Ciona intestinalis (yellow sea squirt): 100180296
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Entry
100180296 CDS
T01056
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC100180296
Organism
cin
Ciona intestinalis (yellow sea squirt)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DOMON
Trypan_PARP
SEA
EGF_2
EGF
Motif
Other DBs
NCBI-GeneID:
100180296
NCBI-ProteinID:
XP_026690159
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Position
4:4610489..4619852
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AA seq
1158 aa
AA seq
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MDYIRCILLLTLYNLCYGHVRLTYPPARQYELDFLDNARTRGPCGFPPNPNERRTTFVEG
SEINVTWHLAYSHRGGIQVQVIRDRPGLRFRVLADLTGRRFAFNNDSTLQSVTVSLPRGL
VCDSCTLRLLRQASEWSSSYMFWSCSDITIIPRQPNLCFDGKCLNQGWCNTTSGNCNCPR
LYTGNRCQYKDECWSDRDCSNNGQCIDTRSTTYPKLVCYCNPGWLGTQCNKESQLPEVPE
LSNNNGYTMFNLSPGNVRLYLKYLQDSAEVEIAVEARTHSWVGIGWRPLNQVGCRLIPAL
RNDQARFEEIVTVRKSTASAHIDPEKQIEDALVSTMSTNCGTGLVERPSGEPDPTSEPEP
SGEPEPTSEPEPTSEPEPTSEPKPSVEPEPYGEPEPSSEPEPSGESEPTSEPEPPVEPEP
TSEQEPHVEPEPSSEPEPSSEPEPSSEPEPPGEPEPSVEPEPSGGPEPSGEPEPSVEPEP
FGEPEPSGEPEPSVEPEPSVEPEPFGEPEPSGEPEPSVEPEPSDEPXPDGEPEPSVEPSG
EPEPTSEPEPSGEPEPSGEPEPSVEPEPSGGPEPSVEPEPSGGPEPSGEPEPSSEPEPSG
EPEPSGFGGSSQTLRLHPMDCTDIIIGSVKGNLLRVEDSYTRDRSTPRRDKVYGGRDDII
AAAGSQVDGWTTVIVRKKAVATHFTDHSILFEPMHFIWAKGQEVGQYVHTPASGIEACTA
TDYRFYRHDELKYHGTSITQRGFATINLNSLNQPLATAPTTTPPVQCSTKSGVLKMPLNC
HCGKAFNCLYHISWSLTNDVITFTLKSRTQGWLGIGISDDRFMPNTDVYVGWIDANGNTV
VQDRWANGRFEPAIDEEQNIVNVSGNYSNGVTTIQFSRLRDTLDVGSDLSFTDTECRHIL
FASGTVLGDQIMYHQFRYQVTTSKLCIRECMSTTTTTQTTTMETTTAGTTTRTETNIGTE
PVIHRHGLVGNSTTRMVTFTGGFRVINYSYEPTYMVPGSSQHTRLKEQFEHDINATYYAT
RLVKERFLKVLNITVMKLTRGVRNKLFVEYTAQTVISSRFKSLGQLQTELVYTFKEAVLV
NRGLFGGNGHQLDPQSIKAIVFRTWEELRDYPDLASLDVSLLSDDSSMTSQSIDIAIGAG
LGGGLVWFVAYLLYRKFM
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggattatattcgctgtatcttgttgcttacattatataacctgtgttatggccacgta
agactaacgtacccaccggcaaggcaatatgaattggattttctggacaacgcaagaaca
agaggcccatgcgggttcccacccaatcctaacgaaagacgaactacgtttgtggaaggc
tcggaaataaacgtgacgtggcacttagcgtattcacatcggggcggtatacaagtacaa
gtcatacgagatagaccagggttaagatttcgagtcctggcagaccttacaggaagaaga
ttcgcttttaacaacgattcaacacttcaatctgtgaccgtctcgcttccacgcggactt
gtgtgcgactcctgcacgcttagattactaagacaagcctctgaatggagttctagttac
atgttttggagttgttcggatattactattataccaaggcaaccaaatctttgctttgat
gggaaatgtttaaaccaaggatggtgcaacacgacatctgggaactgcaactgcccacgc
ctatacacgggcaatagatgccaatacaaagacgaatgctggtcggaccgcgactgcagc
aacaacgggcaatgtatcgacacaagaagcacaacataccctaagctcgtgtgctactgt
aacccaggatggctgggaacacaatgcaataaagaatcacagctcccagaagtgccagaa
ctttccaataacaacgggtataccatgttcaatttaagtccagggaacgttagactgtat
ttgaaatatctacaagattcggctgaagtagaaatagccgtcgaggcaagaacacacagc
