KEGG   Ciona intestinalis (yellow sea squirt): 100184298
Entry
100184298         CDS       T01056                                 
Name
(RefSeq) protein transport protein Sec24C
  KO
K14007  protein transport protein SEC24
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100184298
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100184298
Membrane trafficking [BR:cin04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    100184298
SSDB
Motif
Pfam: Sec23_trunk Sec23_helical Sec23_BS zf-Sec23_Sec24 Gelsolin
Other DBs
NCBI-GeneID: 100184298
NCBI-ProteinID: XP_002125572
Ensembl: ENSCING00000003689
LinkDB
Position
7:175103..184914
AA seq 1014 aa
MQPPNYQYPPQGPMSMDPVYNQSNYPPHNSAVGGNVTYTHGGALQTSKHTPPATSGSIPS
QQPPVTSVNGYYNGHQYQSNNMYHSGPQMNPPPTSYNQPITSPPPLPSNTNSGMNNPPAS
GYQQNYQRPPTSEYPQQPGYPVSGAGEPPRPNEHSYSKPNQPPYQPIHQQMSNMSINNQN
QTFNQAPGSYMPPPSTPGYIPPPQTINPTQSYPQPGPPGAAGVARPPNYPNQPVTAPPKR
LDPDAMPSPIQVIQDDKINRGGEGFRTEGRGLVPPLVTTQFTVEDMGSVSPRYVRCTAYN
LPATADMAKNCQVPMSLCVKPLSALPEGESPPFIVDPGPDGPIRCKRCKAYMCPQFTFTD
GGRRFQCVLCNAITDTPHSYFDHLDHMNHRVDKYRRPELCRGSYEFIATKDYCRNDKFPL
SPAFIFAIDVSYNAMKSGYVDLLCRQLHTLLDTLPKEAHQEKSSIRVGFITYNNVLHFYN
LKSSLAQPQMMVVSDVNDVFVPLQDGFLVDLDQSRHVIDSLLDQIPDMFRDTRETELVFA
PVIQAVVQALKSAECAGKLFMFHTSLPIGEAPGKLKNRDDRKLIATDKEKVLFNPASNFY
EKLAKDCVAQACCVDLFLFPNQYVDVATLSQVPQYTGGQVYKYNFFRSDIDGSRFIKDFA
HDLQRDIVFDAIMRVRTSTGIRAVQFYGSLYMGNTTDVELAAIDCDKAIQVELKHDDKIA
EEYGAYVQIALLYTSVSGQRRLRLHNLNLSVCTQLADLYRSCETDVLMNYLAKKAVVSAL
QSSSAKLREELINQISVTLATYRKHVASPSSPGQLILPECMKLLPVYLNCLLKNDAIHSS
HDVTTDDRAYLRHLIISMDVSDTQTFLYPRLIPVFGETVSIEGLPPAIRCSEERMKENEA
YLLENAVSLFLWIGQSVDPAWIQNVFGVQSAAQIDIDLVNLVVYDNEDSRKLRDLVAKLQ
ASRNRQMKFTIVRQRDKLEPWFKHLLAEDRGAGGATSYVDFLCHMHKEIRALLN
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgcagcctccaaattatcagtatccaccccagggcccaatgtccatggatcctgtgtac
aatcaatccaactatccaccacataattctgctgttggtggaaatgttacttatactcat
ggtggtgctttacaaacaagtaaacataccccaccagctacaagtggaagcataccaagc
caacaaccacccgtaacatcggtaaatggatattataatggccatcaatatcaaagcaac
aatatgtatcattctggaccacaaatgaatccaccccctacttcatacaaccaaccaata
acgtcaccaccaccattaccaagtaatacaaactctggaatgaacaatcccccagcaagt
gggtatcaacaaaactatcaacgtccaccaacttcagaatatccccaacaacctggttat
cctgtatctggtgctggagaaccccctcggccaaacgaacattcatattccaaaccaaac
caacccccgtaccaacctattcatcaacaaatgtcaaacatgagtattaacaaccaaaac
caaacctttaaccaggcacctggatcttacatgccacccccaagcactcctggttacata
cctccaccacaaacaattaacccaacacaatcttatccacaacctggaccaccaggagca
gcaggggttgcaaggccacctaattaccccaaccaaccagtgactgcaccaccaaaaaga
