Ciona intestinalis (yellow sea squirt): 100180321
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Entry
100180321 CDS
T01056
Name
(RefSeq) probable global transcription activator SNF2L2
Organism
cin
Ciona intestinalis (yellow sea squirt)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
HDA2-3
SNF2-rel_dom
DUF5946
Motif
Other DBs
NCBI-GeneID:
100180321
NCBI-ProteinID:
XP_026694843
Ensembl:
ENSCING00000009221
LinkDB
All DBs
Position
Unknown
AA seq
1437 aa
AA seq
DB search
MQAPPPENQLQSPASSNAQAPPTNAPPGSNHLPQTGVNQAPGGAALSTAPPPAVPQDPNQ
LPQSQSYSQYPQHNQVGYPHREDLAPHQQHPPQHHPMPTPVPGHPLPVNDTRPPSSQYPA
PTPPQASYQTPTSFTHNQPQPTYPDSAPSSYPQTQQQPGYPAPPNHPQTYPPGNQTPSTY
PANPTQPGYPGTPNPPSSGYPQGPSGPQGGYSAPGQYPAYPPSQYPPTSDPSYMAPHPES
YSADNIAGMKQAIDSMSAKGLTNDPRYHQLVHMLQQAKQREAAAPQQSGPPPPAESSSMA
PSNVYGSSNRAQPYPAVSGSPDTRVNPTPPATGQPGDPTKPPTDPKSAFSQVQLYQLRAQ
IVAYKMLARQQPVPEQLMNAIGKRLPVNASQNPPSSTSNQAPATTEATPTPEPPKLTSTT
PKPEGTTPDATQSPAKASPAAPPPPQDLASLLQMPPKTSKITPIKKPEGIDPNLLLLERE
NRIEARIAQRISELQSVPANIPDDLRMKATIELKALRMLGFQKQLRQEVLGAMRRDTTLE
TALNAKAYKRVKRQTLREARLTEKLEKAQKLEADKRRKQKHHDFLQSVLQHAKDFKEFHR
NVAAKTNKIHKAILLYHANTEREQRKEEERIEKERMRRLMAEDEEGYRKLIDAKKDKRLA
YLLGQTDEYIRNIVKLVKEHKFALAKKKGKRKKKKTEEEQSNDVDRHVAVKNTETGEVLQ
GEKAPKFSNLDAWLDMHPNFQVAPRVESEDEEEEEEEEPQKEEEVKEEEKVTEEEPNLDI
TKAEIDDEYTTYDTSTYYAVAHNINETITEQSNMLKNGKLKAYQVSVSNYYVPNNLIFIK
PASNVASSSTGKQGKGGAKALMNTIMQLRKICNHPFMFRHIEESMAEFLQIPGGIVTGPD
LYRVCGKFELLDRVLPKLKKYNHRVLLFCQMTSTMTILEDYFAYRGHKYLRLDGSTKADD
RGLMLQKFNAPNSDIFIFLLSTRAGGLGLNLQSADTVIIYDSDWNPHQDIQAQDRAHRIG
QTNEVRVLRLMTVSSVEEKILAAARYKLNVDEKVIQAGMFDQKSTGSQRRAKLFELVQRS
TTDEDEDEVHDDETLNQMIARTEHEFDSFQQMDIDRRRTEARDPNRKPRLMEEDELPSWL
LASADDVERLTQEEADDKLFGRGSRVRKEVDYSESLTDKEWLRAVEDGVDVDELEEQKRY
KKQRKRRRGEEEDKAGPSSVKKKRGRPPMEKPTPNPPKLTKQMKRIIDHVIKYTDSTGRR
LSDPFLQLPARKELPDYYEMIKRPVDIRKIRERIKLHKYRSFDDLERDFQQMCLNTQTYN
VEGSLIFEDSIKLNTVFTYAREMLEKSDTLPPDPSDNDDSINIADEDSRATRHSVSPQGS
DDERDSDDEPLRVKIRLSKEEQEAPKKRKSGSRRKVISDDDDGDDDSNYEESNDEDS
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgccaccaccagaaaaccaacttcagtctcctgcctcttcaaacgcacaggcc
cctcctacaaatgccccacctgggtccaaccatttaccccaaactggggtaaaccaagct
ccagggggtgctgcactttcaactgccccacctcctgcagttccccaagaccccaaccaa
cttccgcaatcacagagttactctcaatacccacagcataaccaagttggatatccccat
cgtgaagatcttgctccacatcaacagcatccaccacaacatcacccaatgcccacacca
gtacctggacacccattaccagtgaacgacacccgccccccttctagccaataccctgcc
ccaacgccgccccaagcatcttaccaaacccctaccagttttacccacaaccaaccccaa
cccacctacccagattcagccccatccagttacccgcaaacccagcagcaacctgggtac
cctgccccaccaaaccacccacaaacatacccacctggtaaccaaaccccatcgacatac
cccgccaatcctacccaacctggatatccaggaacccccaaccccccatcttccggttac
ccacaaggaccctcaggcccccaagggggttattcagcacctggccagtatcctgcttac
cccccaagtcagtacccaccaactagtgatccaagctacatggctccccacccagaaagc
tactctgctgacaatattgctggcatgaaacaggccattgattccatgagtgcaaaaggg
cttacaaacgatccacgttaccaccagttagttcacatgcttcaacaagcaaaacaacga
gaagcagctgcacctcagcaatctggaccaccacctcctgcagaatccagtagcatggcg
ccaagcaatgtttatggcagttcaaaccgtgcccaaccataccctgctgtaagtggaagc
cccgatacacgtgttaaccccacaccccctgctacgggccaacctggtgaccccaccaag
ccccccactgacccaaagtctgcgttctcacaagtacaactctaccaacttcgtgcacag
atagtcgcatacaagatgttagcacgccaacaacctgtacctgaacaactcatgaatgct
atcgggaaacgactgcctgtaaatgcgagccaaaaccccccaagttcaacctcaaaccaa
