Ciona intestinalis (yellow sea squirt): 100183994
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Entry
100183994 CDS
T01056
Name
(RefSeq) procollagen galactosyltransferase 1 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00310
Lysine degradation
cin00514
Other types of O-glycan biosynthesis
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100183994
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100183994
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100183994
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
100183994
Glycosyltransferases [BR:
cin01003
]
O-Glycan biosynthesis
O-linked Gal type
100183994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
100183994
NCBI-ProteinID:
XP_002129882
Ensembl:
ENSCING00000022628
UniProt:
H2XPJ9
LinkDB
All DBs
Position
13:209319..216558
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AA seq
594 aa
AA seq
DB search
MVLLRYKIIVLFLSYNVILAKEYSSFKETEEKLKNEYFVPVENWKYSEGAGWREPTVFVP
IFVRNKAHALPYFLKCLYDLNYPKKRLSLWIVTDHNSDNSSQILEKWTNTVKHEYHDLVF
EKPDTEWFYKEQKGNLHWPEERHIKMLQLRQQALEKARKMWSDFILYLDADNMLINPHTL
QHLISRDLTIVAPMLTTIASYANFWADQDENGYYKRADNYFEIRNRETVGVFEVPMVHST
FLVNLVARKSRKLRFWPLHEDYYLLVDDIIVFSIHAKLADIPLYIDNTHIYGCMPIPLKH
DQSLREEVETFTHFIMEIMTEPPVGIGIEIQPVDYLKPVFHNTSLGFDKIFMINLERRED
RYYRMSKALELQGIEFTHFKAVDSKTLNTTYLKHMGIDMLPGYVDPYRERTLTRGEIGCF
LSHYFIWQEVVKNKLDQVIVFEDDLRFEISFNRRLKNVMQEIEDAKLEWDLIYIGRKRMQ
IKEPEKSVPDCPLLVEADYSYWTLAYILSNSGAQKLLAGKPLHRMVPVDEYLPIMFNKHP
IEKYMTPFEKRDLKAFSVNPLLIYPTHYTGQINYFSDTETSSIWEDVHASKEEL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtcttattacggtacaaaattatcgttctctttttaagctacaatgtaatacttgcc
aaagagtacagctcttttaaagagacagaagaaaagttaaaaaatgagtattttgtacct
gtcgaaaattggaagtattctgaaggcgctggctggcgtgaaccgactgtttttgtcccg
atttttgtccgaaataaggcacacgcactgccctattttttaaagtgtctgtatgacctt
aattatcctaaaaagagactctcactttggatagtaactgaccacaacagtgacaactct
tcacaaattctggaaaaatggacaaacacggtaaaacacgagtatcatgacttggttttt
gaaaaaccagatacggaatggttctataaagaacaaaaaggcaatttacactggcctgaa
gaaagacatatcaaaatgctgcaactaagacagcaggcattagaaaaagccagaaaaatg
tggtctgattttatactgtacttagacgctgataatatgttaataaatccacatacgtta
caacatctaatatcaagggatttgactattgtagctccaatgctgaccacgatagcaagt
tacgctaatttctgggcagaccaagatgaaaatggctactataaaagagctgacaactac
tttgaaattcgtaatcgagaaactgtaggtgttttcgaggtgccgatggtacattctaca
ttcttagtcaatttagtggcaagaaaatcacgtaaattgcggttttggccgttacacgaa
gactactatcttttggtagatgatataatagtgttttcgattcatgctaaattagcagat
ataccattatatatcgacaacacacatatatatgggtgtatgccaataccattaaaacac
gatcaatcgctaagagaagaagttgaaacattcacccattttataatggaaattatgact
gagccacctgttggaataggaattgaaattcaaccagtggattatttaaaaccagtgttt
cacaatacaagtttgggatttgataagatttttatgatcaatttggaaagaagggaagac
agatactacagaatgtctaaagctcttgaattgcaaggaattgagtttacacactttaaa
gctgtggacagcaagactttaaacacaacgtatttgaaacacatgggaatcgacatgttg
cctggttatgtagatccttatagagaacgaactttaactcgtggggaaattggctgtttt
ctgtctcactactttatttggcaagaggtggttaaaaataaattggaccaagttattgtt
tttgaggatgatttaagatttgagatttcttttaatagaagattgaaaaatgtaatgcaa
gaaattgaagatgctaaattggaatgggatttaatatatatcggccgaaaacgaatgcag
ataaaagaaccagaaaaatctgttccagactgcccccttttagttgaggcagactattca
tactggacacttgcatacattttgtccaattctggtgctcaaaaactacttgctggcaag
cccctacatagaatggtgccagtcgatgaatatctgcccattatgttcaacaaacaccca
atagaaaaatatatgacgccttttgagaaaagagatctaaaagcattttcagtgaatcct
ttattgatatacccaactcattacacaggtcaaattaactactttagtgacacagaaacg
tcttcaatttgggaagatgtccatgctagcaaagaagaattataa
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