Ciona intestinalis (yellow sea squirt): 100179935
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Entry
100179935 CDS
T01056
Name
(RefSeq) high-affinity choline transporter 1 isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100179935
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
100179935
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
100179935
NCBI-ProteinID:
XP_002119499
Ensembl:
ENSCING00000004257
UniProt:
F6YFU4
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Position
14:complement(3972269..3977568)
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AA seq
545 aa
AA seq
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MAVNVPGLVSIIVFYVLILAIGIYAAWRKRRTGRGNESETIMVGGRDIGLFVGSFTMTAT
WVGGGYINGTSEYVYTPGSGLLWTQAPIGYACALILGGLFFAKKMRSEGYVTMLDPLQRK
LGRVMGAFLYIPALAGELFWSAAILAALGGTLHVIIDLHITAAVIVSACIAVVYTMVGGL
YSVAYTDVVQLICIFIGLWLSIPFAFTHPAVSDIATTAYHSPNWLGTWDISTTGLWIDSA
LLLLFGGIPWQVYFQRVLSSKSAGSAQKLSFIAAFGCMFMSIPSILIGAIAASTDWNATS
YGLPSPVEKGDQANILPIVLQYLTPVAVSFFGLGAVSAAVMSSADSSILSASSMFTRNIY
NVVIRPKASELELVWVMRVAIIFIAAGATALALVVKSVYYLFYLCSDLIYVILFPQFVSV
LYLDPNTYGSILAFLVGLVLRLGGGEPGFGFQPFIKYPYGSNFPFKTLAMVSSIVTLLVV
SYFVRFLFVRGIIPARYDFLKCNLANGGRSIETHENKVARRDMEMSGHGLQNEGYVPETE
EKTKM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaacgttcctggtttggtttccatcattgtgttttacgttcttattctagcg
atcggtatttatgcagcatggaggaaaagaagaaccggaagaggaaacgagagcgagaca
atcatggtcgggggaagagacatcggactctttgttggaagctttactatgactgctacg
tgggttgggggtggctacataaacgggacatcggaatatgtatatacacctggctccgga
ctcctgtggacgcaagcacccattggatacgcttgcgcgttaatacttggcggcttattc
tttgcgaagaaaatgcgaagtgagggatatgtgacgatgttggatccattgcagcgcaag
cttggtcgagtaatgggagcgtttctttatatacctgcacttgctggagaattattctgg
tctgcagctatattggccgcgttgggcggtacgcttcatgttatcattgatcttcatata
actgcagctgtaattgtatctgcatgcattgctgttgtatacaccatggtcggaggtctc
tactcggttgcttatacagatgtagttcagttgatttgcatattcattggactgtggttg
agcattccattcgcgttcactcatcctgctgtatcagacatcgccactacagcttaccac
tcacctaactggcttggtacttgggatatttcgaccactggtctatggatcgactctgct
ctgctactgttatttggtggaataccgtggcaagtttactttcaaagagttttatcgtcg
aaaagtgcaggaagcgctcagaagctttcattcattgctgcattcggatgtatgttcatg
tcaataccttcgatattaatcggtgcaattgctgcatctacagattggaacgcaacatcg
tacggcctcccaagtccagttgaaaaaggcgaccaagctaatattctgccaattgtgctt
caatacctcacccctgtagctgtatcattctttgggcttggcgctgtttctgctgctgta
atgtcatctgccgactctagtattctatctgcttctagtatgtttactaggaatatttat
aacgtcgtcatccgaccaaaggcatcggagttggagctggtgtgggtaatgagagtagca
ataatattcatagcggcaggagccactgctttagctcttgttgtgaaatctgtttattat
cttttctatctttgttcggacctgatctacgtcatactttttccacagtttgtaagtgtt
ctctacctggacccaaatacgtatggatcgattcttgcttttctggtgggtttggtttta
cgacttgggggtggcgagcctgggtttgggtttcaaccttttatcaaatacccatatgga
agcaactttccatttaaaacactcgcaatggtatcttccattgtaactctgctggttgtt
tcctacttcgttcggtttttatttgtccgtggtataataccagcgagatacgatttcttg
aaatgcaatcttgcaaatggcggccgtagtattgagacacatgagaacaaagttgcacga
agagatatggaaatgagtgggcacggtttacagaatgaaggttacgtgcccgaaacagaa
gaaaaaacgaaaatgtaa
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