSTSHTDLNSVSAHKSSYDNFPSPFDYLP
RTPQSSSSLELLRDYQKSSALEPSPHSNSLHLNGTKYPQRHERAKLHSPANFQTQREHSP
MPSRPSPFKGHMGHPKYEFSNRSLDYKRQATESTSPFLVNEFSKSSSRIPPSTNTLSSSY
ALSAQINSPFRTSFYKLNNVQPDTRIPDTAMANHLKLGTPFSYYPNMYPNREIPYPMFYP
PLMPPGLVPGMSGYPNPTEILPHRADHGSLVQPSHYKPDLHHIPMPQQPAIHQVEKIPPH
TITPSSSHDSGSSYKNGWKPQDSVHNDARKRSEQPLLKQQHPVDHEDRRCSEHIPPNNYV
KENHKVTEHVNGQKRTTADTDMRPYMHSVHPSNKHTNNHPQPRTNENAHSLQNDSAIKPT
TEISTPDHIQQNSNDELKKRLQSPISEPVNREENNAMSPNKEEKKENEEKNRKRKLDLVT
SLSTFTSGRSNSSETNQAQGNLSRNASTEPGTPRREKRPRKSETEDDYFYEWPYEDFSSS
EPENDDSGDEDFFCASKKKLLIKKSKDVGLASSRPMRQSSLRAASLLNEHREGSASDGDT
FPSRRLKKNSENERMDKKLREKKAKSRKISSESMSSENCNDDLNETLSPKKVESSASSGR
SKETKLKRKLKKLRRSKHELNKSQSDDSPVKKKRKKKNLTKSDSSESQSKKVKKEKNIEK
LNTSNQDGKKIKSPKKLRPQLEADVKSKKSLHKEIVCKTKSGESKSKSQSGISKSLIELY
TGPAKPCNELESPVQNRECSKQGNDLFGTEFTESEAAAFNQAFEAAKKELEIKEGAGTTL
PLHSNLQNETPIVTSPVVQAQSQQVQSEPLQQEVKQRKKPGRKPKHSKDNSALSPTKSSK
KHELKTETPKTHLKPKTENKSSLLPKSGARKGRPPGSSSIHKLREKQKAAIREAQQSKQE
CSQPIRPNTSVETTPAKNESLTSTPKVKEQPSHEAPSTSGFTTPSSVRKPPLFLKSSRPS
TPINAKERKLAFQSPLPPNLKKLTCNSAIGETVLHKAARHGYMENMKHYLESGFSVNAKD
NAGYTALHEACVQGRLEAAKLLLQFGADVNLNSLDGTRPIHDAVEYDHIEMTRLMMSCGA
DPLLSKFSGRSIKNMIRSTQMGNFINAYLKELQPVCEELMEDSDMKWKIPFSSVLESKQD
QGYDLMGNPPAEDTQAHCMEFELFDEQPIDTYLVQPSDTTDRSNYYLLNDILQVKGCSKA
DFLLEHCCNIRTMPTNKFCSEADLNKFGKRNRNFNETNSLIELVAADKPLTRHVGLRVHP
TGEVEEIPQFKKQKSSRLPPPVANDNVVKFLPKTTDTPTCSETPDQTRSNSNLLENLSDS
VIDDHREESLACLQKLTASFCMTGHIGKEYKDFGKVNGIHTPGTQTPVKKPRPPAMEVNL
PKTSTPNIEKNHKQNSDHIPMECLPPYNHHIEPKQPPKLPPLAPINTDSGLRSLPTQQNG
VDFSPFNKLPTFTESQNPVNTPNLVPEI
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcctactatgcaaccggtcgacaaccttcgccgaaacaaccaaaaagatttg
ccgaaaataccgaactatcagccggatcttaatcaaaggaatagaggcctttcaaacagc
tcagaaaactgggaccaatcagccagttatcgtcaaaacctcggtcaaagcagtgctagt
tctccgtcgttgttacgatttcgaaacgaccaaaattaccgaaacgaccacaatttaaac
actccaacaccaccaggccgaatgccgtgggagaacgacacgacccgaggtttagcaacg
caccatcgtcgtgcagatgctgtggatatgagcgtatctcggagacagaacgaacaacgt
caagaatcaatctccaggtcgctaccatcatctgtgcatccatctaaaccacactcttac
cgtcacccgcaaaacggggagcctccgctgttgtctacggtcaaaatgaaaggatacaaa
gacgatagaacgcctgactcaaacgcactcctggaggccgtaaaaacaagaaataatctc
gaaatcaaacaacttcttgagaagggtttggatgtaaactccactgagactggctacaca
gcaatgcatctggcctgcaaactgggatacatggacaccattgaatacttgcttatgtgt
ggagcagatattacgatcagagaccaacatggtcatcctgccggttattattccaagcca
aagggaattcctttagaagaaatgaaagcaaaaatccagcccaaaaagcgaagcaagccg
aatcagacactttcaatggaatggatgaacaatgtaaaatcaattcacggagaccacagt
