Ciona intestinalis (yellow sea squirt): 100182346
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Entry
100182346 CDS
T01056
Name
(RefSeq) flocculation protein FLO11 isoform X1
Organism
cin
Ciona intestinalis (yellow sea squirt)
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
Motif
Other DBs
NCBI-GeneID:
100182346
NCBI-ProteinID:
XP_002131826
LinkDB
All DBs
Position
8:complement(990080..1008150)
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AA seq
1535 aa
AA seq
DB search
MDRIENLLDTGGRYLSPADRQFVSTLLSELEQFQYQAPKDRALMFHPLGGFQRYLIHKVT
EVFPKLTSFSIGDDSNRRTVVCFKSKKKDQQQGLQANGTSKTLPNPKNEYVNAPVRGREE
EGRQSAPRSRDSSRSRKKNEPYDANTSKQPRQPKQLDQAYLPKPLRTKKATNKRDQMKRS
RSLQSSPVRMDEEVYHTDDDGRRGRRSKGSESGKRAPRSASLKPSSRRRERDVSPEPSED
EFRRQKQHPPLRHNVSDVSIHKRSQGLRMEGKVVNGDIADPHSYGDSESDIGRVDHVAVN
KEKERHKKKAPPVESLKRGQPRSRRHSQESSARSVSEDSDAHHYHRDPRRTTPGKAKRRP
EYSDVDSIEVESRISGIHDDMDEDSSNDYYEDEDSASMASDERPPSYERVKHSSSIKKAE
RNLNRIKRVDSQRSKPTSDEDVQIRDSSSSSSGRTVPRGSTHKSPPASTSSHHSKEGKMQ
RSSTMPRSTKEPAKKQRSSSKGRSQTLKGPPVSTGRSKSQSTKKHPAPPPPQKEEEKPKR
SSSSKQRKKPTSLDEPKKHSSVVTSTDDLLDASNSTLYHPLPDQEQPSTSKKKSTKEKQK
KHSQQSSPATPPSDPNAISPVTCDGTAQTEVSGTLSRRKDNRLRESTDTTPQDSPSHQPS
NPDYSSPNRFTSAPPPQGNSFQQQNLLNAFHHLMQQQVQQNSNLPPLPPQLAHQLYLSWL
GAYYAGATGAPPPAPPPFIIPQTNNSNSQHLDVPPVLSPANLQTHQLHQTHDRPPNAEEA
ARYYEQFAHPHNQDDGYNDYNDVPPPTDQYHFNDGVPAEDYARQERGRPTTKCDNGHCNT
SIVLTDADMTDTSSVASSVAKGEIAVANNPKGGVMIYVRSQPNSRSNSTAGTHESVESLN
TSDNVQSLGSSEHGSQTNLSERKKSPRGSSKGKKIPKQSSPAKNGLSSRKATEGERVDPP
RTNLAFSTNDGIPPPNHNNNHSLAPSTEKVSSLHATDAFLGPIPSPNTFSNALSAPNRRP
KEPVKNSTPSGRKSVKSSTRKPRNDPDTPSTSFNTSAMLQDANPDASHEEMILSLRRAPL
ATIEDDVDGFLSGSHASSCSSLNSAPPVPKETKNTEAPPKETTQPPIPTENIPKPQDIEP
ATNSVDVEVHENDEATGAEENSESESDAASTKSNVGSIDRSAGDISIYSLDASDGSDKED
EDDKQESDKERSGESSDSEEATWPAPPVPVNGDGVDKFKSPVSGDEQPSPPQEPATVTQT
IDIVTSPTDNADNEEIEQHQSAGSVTSSSSEPFAAPQHPEVPLIDVSDSDASSTATEGEK
AAENGDLGNGEGERSNSSSDLSTSDENHKMSDGSYDGDQSRTEESILADKEQPATNGTNQ
VVEVDGEMVVVQEPQFDYYKWKPDQDVWKSPEYKKFVEIFNFPASMSDIEVTQHLSKYRG
LRLARVDATHALCTLPSDVIAEELADQHFTAFETRPLCDASKQTKAKAKAKLENEKFEEV
RAQRPKSSNAVAKRMIAGALGSSHRSSANKQSTKK
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtatagaaaatctcttagacaccggtggccgttacctgagccctgctgatcgt
cagtttgtatctacattgcttagcgagcttgaacagttccaatatcaagcaccgaaagat
cgggcgttgatgttccatcccctgggaggtttccagcggtatctcattcacaaagtaact