cttgaccctgatgccatgccaagccccatacaagttatacaagatgataaaataaaccgt
ggaggggaagggttccgcacagaaggcagaggcttggtacctccattggtgaccactcag
ttcactgtagaagatatggggagtgtcagcccaaggtatgttcggtgtacagcatacaat
ctaccagcaactgccgatatggccaagaattgtcaagtaccaatgagtttatgtgtgaag
ccattatcagctttacctgagggtgaatctccaccatttatagttgacccgggccctgat
ggtccaattcgatgcaaacgatgcaaggcatacatgtgcccacagtttacattcactgat
ggtggaagaaggtttcagtgtgtcctgtgtaatgcaatcacagataccccacatagttat
tttgatcacctcgaccacatgaaccatcgtgtggataaatatagaaggcccgagttgtgc
cgaggttcgtatgaattcatcgcaacaaaagattattgtcggaatgataagtttccactt
tccccggcctttatatttgccattgatgtttcatacaacgcaatgaagtctggttatgtt
gaccttctgtgccgacaactccatacattgcttgatactctacctaaagaagcacatcaa
gagaaatcctcaattagagttggtttcatcacttataacaatgtcttgcatttctataat
ttgaagagttccctggcacaaccacagatgatggtagtatcagatgttaatgatgtgttc
gttccattacaagatggattccttgttgatcttgatcaatctaggcatgtgatagacagt
ttgttggatcaaatacctgacatgtttcgtgacactcgggaaactgagcttgtgtttgct
ccggtcattcaagctgttgtgcaagcactcaagtcggcagaatgtgctgggaagttgttc
atgttccataccagtctcccaataggggaagcacctggaaaactcaaaaatcgtgatgat
cggaaattaattgcaacagacaaagaaaaggttttattcaaccctgcaagcaacttctat
gagaaacttgcaaaggattgtgttgctcaagcttgctgtgtggatttgttcttatttcct
aaccaatatgtggatgtagcaaccttatcgcaagtcccacaatatacagggggacaggtg
tacaaatacaacttcttccgatctgacatcgatggttctcgtttcatcaaagattttgct
catgaccttcaacgtgacattgtgttcgatgcaatcatgcgtgtgagaacaagcaccggt
atccgcgctgtccagttctatggttccttatacatgggtaacaccacagatgttgaattg
gccgccatagattgcgataaagccatccaagttgagttgaaacacgatgataaaatagct
gaggaatatggggcgtacgtgcagattgctctgttgtacacatcagtgagtggacagcgt
cgacttcgtttacataatctaaacttgagtgtatgtacccagcttgctgatttatacaga
tcttgtgaaacggatgttttgatgaattatcttgctaagaaagcggttgtatctgctcta
caatcttcatctgcaaaactacgggaagagttgattaaccagatatcggtgacacttgcc
acgtatcgtaaacatgtggcttcaccctcgtcaccgggacaacttatcctaccagagtgc
atgaagttgttgcctgtgtacttgaactgtttattgaagaacgatgccatccattcgtca
catgacgtcaccactgatgatcgagcttatttgcgccaccttattatttccatggatgtt
tcggacacacaaacatttttgtatccacgtcttataccagtgttcggtgaaactgtctcg
attgagggacttccccctgctatccgttgttctgaagagcgaatgaaggagaatgaagct
tatctgcttgagaatgcagttagtttgtttctatggatcggacaatctgttgatccagcc
tggatacaaaatgtcttcggtgtccaaagtgcggcacagattgatattgacttggtcaac
cttgttgtttatgataatgaagattcaagaaaacttcgtgatctggttgctaagttacaa
gcatcacgaaatcgtcaaatgaagttcactattgtacgacaacgagataaattggagcca
tggtttaaacatttgttggcagaagaccgtggagctggtggtgctacttcatatgtggat
ttcttatgtcatatgcacaaagaaatacgagctttgctgaactag

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