Ciona intestinalis (yellow sea squirt): 100183322
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Entry
100183322 CDS
T01056
Name
(RefSeq) B-cell CLL/lymphoma 9 protein isoform X1
KO
K22649
B-cell CLL/lymphoma 9 protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
100183322
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Gene cluster
GFIT
Motif
Pfam:
BCL9
Motif
Other DBs
NCBI-GeneID:
100183322
NCBI-ProteinID:
XP_018669171
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All DBs
Position
10:complement(4190287..4211584)
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AA seq
1880 aa
AA seq
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MEVNHIKSSTSPIMGISGNMQTTAKIKGNISSSPVPINYNNCSPHGAIGNNGCRSSSPYT
ETRGSKPEDSNKTQASGVNSTAVTPAAAQGTPVSATLTASMRPSIGGVTPTKRQNLKITI
HPNQSGDSRNPSGVAGSNETKGVAVQARREGPPTNHLTGEKIQRAGKISRSNRANSLGGV
NCSARRHTPVETGQLDSHPAKEGSNRVPSLTKVNDKLSQRQSPRTPVDYSASDRDSPFNS
YSSPSSNENPHMVTSARAKAKGNFTQDLPTTTTVSHPHRMSRTSSSNSVSDLSMCSEVTD
ENGHAESSTTTTVSSLSSEISSSGVQYMTRTETSEGTTMNNELRIENELIDSPYDDDTAI
VNAINDFTEASGDSLKTRDGIIDSKSREERLQNDKVGLSLDDVDNFRFPDATTVAGDIGP
DALNLSAEDIQQTLNSVSAETNLNLGISQGDSAISSTFGDTSMLNNGIPYGTSNVSGDFQ
PTDISAVLSPSLTTVSIPTSSTASIVTTVVSSLNDVLSTSQTASSTMVSSSVTSSSFSSE
GYHSNSSSIFQHQSTNSSTSVSFSPSGPNTAVGRSHLQEILGETDTNRLKNMARPIDSTQ
YHATTSTSFSSNIIQNNNTNPYVSRSSSLSDVPHPELGPGTPLPNLPPTHHHRFTPPGNS
NFQRAMHQRMPNPPHHGFPPGAGPHGPMPHGFELMNQYHEHGGPRPGVHFEPGMHPGGGY
NVPSSPQSMPGSQPWQRQGSMGGMMSPHTPMSAGPMGEGNKSPRGPGNFNSFPPKSGNPI
CGLQSTVNSIPDTFASGPLGSMTKNNNNNMGPPHGGPGIPTPMGMGDFGGTPPPMSCRNS
MLPPPSPSILDKRSMSAEGSIVGNPPSRSKANKRERGQSADSKDGDKRGKESGPKPKRRK
SKSKDESKKNQPDSKARSSSVSDVQNSNPYLYIFNSEMANNAANMVTQQKVPSIISYHHS
FQGNCRLLPSKNTPSGFNLRSPHPTTTTTANGGVIKTEPKSSFRSPLPMSGSPMVSNQRP
PKSDSAGLLSPLNNRNQKAEETKDTQPTAAVKQESEAAQEVTNQQSPNSQVKNEGGDKNL
SDEQIRHRMKSLNRIQNLKSMLLPDAERRDSAGEQAHVPSSAEGPSWATQAPGAVRGNYA
MTRHLEKVRKMVKATPMNAMGPHVSTKENSEWFRLVQAYNEEKRRTRMIHSHPDNMPGDL
PHDPPPPYNPGGPQQRWMAPGHPIREPGMPPNHEMVNPRFPPHMGLRTPVRIPHDRLPPG
MHQRMRYMVPSGGPGGRMPIYTNQPSGMVGPPNPSSQRLPGPHNLSNEAYPFSAQLKKQA
ARNCSGGMRGPQPGFDIPNPGDPTIGGRLSSPEWSQYPNAGIPHGPRLSHMGENVSPPHG
HMEPGMMMTGPGPLPSQPMEPGIDSRLSHIDSPMSMRMNNPSMCLPYNFTGKGPGPLPNY
PETSIPNIGPNNLGPAFPSPDMQPPGGHMSIAQDISNPSSRMMDTMARRGEPRPPDLIIN
PIRSPLPYQQAGRHPAPSPSMVPNPAMGGGPQFIQGDMTPGMLPQASPHHSLPRSPTMMN
SPGMMKSPMTGGIPNQGPYMGMGPQVPMQQMTMERGMMQGGPPSSVHGVPPQDWNSIPPS
SLPPQHPPSSITIASSNHGVGSSALTVMINHMNTIQMPTHCPLYQDAVKDTSSPPPLSHM
NGGPMMSQEPPPLSHNPNSMEPTMPLNHGGNGMMVRGMVHQGMPGGPPSYDPGMQGPRTS
GPRMLGPMDAFPGEYTRSPSQPGMPMSPSMQGPPQGMMQSGMMEMHGPPSGYMMHGMMGG
GGQPPNHHGNGQGLPPMSGKQFPPFDLTGIIPTEKPSQTLNYFPGGGNSAQENQMEMPNN
PQMLLRIHLLIHIHISGTQT
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaatcatatcaagtcttccacctctcccatcatgggtatctccgggaacatg
caaacgaccgcaaaaatcaaagggaatataagttcctctcctgtccctatcaactacaac
aactgcagcccccacggagctatcggcaacaacggatgcaggagttcctcgccctacaca