gaggtctttcccaagttgacgagtttcagcattggcgatgacagtaacaggagaactgta
gtttgcttcaaaagcaaaaagaaagaccagcagcaaggattacaagccaacggaacatct
aaaacacttcccaaccctaaaaacgaatatgttaacgcacctgtgcgtggaagagaggag
gaaggaagacaatctgctccgaggagccgagattcctcaaggagtcgaaaaaagaacgag
ccgtacgatgctaacacatctaaacaaccgcgccaaccaaagcagttggatcaggcatat
ctgccgaaaccgctacggacaaaaaaagcgacgaacaaacgcgaccaaatgaagagatct
cgttctctgcagtcttcccctgtgaggatggatgaagaggtttatcacacggatgatgac
gggaggagaggcaggaggagcaaaggaagtgagagtgggaagagagctccgaggagcgct
agtctgaaaccttccagtcgaagacgggagcgtgacgtttcgcctgaaccgtccgaggat
gaattccggcgccaaaaacaacatcccccattacgtcataacgtctctgacgtaagcata
cacaagcggtcgcaaggactacgcatggaaggaaaggtcgtaaacggggacatagccgat
ccgcactcgtacggtgacagcgagagcgacatcggacgcgttgaccatgtcgctgtgaac
aaggaaaaagagagacacaagaaaaaggcaccgcccgtcgagtcactgaagcgtggccag
ccgagaagtcgacgtcacagccaagaaagcagcgcgaggtcggtgtcggaggacagcgat
gcacaccattaccaccgcgatcctcgacgtaccactcctgggaaggcgaagagacgacca
gaatacagtgatgtggactctattgaagtggagtctaggattagtgggatacatgatgac
atggatgaagactcctctaatgattactatgaagacgaagactccgcatcaatggcttcc
gatgagcgtcctccgtcatacgagcgtgtcaagcactccagctccattaaaaaagcggaa
cggaaccttaaccgtatcaagagggtcgactcccaacgttcgaaaccaacttccgacgaa
gatgttcagattagggacagcagtagtagcagcagcggtagaactgtaccgcgtggttcg
acgcataaatctccacccgcttcaacgtcgtcacatcattcaaaggaaggtaaaatgcaa
cgttcatctactatgccacgttcaacgaaagaacctgctaagaaacagcgttcctcttct
aaaggcagatcccagaccttaaaaggtcctccagtctctaccggtcggtcaaagagtcag
agcactaaaaagcatcctgctccccctcctccacagaaagaagaagaaaaaccgaaacgc
agctcgtcttcaaaacaaagaaagaagcctaccagcttagatgaaccaaagaagcatagt
tctgttgtaacatccacggacgacttgctggatgcttccaactccactctctatcatcct
cttcctgatcaggagcaaccatcaacgagtaagaagaaatccacgaaagaaaagcaaaag
aaacattcccaacaatcctccccagccaccccaccgtctgaccccaatgcaatctcacca
gtgacttgtgatggaactgctcagaccgaagtcagcggtactttgtcccgtagaaaagac
aacaggctacgagagtcgacggacaccaccccacaagactctccttcacaccagccttcg
aatccggattattccagtcccaaccggtttacttcagctcccccaccacagggcaacagc
ttccaacagcagaatctactcaacgcattccatcaccttatgcagcagcaagtacagcag
aattcaaacctgccaccactgccgccacagctagctcatcagttgtacttatcctggctt
ggagcatattacgctggagcaacaggagccccacctcctgccccgcccccttttatcatc
ccacaaacgaataacagcaacagccaacacctggacgttcctcccgtcctcagcccagca
aacctgcagacgcatcaactccaccaaacccacgatcgtccaccgaacgctgaagaagca
gcccgctattacgagcaattcgcgcacccccataaccaagatgacggctacaacgactac