gcccctgcaaccacagaagctacccctactccggaaccccccaaactcacttctacaacc
cctaaaccggaggggacgacacctgatgctacccagtctccagccaaggcatctccagct
gctcctcctcctccccaggacctcgcctctctcctccaaatgcctccaaagacgagcaag
atcactcccatcaagaaaccggaaggcatcgatccgaaccttttacttctggagcgagaa
aacagaatcgaagccagaattgctcagcgtataagtgaattacaaagtgtgccggcaaat
ataccagatgatttaagaatgaaagcaaccattgaattgaaagcacttcgtatgctgggt
ttccaaaaacaacttcggcaagaagtgcttggagctatgagacgtgatactacattggaa
actgcattgaatgcgaaagcatacaagcgtgtgaaacgacaaaccctacgtgaagctcgg
ttgactgaaaaacttgagaaagctcagaaattggaagctgacaagagaaggaagcaaaaa
caccatgatttcttacagagtgtgttgcagcatgctaaggatttcaaagaatttcatcga
aatgttgctgctaagacaaacaagattcacaaagcaatcctgttatatcatgctaacact
gaacgtgagcaaagaaaggaggaagagagaattgaaaaggagagaatgaggagacttatg
gcggaagatgaggaaggctacaggaagttaattgatgcaaagaaagacaagaggctcgct
tatcttcttggacaaacagatgaatatattcgaaatatcgtgaagcttgtcaaggagcat
aagttcgctctcgctaagaagaaagggaagagaaagaagaagaaaacagaggaggagcag
agcaatgatgttgatcgtcacgttgccgtgaagaacacggagacaggagaagtcctccag
ggagaaaaagctccaaagttttccaacctcgatgcatggcttgatatgcatcccaacttc
caggttgctccaagagttgaaagtgaggatgaagaggaggaggaggaggaggagcctcaa
aaagaggaagaagtgaaagaagaggaaaaagtgacggaggaagaaccgaaccttgatatc
acaaaagctgaaatagatgatgaatacaccacttatgacaccagcacatattatgcagtt
gctcataatattaatgaaactataacagagcaatcaaatatgcttaagaatgggaagctc
aaagcttatcaggtgagtgtgtcaaattattatgtcccgaataatctgatttttattaag
cctgcatccaatgttgcgtcctcatccacagggaagcaaggtaaaggaggagcaaaagct
ttgatgaacacgatcatgcagctacggaagatatgcaaccatccattcatgttcagacat
attgaagaatctatggctgagtttcttcaaatacccggtggtattgtgaccgggccagac
ctgtaccgtgtatgcggtaagttcgagttgctcgatcgagtgttgccaaagttgaagaaa
tacaaccaccgggtgctgctgttttgtcaaatgacgtcaaccatgacgatattagaagat
tattttgcttatagaggtcacaagtacttacgactggacggatcaacgaaagctgacgat
cgaggtttgatgttgcagaagttcaacgctccaaactccgatattttcatcttcctcctc
tcaacaagagctggaggactcggactcaatcttcagtctgccgacaccgtcatcatttat
gacagtgattggaatcctcatcaggacattcaagcgcaagacagagcgcataggattggc
caaactaacgaagtccgagtgttacgtctcatgaccgtcagctctgtggaagaaaaaatt
ctcgctgctgccaggtacaagttaaatgttgacgagaaagttattcaagctggtatgttc
gaccagaaatccactgggagtcagcggagagctaagttgttcgaacttgttcaacgaagc
acgactgatgaggatgaagatgaggttcacgatgatgagacactcaaccagatgatcgca
cgaacggaacacgagttcgattccttccaacaaatggacatcgatcgaagaagaacggag
gcgagagatccaaatcgaaaacctcggctcatggaagaggatgagctcccatcttggctc
ctcgcatccgctgatgatgtagagcgactcacacaagaggaagcggatgacaagctcttt
ggaagaggatcaagagtgaggaaagaggtcgattatagcgagtcacttactgataaagaa
tggctgagggccgttgaagatggggtagatgtggatgaactggaagagcaaaagagatac
aagaaacaaagaaagaggaggagaggagaggaggaggataaagctggaccatcgtccgtg
aagaaaaagcgagggcgccccccaatggagaaaccaacacccaatccaccgaagttaaca
aagcagatgaaacgcatcattgatcatgtgatcaagtatactgacagcactggaagaaga
ttaagcgatcccttcctccaacttccggctcgtaaagagcttccggattattacgagatg
atcaaaagaccggtggacatccggaagatccgagagagaatcaaacttcataaatatcga
agttttgatgatctggaacgtgattttcaacagatgtgtctgaacacacaaacatataac
gtagaagggtcactgatcttcgaagactcaattaaactgaacaccgtcttcacttacgct
cgtgaaatgctggagaagagcgacactcttcctcccgatccatcggataatgatgactcg
atcaacatcgctgacgaggatagtcgagcaacgagacactcggtgtcgccacagggcagc
gatgatgaaagggattctgatgatgagcctctcagagtgaagataagactctccaaggag
gagcaggaagctccaaagaagaggaagagtgggagcaggaggaaagtgatctcggatgat
gacgatggggatgatgactcaaattatgaggaatccaatgatgaagattcttaa
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integrated database retrieval system