gaaacaagggggagcaagccagaggactccaacaagacccaagcaagtggagtgaacagc
actgcagttactcctgctgctgcacaaggtacacctgtttctgccaccttgacagcgagc
atgaggccttctattggaggtgtgactccgacgaaacgacaaaacttgaagatcacgatt
cacccgaatcaaagtggggattcgaggaaccccagtggagtagctggttcaaatgaaacc
aaaggagtagctgtgcaagcccgtcgtgaaggaccacctaccaaccatcttactggtgaa
aaaatacagcgcgccggaaaaatcagtcgcagtaaccgagccaactctctgggtggtgtt
aactgctctgcaaggaggcatacaccggtggagactggacagttggacagccaccctgct
aaagaaggcagtaacagagtgccaagccttactaaggtgaatgataaactgtcgcaacga
cagagcccaagaactcctgttgattacagcgcaagtgacagagactcaccgtttaattca
tactcctccccatcctcaaatgagaatcctcatatggtaacctccgcgagagcaaaagcg
aagggaaatttcacccaagaccttcccaccacaacgactgtatcccaccctcacagaatg
agcagaacgtcgtcaagtaacagtgtttcggacctcagtatgtgcagcgaagtgacggac
gaaaacggtcacgctgagtcctccaccaccaccactgtatcttccctatcaagtgaaatc
agctccagtggtgtacagtatatgaccagaactgaaaccagtgaaggcaccactatgaac
aacgagctacgcattgaaaacgagttgatagactcgccgtacgacgatgacactgcgatt
gttaacgcaattaacgatttcaccgaagccagtggtgactcgctaaaaactagggacgga
ataatcgattccaaatctcgggaagaaagattgcaaaacgataaagttggactcagttta
gatgacgtggataacttccgctttcctgatgcaaccacagtagccggcgatatcggtcca
gacgccctgaacctttcagcggaagacatccagcagactctaaactcagtttcagcggaa
acgaacttaaaccttggcatctcgcaaggtgattctgccatctcgtccacgtttggggat
acctccatgttgaataatggaataccttacgggacatcaaacgttagcggtgacttccaa
cccacggacattagtgctgttctatcaccctcgctaaccactgtatcgatacctacctca
tctactgcaagtatcgtcacaacagtggtctcttcattaaacgatgtcctcagcacctct
caaactgcttcttccacaatggtttcatcaagtgttacatcatcatcattttcaagtgag
ggttaccatagcaacagcagctcaatattccaacaccaatccacaaattcatccacctcc
gtatcgttctcaccctctggtcccaacactgcagtaggaaggtcacatcttcaagagata
cttggtgaaaccgacacaaacaggttgaagaacatggcacgtccaattgattcaacccag
tatcacgccactacatctacctcattcagttccaacatcatccaaaataacaacaccaat
ccctacgtctctcgttcgtcatcgttatccgatgtcccacacccagagttggggccagga
accccgttacccaatttaccccctacccaccatcaccgtttcacccctcctggaaactca
aactttcagcgagccatgcaccaacggatgccgaaccccccacaccacggcttcccccca
ggtgctgggccacatggccccatgccgcacggcttcgagctcatgaaccagtaccatgaa
cacgggggtccacggcctggggttcattttgagcccggcatgcaccccggtggaggttac
aatgtcccttcgtcaccccaaagcatgcctggttctcagccatggcagcggcaagggtca
atgggtggtatgatgtcgccccacactcctatgtcagcagggcccatgggtgaaggtaac
aaaagccccaggggaccaggtaacttcaacagttttcccccaaaatccggcaaccccatt
tgtggcttacaaagcacggtcaattctataccggacacctttgcgagtggaccccttggt
tctatgaccaaaaacaacaacaataacatgggtccgccccatgggggtccaggtattcct
actccgatgggcatgggtgactttgggggcacacccccacccatgagttgccgaaacagc
atgctcccgcccccttctccatcaatcctggacaaaagatcaatgagtgcagaaggtagc
atcgtgggtaacccaccatccagatcaaaagctaacaaacgagaaaggggtcagtcagct
gattccaaggacggagataaaagaggaaaagagtctgggccaaaaccgaaaaggcgcaaa
agtaaatcgaaagatgaaagtaaaaagaaccaacctgattctaaagcaaggtcaagtagt
gtcagtgatgttcagaactccaatccttatctttacattttcaactctgaaatggcgaat
aatgcagccaacatggtcacacaacagaaggtgccttccataatatcctaccatcattcc
tttcaaggaaactgtcgtctcctgccatcaaaaaacaccccatctgggtttaacctgcgt
