Ciona intestinalis (yellow sea squirt): 100180136
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Entry
100180136 CDS
T01056
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L-like isoform X1
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100180136
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
100180136
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100180136
NCBI-ProteinID:
XP_026692528
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All DBs
Position
11:4531405..4542463
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AA seq
447 aa
AA seq
DB search
MSFEEHQVKRRRLSENGSELKQQEDFSSHEPPHERPDRENKFSREREMADQPNKVLLFTV
VNAVYPITTDVLHMICEPCGEVQRIVIFRKRGVQAMIEFGSIQDAQRAKASLNGADIYSG
CCTLKIEWAKPARLNVYKNDDETWDYTGAVDEPNMPMQQPALLGDAPAGFSNPPPYRTGQ
RMPVPAQRGRGGMRGRPPVLHARPRRPNPPLMNTNVHQMPNEYMGEDYGPPMDGNTTVLM
VYGLNPEKMTCDRVFNILCLYGNVMKVKFLKSKPGTAMVQMGDPSAVGRAISNLSGMKFF
DEKLVLAPSKQLYLTDTGPVGDLPNGTPAQVDFGNSRNNRFQTNEQAAKNRIQNPAKVLH
YYNAPLELNEEKMKEICQEFDLALPVKFTPFKTRSERSSSGLMEFDTKAQAMEVLTYINH
YKLDNPAGRFPYILKLCFSTASTATRD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgaagaacaccaagtaaagcgtagaaggctgagtgaaaatggttcagaactt
aaacagcaagaagacttcagctctcatgagccaccccatgaaaggccagatagggagaat
aaattttcacgagagcgcgaaatggcggaccaaccaaataaagttctcctgttcactgtg
gtcaatgcagtttacccaatcaccacggatgttttgcacatgatatgtgaaccatgcgga
gaagtccaaaggattgttatattcaggaaacgtggagtgcaagccatgattgagttcggt
tcaatccaagatgcacagcgggcaaaagcttcgctaaatggagccgacatttactctggt
tgttgcaccttgaagattgaatgggcaaagccagcaagattaaatgtttataagaatgat
gatgaaacttgggactacacaggagctgttgacgaacccaacatgccaatgcagcaacct
gcattactgggcgacgcccctgctggtttctccaacccaccaccttatagaacagggcaa
aggatgccggtccctgcacagcgtggaaggggaggtatgaggggaagacctccggtgttg
catgctagaccccgcagaccaaatcctcctctgatgaatacaaatgttcatcagatgcca
aacgaatacatgggggaggactatgggccccccatggatggcaacacaacagttctcatg
gtttacggacttaaccctgaaaaaatgacttgcgaccgagttttcaatattttatgtttg
tatggcaatgttatgaaggtgaaattcttgaaaagcaaaccaggaacagccatggtacag
atgggagatccaagtgcagtagggcgggcaatttcaaatctatcaggaatgaaatttttt
gatgagaaacttgtacttgcaccatcaaagcaactttatctaacggacactggaccagtt
ggtgacctccctaatggaacgcctgctcaagtagattttggaaactcaagaaacaacagg
ttccaaaccaatgaacaagctgctaagaaccgaatacagaacccagccaaggtattgcat
tattacaatgctccacttgagttaaatgaggaaaaaatgaaagagatatgccaagagttt
gatttggcacttcctgtcaagtttactccatttaagacaagaagtgaacgcagctcatct
ggtttaatggagttcgatacaaaagctcaggccatggaagtattgacgtatatcaaccat
tataaactggataatccagccggcagattcccttacatactcaagctttgtttctcaact
gctagcacagcaacccgagactga
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