ctagctggaacatctttatcagacgttcatggtttttcaaacctccctctcgggttaaac
agcggccaaacatttcattcatcagaccaccttagcactggaaagctatatgagccgcat
acttcatcagcttatcacatgccattgatgaagcattcaacgtcacatactgatttaaat
tcagtgtctgcacataaaagttcatatgacaattttccaagcccatttgactatcttccc
cggacaccacaaagcagttctagcttagaattgcttcgagattaccagaaatctagcgca
ctagagccttccccacactcaaattcacttcatttaaatggaaccaagtacccacaaaga
catgaaagagctaaactacactctccagcaaactttcaaacccagagagagcattctcca
atgccatcaagaccaagtccattcaaagggcatatgggtcatccaaaatatgaattctca
aacagaagtttggactataagcgacaagcaactgaatcaacatctccattcttggtaaat
gagttctcaaagtcatcttcaaggatcccaccctctacaaacactctttcatcctcgtat
gcattatctgcacaaatcaattcaccgttcagaacaagcttttacaaactaaacaatgtt
caaccagacaccagaattccagacacggcaatggcaaaccatttaaaactaggcacacca
ttctcctactaccctaacatgtacccaaaccgtgaaatcccctaccctatgttttacccc
ccattaatgccacctgggttggtacctggtatgtcaggataccctaacccaactgaaatc
ctaccccaccgtgctgaccatggctccttagtgcaaccatcacattataagccagatctc
caccatataccaatgccacagcaaccagcaattcaccaagtggaaaaaattccaccacac
acgattacaccatcatcaagtcacgatagtgggtcatcttataaaaatgggtggaaaccc
caggattctgttcacaatgatgcaaggaagagatcagagcaacctctcctgaagcaacaa
catcctgttgatcacgaggatcgtcggtgctccgagcatattcctccaaataactatgta
aaggaaaatcataaagttactgaacatgtaaatgggcaaaagcggacgacagcagacaca
gacatgcgcccttatatgcattcagttcatcccagtaacaaacatacaaataaccatcca
caaccaagaaccaatgaaaatgcacatagtcttcaaaatgattctgccattaaacctaca
actgagatttccacccctgaccatatacagcagaacagcaatgatgaactaaaaaaaaga
cttcagtcaccaatttcagagccagttaatagagaagagaataacgcgatgtcaccaaat
aaagaggagaaaaaagaaaatgaggagaagaaccgaaaaaggaaactggatctagttaca
agcttaagcactttcacaagtggccgttcaaacagcagcgaaacaaaccaagctcaaggt
aatctatcaaggaacgcttctactgaaccagggacaccacggagggaaaaacgaccaagg
aaatctgaaactgaggatgactatttttatgaatggccatatgaagatttctcgagctca
gagcctgaaaatgatgattctggtgatgaagacttcttttgtgcttccaagaaaaaactg
ttgatcaagaagagcaaggatgttggtcttgcatcctcacgtccgatgcggcaatcctct
cttagagctgcatcacttctaaatgagcatcgtgagggatcagcctcggatggcgacacg
ttcccaagtcgtcgcttgaaaaagaattctgaaaatgagagaatggacaagaaactgcga
gagaaaaaggcaaaatctcggaaaatatcaagcgagtccatgtctagtgagaattgtaat
gatgacttgaatgaaactttgtctccgaagaaagtggagagctctgcgtcctctggaagg
agcaaggaaacaaaactgaagaggaagttaaaaaaattaagaaggagtaaacatgagtta
aataaatcccaaagtgatgactccccggtaaaaaagaaaagaaaaaagaagaatttaaca
aagtccgacagcagtgaaagccagtccaagaaggtaaagaaagagaaaaacattgaaaaa
ttaaacacaagcaatcaagatggaaaaaaaataaaatcaccgaaaaaattgcggccacag
cttgaagctgatgttaaaagtaaaaagtcacttcataaagaaattgtctgcaagactaaa