tccccccaccctacaacaacaacaacagcaaacggcggggttataaaaacggaacctaaa
agctccttccgtagccccctacccatgtcaggctccccgatggtctcaaaccagcggcct
ccaaaatcagactccgcaggccttcttagtccattaaataaccgaaaccaaaaagctgaa
gaaacaaaggatacccagccaacagcagctgtgaaacaagagagcgaggctgcacaggaa
gttactaaccaacagtcccctaattcccaggttaaaaatgagggtggtgacaagaatcta
tctgatgagcaaatacgccatcgcatgaaatcgctcaacagaatacagaacctcaagagc
atgttgcttcctgatgcagaacggagggattcagctggggaacaagctcatgtaccatcg
tcagctgagggaccaagttgggcgacgcaagctcccggtgctgttcgaggcaactatgcg
atgacacgccacttggaaaaggtgcggaaaatggttaaggctaccccaatgaatgccatg
ggccctcacgtctcaaccaaagagaacagcgagtggtttaggctagttcaagcatacaat
gaggaaaaaagacgaacccgaatgatccacagtcaccctgacaacatgccaggggactta
ccccatgacccaccacccccttataaccccgggggtccccaacaacgatggatggctccg
ggacacccgatccgtgaacctggaatgccccctaaccatgagatggtaaacccccgtttc
cccccacacatgggactaaggacacccgttcgaataccccacgaccgattaccgccgggc
atgcatcagcgcatgaggtacatggtgcctagcggtgggccaggaggccgaatgcccata
tataccaaccaaccatctggcatggtggggcctcctaacccttcatcacaacggttacct
ggcccccacaacctaagcaatgaagcttaccccttctcagctcaactaaaaaaacaagca
gctcggaactgttcaggtggcatgcgaggtccccaacccggctttgacatccctaacccc
ggtgacccaactatagggggtcgtttaagctccccagaatggtcgcaataccccaacgca
ggaataccccacggtccacggttatcgcacatgggcgaaaacgtgtccccaccccacgga
cacatggagcccggtatgatgatgacaggcccaggtccgttaccatctcaacccatggag
cccgggatcgattcccggctctcccacattgactcacccatgagtatgaggatgaataac
ccctcaatgtgtcttccttacaatttcaccggaaaaggtccggggccgttacccaactac
cccgaaacgtcaatcccgaacattggccccaataacctgggtccggccttcccctccccc
gacatgcaaccccctgggggccacatgagcatagcacaggatatatccaaccccagtagt
aggatgatggacacgatggcaagaaggggtgaacctcgtccccctgacttgatcattaac
ccaataagatcacccctcccataccagcaagcaggtcgtcatcccgccccctcccccagc
atggtccccaaccctgccatgggtggtggcccccagtttatacagggtgacatgaccccg
ggtatgctgccccaggcttcaccccaccactccttacctcgctcacccacaatgatgaat
tcacccggcatgatgaagtcacccatgacggggggaatacccaaccaaggtccatatatg
ggcatggggccacaggtacccatgcaacagatgaccatggagaggggtatgatgcagggt
ggtccaccatctagcgtccatggggtaccaccacaagattggaactcgattcctccttca
tcattacctccccagcacccaccttcaagcattaccatagcaagctcgaatcacggcgtt
ggatcatctgcactcacggtgatgattaatcatatgaatacaatccaaatgcccacacat
tgccctctctaccaggacgcggtgaaagatacttcaagcccccctcctttgtctcacatg
aatggaggtcctatgatgagccaagagcccccacctctgtcccacaaccccaacagcatg
gagcctaccatgccgctcaaccatggtggtaatggtatgatggtgcgtggtatggtacac
caaggcatgcctggtggtccgccgagctacgaccccggaatgcagggtcctagaacctca
gggccccgaatgttggggccaatggatgcatttccgggcgaatacactcgctcaccctcc
caacctgggatgccgatgtctccctccatgcaaggtcctcctcaagggatgatgcagtcc
gggatgatggagatgcatggtcctccatcagggtacatgatgcatggtatgatggggggt
gggggccagcccccaaatcaccatggcaacggccagggccttccgccaatgtcaggaaaa
cagtttccaccgttcgaccttacaggaatcattccgacagaaaaaccgtcgcaaactctg
aactactttcctggtggtggtaactctgcgcaggaaaaccaaatggaaatgcccaacaat
ccacaaatgttactgagaattcacttacttattcatattcatatttcaggtacccaaaca
tga
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