Ciona intestinalis (yellow sea squirt): 100180214
Help
Entry
100180214 CDS
T01056
Name
(RefSeq) integrin beta-1-A-like isoform X1
Organism
cin
Ciona intestinalis (yellow sea squirt)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
100180214
NCBI-ProteinID:
XP_009860486
Ensembl:
ENSCING00000006316
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MERIKLFMLFAVLVVYSTQVSGQSTTDIDKLCEDTAITSCDQCIRKHPQCAWCSRTSDNS
NIKRCRSYTKTLQASACATADITMPRSDVIFQKNLPFSSRDDINVVQLRPQNININLRKG
DTVKFNVTFRKVKDYPVDLYYVMDLSNSMKDDLAELQKLGARLAEEIRQNVTSDINMGFG
TFVDKVMMPFTSTVPDQLKNPCVKADEFCSAPFGFRHQQPISGDLTAFKESVQNTNISGN
IDSPEGGFDALMQIAVCGNKIGWRESASHLVVFTTDASFHTALDGKLAAILDANDMQCHL
TKVNSSVDSNVYVYDKSKELDYPSIGQLRAAFVANKIQPIFAVTKEVRSLYDGLKSLIPN
SFVDELANDSNNIISIIKTAYNKLKEKLQMSLDDDNKPTGVGISYRTLCPTAGGWAENSL
SCDQIKIGSEVTYEFTISASSCPATLPSQPMTFTSSSLQEFVKFNFNFLCDCNCSSMAEV
DSPSCSTNGSLVCGACLCNDGHEGSRCQCTQSTIGLSLNAQCKRSDTADICERNGRCVCG
VCDCDENYHGKYCQCTNTGCPVTDGNVCGVGGKCENCYNQPKCNCTSKNGIPYTLDNVGS
CTCHESECIDQRSNNTMVCSGNGNCSCSSCICDPKYDGIYCQHCNSPSCKTITAECSSHE
ACAICVNAAVQNRENANDLCQVQCKDVTFQTVKAIPDCSVCTANSGVTCPSDCADVDPSV
LTPTPCSQAQSTGQCKVSYNIVWKKSLRNYLVLIKEFDQAIDCPKPINPLVIVLPIVAGI
VILGLIALVAWKVYQTWRDKREWKVFENEMKKSKWTKDINPVFQKPKTRFENPAYGGDEQ
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaataaagttgtttatgttgtttgctgtgttggttgtatattccacacaagtg
tcaggacaaagtaccaccgatatcgataaattatgcgaagacacggcaataacatcatgc
gaccaatgtatacgaaagcatccacagtgcgcttggtgcagtcgaacaagtgataactcg
aatattaagcgatgtagaagttacacaaaaactttacaagcaagcgcgtgtgcgactgct
gacatcacaatgcctagaagtgacgtcatattccagaagaacttaccgttcagttcccgt
gacgacatcaatgttgttcaacttcgtccgcagaatattaacattaatttacggaaaggc
gacacggtgaagttcaacgtgactttccgcaaagtcaaggattacccggttgatctttat
tacgtcatggacctctcaaactcgatgaaggatgatttggcggagttacaaaaacttgga
gcaaggttggcggaggagattcgacaaaacgtcacaagcgacatcaatatggggtttggc
accttcgttgataaagttatgatgccgttcaccagcactgtacctgaccagttgaagaac
ccgtgcgttaaagctgatgaattttgttccgcaccttttggctttcgtcatcaacaaccg
atatctggcgacctcacagcgttcaaggagagcgttcagaacaccaacatatccggcaac
atcgattcccccgagggtgggttcgatgccttgatgcaaatcgctgtgtgcgggaacaag
atcgggtggcgagaatcggcttcgcatctcgtggtgttcacaactgatgcgtccttccat
acagcattggacgggaagttggccgccatattggatgcgaatgatatgcagtgtcacctt
actaaggtgaactcgagcgtcgacagcaacgtttatgtttacgacaaaagcaaggagttg
gactatccatccatcggccaactacgcgcggcgttcgttgcgaataagattcaaccgata
ttcgctgtaacaaaggaagtcagaagcctttatgacggtttgaaaagtctcattccaaac
tcgttcgtcgatgaattggccaacgactccaacaatattatctccattataaagacggct
tacaataaactgaaggagaagttacaaatgtcgctcgatgacgacaacaaaccgacaggg
gttgggatatcgtacagaactttgtgcccaaccgctggtgggtgggctgagaatagttta
agttgcgaccagatcaagattggaagcgaggtgacttacgagttcacaatatccgcatca
tcttgcccggccaccctcccatcacaaccaatgacgtttacgtcgagttcacttcaagaa
tttgttaaatttaacttcaacttcttgtgcgattgcaactgctccagcatggctgaggtt
gacagtccaagttgcagcaccaatggttcccttgtatgcggagcatgcttgtgtaatgat
ggacacgaaggttcaagatgtcaatgcacgcaaagcaccatcgggttgtcgctcaacgcc
caatgtaaacgaagcgacaccgctgatatttgcgaacggaatggtcgatgtgtttgtggt
gtttgtgattgtgatgaaaactaccacggtaaatactgtcaatgtaccaatactggatgt
ccggtcaccgatggcaacgtgtgcggtgttggtggcaagtgtgagaattgttacaaccaa
cctaagtgtaactgcacctccaagaatgggattccatacaccttggataacgttggttca
tgtacttgccatgaaagtgaatgcatcgaccagaggagcaacaacacgatggtttgcagc
gggaatgggaattgttcatgcagtagttgtatttgtgaccctaaatacgatggtatatat
tgtcaacattgcaacagtccatcgtgcaaaaccatcaccgctgaatgttcgtcccatgaa
gcttgcgctatatgtgttaacgctgctgtgcagaaccgagagaacgccaacgatttatgc
caagttcaatgtaaagacgtcaccttccaaactgtgaaagcgattcccgattgttcggtt
tgtaccgctaatagtggtgtgacgtgtccatctgattgtgctgacgtcgatccttctgta
ttgaccccaactccatgctcccaagctcaatcaaccggtcaatgcaaggtctcttacaat
atcgtgtggaagaaatcacttcgtaattacctggtgttgatcaaagaattcgaccaagct
attgattgcccgaaaccgatcaacccgttagttatcgtcctccccatcgtagccggcatc
gtcatccttggcttgatcgcccttgtagcttggaaggtttaccaaacttggagagataag
agagaatggaaagttttcgagaacgagatgaagaaatcgaagtggacgaaggacattaac
ccggtgttccaaaaacctaagactcggtttgagaatccagcgtacggtggggatgaacaa
taa
DBGET
integrated database retrieval system
