Ciona intestinalis (yellow sea squirt): 100181160
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Entry
100181160 CDS
T01056
Name
(RefSeq) protein argonaute-2 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100181160
03036 Chromosome and associated proteins [BR:
cin03036
]
100181160
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100181160
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100181160
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100181160
microRNA pathway
RISC loading complex
100181160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoMid
PAZ
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
100181160
NCBI-ProteinID:
XP_018672901
Ensembl:
ENSCING00000007310
LinkDB
All DBs
Position
2:1003407..1010622
Genome browser
AA seq
927 aa
AA seq
DB search
MKFTENNLSNPMYQPTGPGQPILPQYGALAGGVPPPQGPAPPGVPPNPMQQAPPAQLIPP
NGRRLYSYPATMDPRFPIATVARDIDFQAPPRPNQGQVGKPIWLKANYFKVSIPNGDIHH
YDIDIKPDKCPRRVNREIINTMVENFRSAIFQDRKPVFDGRKNLYTAQPLPIDKQKLEVE
VTLPGEGRDRTFTVAIKWASRVSLYSLKLALEGKMHGIPFETVQSLDVVMRHLPSLRYTP
VGRSFFSAPEGYTPPLGGGREVWFGFHQSMRPSQWKMMLNIDVSATAFYRAQSCVQFLCD
VLELRIEDLRLIRGLTDSQRVKFTKEIRGLKVEITHCGTMRRKYRVCNVTRRAASTQTFP
LQLESGQTIECSVARYFQEKHSKTLQFPFLPCLQVGQEQKHTYLPIEVCNIVQGQRCIKK
LTDSQTSTMIKATARSAPDREKEIAQLVRKAQFNNDPYVKEFGIQVIDEMTEVRGRVLPP
PKIQYGGDPLMQATPNQGVWDMRGKQFHSGISIDVWAIACFAHQRMCSDQHLRTFIKSLQ
RISEDAGMPIRGTPVFCKYAQGSEHVEPLFRHLCDEFRALQLIVVILPGKTPVYAEVKRV
GDTLLGIATQCVQVKNVVKTSPQTLSNLCLKINVKLGGVNNILVPSLRPKVFNDPVIFFG
ADVTHPPAGDTRKPSIAAVVGSMDAHPSRYSATVRVQQHREEIIRDLAIMVRDLMVEFYK
ATHYKPVRVIMYRDGVSEGQFQQVLSTELRAIREACTMLEVGYQPGITFIVVQKRHHTRL
FCRNHEDRSGKSGNIPAGTTVDIGICHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNNFM
ADELQVLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKDHDSGEGSLQSGHTQ
HDQDAQLQAMSKAVVVHENTVRNMYFA
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccgagaacaatttgagtaatccaatgtatcagccgacgggtccgggccag
ccaatattgccacaatatggcgccctggcagggggggttccaccaccacagggtcctgcc
ccacctggagtcccacccaaccccatgcagcaagcaccacctgcccagctgattccacca
aacggaagacgcttatattcctacccagctacaatggaccctcgcttccccatcgctact
gtggcacgcgatatcgacttccaagctcctcccagaccaaaccaaggtcaagttgggaaa
ccaatctggttaaaagcaaactactttaaagtttccattcctaatggagatattcatcat
tatgatattgatattaaacctgacaagtgtccacgacgagtaaacagagagattattaac
acgatggtagaaaactttcgttcagctatttttcaagatcgtaaacctgtgtttgatgga
cgcaagaacctatacacggcacaacctcttccaattgataaacagaagcttgaagttgaa
gttacattgcctggtgaaggcagagatcgtacatttactgtggcaatcaagtgggcatct
agggtttccctttattctctcaagcttgcacttgaaggaaaaatgcatggcattccattt
gaaacagtacagtctcttgatgtagtgatgcgtcatttgccatcactaagatacacccct
gttggtcgatctttcttttcagcgccagaaggctacacccctccacttggtggtggtaga
gaggtgtggtttggatttcatcaatccatgcgcccatcacaatggaaaatgatgcttaac
atcgatgtgtcagccactgctttctatcgggctcaatcatgtgttcaattcctttgtgac
gttcttgaactaagaattgaagatttgagattgatcagaggtttgacagactcacagcgt
gttaagttcacaaaagaaattcgtggattgaaggttgagataactcactgtggaacaatg
cgtcgtaaatatcgtgtatgtaatgtgacaaggagagctgcttctacacaaacattccca
cttcagttggaatctggtcaaaccattgaatgttctgttgccagatatttccaggaaaaa
cattcaaagactctgcagtttcccttccttccttgtttgcaagttggccaggaacaaaag
cacacctaccttccaattgaagtatgtaatatcgttcaaggtcaaagatgtattaaaaaa
ttaactgacagccaaacctcaacaatgatcaaggctactgcacgttcagcaccagatcgg
gagaaagaaattgcgcagttggttcgcaaagctcagtttaacaacgatccttatgtgaag
gagtttggaatacaggttattgatgaaatgactgaggttcgtggaagagtgcttccacca
cccaagattcaatatggtggagatcctctaatgcaagctactccaaaccaaggtgtgtgg
gatatgaggggaaaacaattccattctggtatcagcatagatgtgtgggcaatcgcttgt
tttgctcatcagagaatgtgctcggaccaacatttacgaacattcatcaagagtttgcaa
cgtatatcggaagatgctggcatgccaattcgtggcacccccgtcttctgtaaatatgca
caaggttctgagcatgttgaaccattgttcaggcacctgtgcgatgagttccgtgccctg
cagttaattgttgttattctacctggcaaaactccagtatacgctgaggtaaagagagtt
ggggatactctgcttggtattgctacccagtgtgtacaggtcaagaatgtggtaaaaaca
tcacctcaaactctttccaacctttgcttgaagatcaatgtgaaacttggtggtgttaat
aacatccttgttccatcactgaggccaaaggtatttaatgatcctgtaatattctttggt
gctgatgttactcacccaccagctggagatacaagaaaaccttccattgctgctgttgtg
ggtagcatggatgcccacccatctcgttatagtgccacagtgagggtgcaacaacatcga
gaagaaataatccgtgatcttgccatcatggttcgtgatctgatggtggaattttacaaa
gcaactcattataaacctgttagagttatcatgtacagagatggagtatctgaagggcag
tttcaacaggtgctgtcaacggagcttcgtgccattcgtgaagcttgcacaatgcttgag
gttggttaccaacctggcattacattcattgtggtacagaagcgacatcatactcgtcta
ttttgtcggaatcacgaggacaggagtggtaaaagtggaaacataccagctggaaccact
gttgatattggtatctgccatccaactgagtttgacttttacctctgcagtcatgctggt
attcagggcacatccagaccctcgcattaccatgtgttatgggatgataataacttcatg
gctgatgagcttcaagttcttacctatcaactttgccatacatacgttcgctgcaccaga
tccgtatctatacctgccccagcatattatgctcacttggtggcgttcagagctcgttat
cacttggtggacaaagaccacgacagtggtgaaggttccttacaaagtggacatacacaa
cacgatcaagatgcacagttgcaagccatgtccaaggcagttgttgtacatgagaatact
gtgaggaacatgtactttgcatga
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