Ciona intestinalis (yellow sea squirt): 100180698
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Entry
100180698 CDS
T01056
Name
(RefSeq) LOW QUALITY PROTEIN: non-specific lipid-transfer protein-like
KO
K08764
sterol carrier protein 2 [EC:
2.3.1.176
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin01040
Biosynthesis of unsaturated fatty acids
cin01100
Metabolic pathways
cin01212
Fatty acid metabolism
cin04146
Peroxisome
Module
cin_M00861
beta-Oxidation, peroxisome, VLCFA
cin_M00862
beta-Oxidation, peroxisome, tri/dihydroxycholestanoyl-CoA => choloyl/chenodeoxycholoyl-CoA
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
01040 Biosynthesis of unsaturated fatty acids
100180698
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100180698
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.176 propanoyl-CoA C-acyltransferase
100180698
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SCP2
Thiolase_N
Thiolase_C
Alkyl_sulf_C
ketoacyl-synt
ACP_syn_III
SpoVAD
Motif
Other DBs
NCBI-GeneID:
100180698
NCBI-ProteinID:
XP_026690481
Ensembl:
ENSCING00000024853
LinkDB
All DBs
Position
5:complement(2727867..2736320)
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AA seq
565 aa
AA seq
DB search
MGRKVYVIGVGMTKFEKPGRRENFDYPDMAKEAGLKALADAGISYHQVEQAAVGYCYGDS
TCGQRALYQLGMTGIPIYNVNNACATGSSALFMAKQFIEGGLAECTMALGFEKMERGSLG
SHWTDRTNPMQKHIEVMTEFREIAAAPMTPQLFGNAGLEHMEKFGTKPEHFAKVAWKNHK
HSTNNPYSQFQKEYALDQVLNGRTVYEYLTLLQCCPTSDGSGCAILASADFVRKHGLEHQ
AVEIVAQEMATDLPSTFADKSSMKIVGYDLTKRAVDKIYEKTGLRASDAQVVELHDCFSA
NELITYEALGLCGVGMFNASYLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXAQCTELTWQLRGEAGKRQIKGATLALQHNLGLGGAVVISMYKLGFPEARKEWIK
KQGGHPRIHPQPIKGQLVARATASVSDADGMKTTPVFKEIQKAIEADGASYIEKIKGIIA
FKIKPSNSSKGGVWVINAKTGKGSVEFNSTVKPDCTITMTDDDMYDLMMGKLNPNSAFFS
GKLKISGNMGLAMKIQNIMPAQPKL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaaagtttatgtaattggtgttggaatgacaaagtttgagaagccgggtcga
cgtgagaattttgactaccccgacatggccaaggaggcagggttaaaagctctcgctgat
gctggaatttcttaccaccaggtggagcaagcagcagttggttattgctacggagactcg
acttgtggtcagcgtgctttgtaccaacttggaatgactgggattccaatttataatgtt
aacaacgcatgtgccactggttcatcagccttgttcatggcaaagcaatttattgaagga
gggttggctgaatgcaccatggctcttggcttcgaaaagatggaacgaggctcacttggc
tctcattggacagacagaacgaaccctatgcaaaaacacattgaagttatgactgagttt
cgtgaaatagctgctgcaccaatgaccccacagttgtttggaaatgctggtcttgaacat
atggaaaaatttggcaccaaaccagagcactttgcgaaagtagcgtggaaaaatcacaag
cattcaaccaacaacccatactcacagtttcaaaaggaatatgcattggaccaagttctc
aatggaagaactgtatatgaatatctcacattactgcagtgctgccccacatcggatggt
agtggttgtgcaatccttgccagtgcagactttgtcagaaaacatgggttggaacatcaa
gctgttgagattgtggctcaggagatggccactgatcttccaagcactttcgcagataaa
agcagcatgaagatagttggttacgatctaaccaagcgcgctgtggataaaatatacgag
aaaactggtttacgtgcttcagatgctcaagttgttgaacttcatgattgcttctcagca
aatgagttgatcacttatgaagcgctcggtctttgtggtgtcggtatgtttaatgcttcc
tatttgttgctgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnggcacagtgtacggaactaacatggcagttgcgtggtgaagca
ggcaaacggcaaataaaaggagctacactggcgttacaacataaccttggacttggtgga
gcagttgttatcagcatgtataaacttggattcccagaagcaaggaaagaatggattaaa
aaacagggtggtcacccccgtattcaccctcagccaatcaaaggacagcttgttgcccgg
gcaacagcctcagtatcagatgctgacggaatgaaaacgacaccagtgtttaaggagatc
cagaaagccatagaagcggatggagcttcttacattgaaaagatcaaaggcatcattgct
tttaaaatcaaaccatctaattcaagcaaagggggcgtgtgggtgatcaatgcgaaaact
ggcaaaggatctgtggagtttaattcaacagtgaaacctgattgcacgatcactatgaca
gatgatgacatgtatgatcttatgatggggaaactaaatcctaactctgcattctttagc
gggaaactgaaaattagtggtaacatgggactcgctatgaagatacagaacatcatgcca
gcccaaccaaaactttaa
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