Ciona intestinalis (yellow sea squirt): 100179934
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Entry
100179934 CDS
T01056
Name
(RefSeq) plasminogen-like isoform X2
KO
K01312
trypsin [EC:
3.4.21.4
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100179934
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cin01002
]
100179934
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100179934
Enzymes [BR:
cin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.4 trypsin
100179934
Peptidases and inhibitors [BR:
cin01002
]
Serine peptidases
Family S1: chymotrypsin family
100179934
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100179934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
TSP_1
TSP1_spondin
Trypsin_2
DUF1986
TSP1_CCN
Mucin
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
100179934
NCBI-ProteinID:
XP_002126455
LinkDB
All DBs
Position
9:4110651..4118338
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AA seq
825 aa
AA seq
DB search
MAGIIRFLFFVFLFAALELQVDSTLEQKDVVSHCENVKDCDLCVYDYEIEFVQGCAVCKC
TSPIAREQRMATWKRWERWSECDRSCNFGTRTRVRRCRNGVVGGIGCIGPVFQNRRCRNK
RCPLYPGGECYDDTMPTEYRGKVSTAQPGLRCFRWNHQRSAYRPAAYPDSGLVGRYCRNP
DADPSGPWCYTNRLYTITATCLLPICKTDQDTYWSNWAGWSSCSESCGTGVQVRIRHCKG
GYITEGSCNGPVRQMRACEVEECTTTTTTPLPTTTTTTTTTTTTTTATTTTPLPTATLST
TTTTSMNAAYECVVNPRPTNYRGNISTTYRGMPCLPWNDPAIKTFNPTNFPNDDLVSNHC
RNPDGDLWPWCYFEFDAINGHKWTYCDVPECQPEPFIVPDLGCYDIEEPGSYLGSGSTTL
TGYQCQYWDANTPNAHIYHSYRHPDFVELGHHNFCRSPSGDFKPWCFSTNPDFRWEYCDL
EVCPSLSTTTRPTTTTTTIGPPPTTTRPTTATTRPTTTTTTTTIGPPLTTTRSTTTETST
TTMSSAASTTTIGPPVTTQSTTTRSSTENPEVCGKPAFPIIPNNNNKNQRIVGGFDANKG
SLPWMVTLRRYPSFSFFCGGSIIDKNWILTAAHCVENKPESYRGILGNYFNKMVDEEETI
VGFSSVHIHKSYNDNTLDNDIALLKVAEPIVFNDHVKPVCLPEYNAGVSYVPNTDVIISG
WGTLKSNGALSNALQQAYVDIVSLEECGKRYSSVFAPSVMCAGILDKGGIDTCQGDSGGP
LVDPNGNVQLGVVSWGRGCALAQYPGVYTLVSYYRRWLDNIRNNN
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtattatacggtttctgttcttcgtatttctgttcgcagcattggaattgcaa
gtcgattcaaccttggagcaaaaagatgttgtcagtcattgcgagaacgtcaaagattgc
gatttatgtgtgtacgactatgagattgagtttgttcagggttgtgcagtttgtaaatgt
acatcacccatagcaagagagcaacggatggcgacctggaagagatgggaacggtggtcg
gaatgcgatcgatcttgtaactttgggacaagaactcgtgtgcggcgttgtaggaatggc
gtcgttggtggtattggttgcattggacctgtgtttcaaaatcgaagatgtagaaataaa
agatgtccgctatatccgggcggtgagtgctatgacgataccatgccaacagaatacaga
ggaaaagtttccactgctcagccaggattacgatgttttaggtggaaccaccaacgatca
gcttatcgtcctgctgcatacccagattccggcttggttggtcgttattgtagaaacccg
gacgcggatccaagcggaccatggtgttacacaaatcgattatatactattacagcaacg
tgtttattaccaatatgcaaaactgaccaagatacttattggagcaattgggctgggtgg
tccagctgctctgaaagctgtggcactggagttcaggttcgcattcgacattgtaaagga
ggttacattacagaaggatcttgtaatggtccagtgagacaaatgagggcatgcgaggta
gaagaatgcacaacgacgacaacaacaccgctcccaacaacaacaacaacaacaacaaca
acaacaacaacaacaactgcgactactaccacccctttaccaacagcaactctatccaca
acgaccaccacatcaatgaacgctgcatacgaatgcgttgttaacccacgacccacaaat
tatcgaggcaacatcagcacaacgtatcgtgggatgccttgtcttccgtggaatgatcca
gctataaagacatttaaccccaccaactttccgaacgatgatttagtttcaaaccattgt
cgaaatccagacggtgatttgtggccgtggtgttatttcgagttcgatgcaatcaatggt
cacaaatggacatattgcgacgtaccggagtgccagccagaaccttttatcgtgcccgat
ctcggttgctacgatatagaagaacctggaagttacctcggttcagggtccaccactctc
actggttaccaatgccaatactgggacgccaacaccccaaacgctcacatatatcattcc
tatcgccacccggattttgttgagcttggccaccataacttctgtcgatcaccgagcggt
gacttcaagccttggtgtttctctactaaccctgactttcgatgggagtactgcgacctc
gaagtttgcccttctctatcaacaacaacaagaccaacaacaacaacaacaacaatagga
ccaccaccaacaacaacaagaccaacaacagcaacaacaagaccaacaacaacaacaaca
acaacaacaataggaccaccactaacaacaacacgatcaacaacaaccgaaacatccaca
actacgatgtcgagcgcagcatctactacaacaataggaccgccagtaacaacccaatca
acaacgactagaagttcaacagaaaaccctgaagtttgtggaaaaccagcttttccgatt
attccaaacaacaacaacaaaaaccaaagaatcgttggcgggttcgatgccaacaaaggt
agtctgccatggatggtgacccttcgtcggtatccaagcttctcatttttctgcggcggc
tcgattatcgataaaaactggattctcactgctgcccattgtgttgaaaacaaaccagag
agctaccgaggtattctcggaaactactttaacaaaatggtggacgaagaagaaacaata
gtcgggttttcgtctgtgcatattcataaaagttataatgacaatacgttggataacgat
attgctttgctgaaggttgctgaacccatagttttcaacgatcacgtcaaaccagtttgt
ttaccagagtacaacgctggtgtttcatatgtaccgaatactgatgttattatcagcggg
tgggggactttaaagtcgaatggtgcattatcaaacgcactgcaacaagcctatgtagac
atagtgtccttggaagagtgcggtaaacgatacagctcggtatttgcacctagcgtaatg
tgcgctggaatacttgataaaggtggaattgacacttgtcagggcgacagcggtggacct
ttagttgatcctaacggtaacgtccaactgggtgtcgtttcttggggtagaggttgtgca
ttggcgcaatacccaggtgtttatactttggtctcctactatcgtaggtggttggacaac
attcgtaacaacaactag
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