agtggtgaaagtaaaagtaaaagccaatctggaatctctaaatctcttattgagttgtac
acaggacctgcaaagccatgtaatgagttagaatccccggttcaaaatagagaatgttca
aagcagggaaatgatctgtttggtacggagttcacagaatctgaggctgcagcttttaat
caggcatttgaagctgctaaaaaagaactggagataaaagaaggtgctggtacaacattg
ccactgcacagtaacttgcaaaatgagactcctattgttaccagtccagtagtacaggcc
caaagtcaacaagttcaaagtgagccactacaacaagaagttaaacagcgtaagaagcct
ggaagaaaaccaaaacattcaaaagataattcagcgttgtcgccaacgaaaagcagcaaa
aaacatgaacttaaaactgaaaccccaaagacgcatttaaaacctaaaactgaaaacaaa
agctctctattgccaaaatcaggagcaagaaaaggtcgtccacctggaagttcctcaatt
cataagttaagagaaaaacaaaaggctgctatcagggaagcccaacagagtaagcaagaa
tgtagccaacccatacgccccaacaccagtgtagaaaccacaccggcaaagaatgaatca
ttaacatccacaccaaaagtcaaagaacagccgagtcatgaggcaccgagcacttctggt
ttcactactccctctagtgttagaaaacctcccttgtttttaaagtcgtctcgaccgtca
acaccgataaacgcaaaagagcgaaagttagctttccaatcaccactgccgccaaatctt
aagaaattgacttgtaactctgctattggtgagactgtgttacataaagcagccagacat
ggctatatggaaaacatgaaacattatttagaaagtgggttctcagtaaatgcaaaggac
aatgctgggtatacagctttacatgaagcttgtgtacaaggaaggcttgaagctgcaaaa
cttcttcttcagtttggagctgatgtgaatcttaattccctagatggaacaagaccaatc
catgatgcggttgaatacgatcacatcgagatgactcggcttatgatgtcatgcggtgcc
gatccattactcagcaaattttcggggcgatccatcaaaaacatgattcgtagcactcag
atgggaaactttataaatgcttacttgaaagaattacaaccagtatgtgaggagctgatg
gaagattccgacatgaaatggaaaattccgttctcatcagttcttgagtccaaacaagat
caaggttatgatctgatgggcaacccacctgcagaagacacacaagctcattgtatggag
tttgaattatttgatgaacaacctattgatacatacctagtgcaaccttcagatacaaca
gatcgatcaaactattatctcttgaacgacattcttcaagtaaaaggttgtagcaaagct
gatttcttactggagcattgttgtaacattcgaaccatgccaactaataagttctgttcc
gaagctgatttaaacaagtttggaaaaagaaatcgaaatttcaatgaaacgaactcgtta
attgaacttgtcgctgctgataaaccactaacgaggcacgttggtcttcgggttcatcca
actggcgaggtggaagaaatcccacaatttaagaaacaaaaatcttctcgtttacctccc
cctgttgctaatgacaacgtcgttaaatttctcccgaaaacgaccgatactccaacctgt
tcagagacccctgaccaaaccaggtcaaactcaaatttgctggaaaatctaagtgattcg
gtgatagatgaccatagagaagaatcccttgcttgtctgcagaaactaacagcatctttc
tgtatgaccggccacataggaaaggaatacaaagactttggaaaggtaaatgggatccac
accccaggaacacaaaccccagttaaaaagcccagacctcccgccatggaagttaatcta
ccaaagacttcaactcctaatattgagaaaaatcataaacagaattcggaccacattcca
atggaatgtctaccaccctacaaccaccatatagaacccaagcaaccacctaagttaccc
cctttagccccaataaacacggacagtggtttacgttcgttacccacccaacaaaatggg
gttgatttctccccctttaataaactccccacttttactgaatctcaaaaccccgttaat
acccctaaccttgtcccagagatatga
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integrated database retrieval system