tgggttggaattggttggagacctcttaaccaagtaggctgtcgtttaataccagcgctg
aggaacgaccaagctcggtttgaagaaattgtaactgtgaggaaatctactgctagtgcg
cacatagaccctgaaaaacagattgaagacgcgttggtatccacgatgtcaacaaactgt
ggtactggtttagtagaacgaccatctggcgaaccagatccaacaagtgaaccagaacca
tctggcgaaccagaaccaacaagcgaaccagaaccaacaagtgaaccagaaccaacgagt
gaaccaaaaccatctgtagaaccagagccatatggtgaaccagaaccatctagtgaacca
gaaccatctggcgaatcagaaccaacaagtgaaccagaaccacctgtagaaccagaacca
acaagtgaacaggaaccacatgtagaaccagaaccatctagtgaaccggaaccatctagt
gaaccggaaccatctagtgaaccagaaccacctggtgaaccagaaccatcagtagaacca
gaaccatctggtggaccagaaccatctggtgaaccagaaccatcagtagaaccagaacca
tttggtgaaccagaaccatctggtgaaccagaaccatctgttgaaccagaaccatcagta
gaaccagaaccatttggtgaaccagaaccatctggtgaaccagaaccatctgttgaacca
gaaccatctgatgaaccangaccagatggagaaccagaaccatcagtagaaccatctggt
gaaccagaaccaacaagtgaaccagaaccatctggtgaaccagaaccatctggtgaacca
gaaccatctgttgaaccagaaccatctggtggaccagaaccatctgttgaaccagaacca
tctggtggaccagaaccatctggtgaaccagaaccatctagtgaaccggaaccatctggt
gaaccagaaccatccgggtttggtggaagttctcaaacactaagattacacccaatggat
tgtacagacatcattatagggtctgttaaaggaaacttactgagagttgaggactcttat
acaagagatagatctacaccaagaagggataaggtttatggtgggcgtgatgatattata
gctgctgctggatcacaagtggatggatggacaactgtcattgtgaggaagaaagctgtg
gccactcattttaccgatcactctattctgtttgagccgatgcattttatttgggccaaa
ggccaggaggtcggccaatatgtccacacacccgcatcagggattgaagcttgcacagct
acagattacaggttctaccgccatgatgaacttaaataccatggcacatccatcacacag
cgaggttttgcaacaattaatctcaatagtttaaaccaacctctggccacagcacctaca
actacaccaccagtacaatgttcaactaaatctggtgtgttaaaaatgccattgaactgc
cactgtgggaaagctttcaattgtttgtatcatatatcttggtcacttacgaatgatgtc
atcacatttacattaaagtctaggacacaaggatggcttgggattggcatcagtgatgac
cgtttcatgccaaacactgatgtatatgttggctggattgatgcaaatggaaacactgta
gtacaagacagatgggcaaatggaagatttgagccagccatcgatgaagaacaaaatatt
gttaatgtcagtggaaattactccaacggagttaccacaatacagttctcacgattgcgc
gatactttggatgttggcagcgacttatcctttactgacaccgagtgtcgacacatttta
ttcgcatcaggaacagttctgggagatcagataatgtatcatcaatttagataccaagta
actacgtctaagctctgtatacgtgagtgcatgtctacaactacaacaactcaaacgact
acaatggaaacaaccacagcaggcacaaccacaagaacagaaacaaacattggaactgag
cctgtaatacacagacatggtttggtgggaaacagcacaacacgtatggtcacattcaca
gggggatttagagttatcaattactcatatgaaccaacatacatggtccctggatcatcg
cagcatacaagactgaaagaacaatttgaacatgatatcaatgcaacatattatgcaaca
aggcttgtcaaagaaagatttctcaaagttttgaacattactgtcatgaaattaacaagg
ggtgtaagaaataagttgttcgtagagtacacggctcaaactgtcatatcttcaaggttt
aaaagtcttggtcaactgcagacagagttggtttatacattcaaagaagcagtgttggtc
aacagaggtttgtttggtggaaatggccaccaattagatccacaatcaataaaagcaata
gtgttcagaacctgggaggagctaagagactacccagacctagcatcactagatgtctcc
ctacttagcgatgattcatctatgacatcacaaagcattgacatcgcaattggcgcagga
ttgggaggggggttggtgtggtttgttgcttacctgttgtacagaaagtttatgtga
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