aacgacgtgcccccacctaccgaccaataccattttaatgatggtgtcccagcagaagac
tacgcgcggcaggagcgcgggcggcccacgaccaaatgcgacaacggccactgcaacacg
tctattgtcctcaccgacgccgacatgactgacacatcatcagtagcaagttcggtggcg
aaaggtgaaatagcagtggcgaacaaccctaaaggaggagtgatgatctacgtacgcagc
cagcccaacagtcggtccaacagcaccgccggcacacacgagagcgtcgagagtcttaac
accagcgacaacgttcagtcgcttggtagcagcgagcacgggagtcagaccaacctctcc
gagcgaaagaagtcgccccgcggcagcagcaagggaaagaagatcccgaaacaaagttcg
ccggcaaaaaacggactgagctctaggaaggcgaccgaaggtgagagagtggatccaccg
cgcactaacctcgcgttttccactaatgacggcataccaccgcctaatcataacaataat
cactcgctcgcaccttctactgagaaggttagctcgttgcatgcaacagacgcctttctg
gggccaattccgtcaccaaacacattttctaacgctctttcagccccgaaccgccggcca
aaagagccggtaaagaacagtacaccgtcgggacgaaaatcggtcaaatcttcgacaaga
aaacctcgtaacgaccccgatacacccagcacaagttttaacacgagtgccatgctacaa
gatgccaatcctgacgcttcacacgaagaaatgattctttcgctgcgaagagcgcctctc
gccaccatagaagatgatgttgacggtttcctttccgggtcacatgcttctagttgttct
tcccttaactcagcgcctccggtcccaaaggaaacaaagaatacggaggctccaccaaaa
gagaccacccagcctcccataccaacagagaacatacctaaaccacaagatatagaacca
gccaccaactctgttgatgttgaggtgcatgaaaacgatgaagcaacaggggcagaggaa
aactccgaaagcgaaagcgacgctgcgtctacgaaaagcaacgttgggtcaatcgaccgc
tcagctggtgacatatctatttactccttggacgcttccgatggctctgacaaagaggac
gaagacgataagcaggaaagcgacaaagaacgctccggggaaagctcagattctgaagaa
gcgacatggcccgcacctcctgttcctgtaaacggcgacggcgtagacaagttcaagtcc
cccgtatcaggcgacgagcagccatctccgccgcaagagcctgcgaccgtcactcaaacg
atcgatatagtaacgtctccgactgataatgctgataacgaagagatagagcagcaccag
tctgctggctccgtgacatcgagcagctctgagccgtttgccgctccccagcatcccgaa
gtcccgctgattgacgtttccgactccgacgcgagctcgaccgctaccgaaggcgaaaaa
gccgcagaaaatggcgacttgggaaacggcgaaggggagcgaagcaactcgtcctcggat
ttatccacgtccgacgaaaaccacaaaatgagtgacggtagctatgatggggatcagagc
aggacagaagaatcgatcctcgctgataaagagcaaccagcgaccaacggaacaaaccaa
gtagttgaggtggacggtgaaatggtcgtggtccaggagccacaattcgactactataag
tggaaaccagaccaggacgtgtggaagagcccagagtacaagaaattcgttgagattttc
aattttcccgcctctatgagcgatatagaagtcacgcagcacttgagcaaatacagggga
ctcagattagctcgtgttgatgccacgcatgctctctgtacattaccatcggatgtgatc
gccgaggaattagctgatcagcacttcacagcgtttgaaactcgtcccttatgtgatgca
agcaagcaaacaaaggcaaaagcaaaggccaaactagaaaacgaaaagttcgaagaagta
agagcccaaagaccaaaatcaagtaatgctgttgcgaagcgcatgatagctggtgctctt
ggttcaagtcaccgatcttccgcgaacaaacagtctacaaaaaaatag
DBGET
integrated database retrieval system
