Ciona intestinalis (yellow sea squirt): 100186260
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Entry
100186260 CDS
T01056
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100186260
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100186260
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100186260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
PA
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-ANAPC11
DUF4381
zf-C3H2C3
PHD
zf-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
100186260
NCBI-ProteinID:
XP_026694392
LinkDB
All DBs
Position
1:complement(8081660..8092395)
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AA seq
439 aa
AA seq
DB search
METRNFHLFFSIFLSGLSSSHGVVVAYDRFNITEQFSDYPAEFGTSVGPDGLDGILMAAE
PLDACKPVKERPYPASTFMPNITFNAFALVIRGGCDFALKVLNAQKAHYNSVIVYNDVSN
DIVRMNTNQPDIANQIVIPSVFVGNDAGIILSQNYLYNNKNIPIIKITGGESPFSLEYYI
IPFVTVLATCIVVLLLFMFVRYLRDRRRQRRNRLSRRRLKQIPTKQFKKGDEYDVCAICL
DDYEEGDTLRILPCQHAYHCKCVDPWLTSSRRVCPLCKRRVLSDDESSESESEYDSDEER
APLLSQSSPDSSPNSSRRATGFRANPLTFTNSSASSYMEETDSSDEDHALTPPASLSTLH
GTDATFVSHPHPVDRNVSSPAVVMPTDVSSSPEVRSSLEVYSCISGEDSLASSFRDAHDV
LVVQHGSEQDPDQQNTTVT
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggagaccagaaattttcatcttttcttctcaatatttttgtctggattatcatcaagt
catggagttgtggttgcttacgatcgtttcaacataaccgaacagttcagtgattaccct
gcagagtttgggacaagtgttggacccgatggacttgatggcatactgatggcagctgaa
cccctcgatgcttgcaagccggtgaaggaacgtccttaccctgcttcaactttcatgcca
aacattacgtttaatgcatttgctctcgttataagaggaggctgtgattttgctcttaaa
gtactaaatgcacaaaaagcacactacaacagcgtgattgtatacaatgatgtgtcaaac
gatattgtgcgcatgaatacaaatcaacctgatattgccaatcaaattgtgataccatca
gtatttgttggcaatgatgctggcatcattttgtctcaaaactatctgtataacaataag
aatattccaataataaaaataaccggcggagaatctcctttttctctcgaatattacatt
atcccttttgtgaccgttctcgcaacctgcatagttgtacttctattatttatgtttgtt
cgatatcttcgggaccgcagaaggcaaagaaggaacagattgtcgcgaagacgactaaaa
caaataccaacaaagcaatttaaaaaaggtgatgaatacgatgtttgcgcaatttgtctc
gatgattatgaagaaggagatacactacgaatattaccttgccaacatgcctaccattgc
aagtgcgttgatccctggcttacaagcagcaggagagtttgtcctctttgtaaacgaaga
gtgttgagcgatgatgagtcttccgaatcggaatctgagtatgattccgatgaagaaaga
gctcctctcctctcacaaagttctcctgattcctctcccaactcatcaagaagagcaact
gggtttcgtgcgaaccctctaactttcacaaactcaagtgcttccagttacatggaggaa
acagactcttcagatgaggatcatgccttgactcctcctgcatcgttgtccaccctccat
ggaacggatgcaacatttgtgagtcacccgcacccggtggatcgaaacgtctcctcccct
gcagttgtgatgcctacagatgtttcctcttcaccagaagttcgaagttcacttgaagtt
tacagttgcatcagtggtgaggatagtttggcaagctcattcagggacgctcatgatgtt
ctggtagtgcaacatggttctgaacaggatcctgaccaacaaaacactacagtgacctag
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