Ciona intestinalis (yellow sea squirt): 100178664
Help
Entry
100178664 CDS
T01056
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100178664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100178664
03036 Chromosome and associated proteins [BR:
cin03036
]
100178664
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100178664
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100178664
PBAF complex
100178664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100178664
NCBI-ProteinID:
XP_002120971
Ensembl:
ENSCING00000007774
LinkDB
All DBs
Position
10:complement(4505266..4509527)
Genome browser
AA seq
425 aa
AA seq
DB search
MSRRSTRGTVDAISNLSVPPSASNHIAPSTMMYMNSQYNHPACNKLFLGPNLSRDGKSHG
SSTAVPKAPKAPEKPLMAYMRYSRKVWDEVKANQPDLKLWEIGKIIGKMWRELPSADKQV
YNAEYESEKGEYQELLKSYHNSPAYQSYLQAKGRAEAFEAESRAMERDDSCISIEPADDG
SGDTDEGFSVKHVAAARFQRNHRLMQDILTDPAVVPSGRGIVTQQRYDILKNQVQSLQKH
QSKLQTELVDIENNHAHTKRKWKDQGNKFTTEMKRLKTMTPQEFYAEFKKKEEQQKLLRE
EMERKNKEKMEAKAEEARKLAEKEKEEKKEEEEKKEEGKEEDEKKSESEDKMEVTTSEEA
VKDETEKKEETPTEDQPIDKTNETEETESKETNNEEQNEETKDEVSNTQTDIKSLEKNEE
EEKQV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacggagcacaagaggtacagttgatgcgatatcaaacttatctgtgccaccg
agcgcatccaatcacattgccccgagtactatgatgtatatgaacagccagtacaaccat
cctgcctgtaacaaactatttcttggcccaaacctatccagagatggaaaaagccatggt
tcttccactgctgtacctaaagctccaaaggcgccagagaaaccgctgatggcttacatg
aggtacagccggaaggtgtgggatgaagtcaaggcaaaccaaccagatttaaaactttgg
gaaattggaaaaatcattgggaaaatgtggagagaacttccaagtgctgataagcaggtg
tataatgcggagtatgaatcagagaagggtgaataccaagaactcctcaagtcctaccat
aactcccctgcttatcaaagctacttgcaagctaaaggtagagctgaggcttttgaagct
gagagcagggcaatggaaagggatgactcttgtatcagcattgaacctgctgatgatggt
tcaggggatactgatgaaggcttctcagtaaaacatgttgctgctgctcggtttcagcgt
aatcacagactcatgcaggatattttaaccgatccagcagtggttcctagtggtcggggc
attgtgacacaacagaggtacgacatattgaagaatcaagtacagtcgctgcagaagcat
cagagcaaactacagactgagttggttgatattgagaataaccatgctcacacaaagagg
aaatggaaggaccagggaaataagtttacaactgagatgaagaggcttaagacaatgact
ccacaggagttctatgccgagttcaaaaagaaagaggagcaacaaaagctactcagggaa
gagatggaaagaaaaaacaaagaaaagatggaggcaaaagcagaagaagctcggaagttg
gcagaaaaagaaaaggaggagaagaaggaagaggaagagaaaaaagaagaagggaaagaa
gaagatgagaaaaaatctgaaagtgaggataaaatggaggttactacaagtgaggaagct
gtgaaagatgaaacagagaaaaaagaagagacaccaacagaagatcaaccaatagataag
acaaatgaaacagaggaaacagagtccaaggaaacaaataatgaagagcaaaatgaagaa
accaaagatgaagtttcgaacacacagacggatataaaaagtttggaaaaaaacgaagaa
gaggaaaaacaagtttga
DBGET
integrated database retrieval system
