Ciona intestinalis (yellow sea squirt): 100186792
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Entry
100186792 CDS
T01056
Name
(RefSeq) ADAMTS-like protein 1 isoform X1
KO
K24429
ADAMTS-like protein 1/3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100186792
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
100186792
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
I-set
Ig_3
Ig_2
TSP_1
ig
TSP1_CCN
TSP1_spondin
V-set
V-set_CD47
ADAMTS_CR_3
C2-set_2
ADAMTS_spacer1
Ig_6
Motif
Other DBs
NCBI-GeneID:
100186792
NCBI-ProteinID:
XP_026689948
LinkDB
All DBs
Position
4:5455262..5504521
Genome browser
AA seq
1941 aa
AA seq
DB search
MKCMRLLQLYVLVICAVLLSFAREGLFSPLDKPTNPSHNTPQNVENNGLDWGAWSSWSEC
SRSCGGGASYSRRVCLTDSCEGINTRYKTCENQDCTETTQDFRAEQCSLYNTTPYKGILY
TWKAVVQKAQPCALYCKAHGFNITTKLAPQVLDGTKCKDNSDDMCINGACQAVGCDKKLH
SDARYDVCGKCQGDGSTCRLVTGLHRFNPVKHRGTEVVITVPQKSRHISVSERGSGHIGL
LLRETDEFDIFVPNKTKDENQGVLEHSGIVVEYGSVASGKEYLDVAGPVPQDMKVLALYD
DTMWKYIRYEFYRPLVVFWKHDETSARCPVTCGAGVTFIKPICVDMASGEQRDDEACHAE
GITPPLPKVFRCKLEDCPIRYESGRVGSTFEFVQRARWLTQPWTECSASCDGGFQTRTIS
CAEDNIYGDPIETVGDTLCHNAGIPVPVSQRRCNEHPCPEWITYPWSQCSASCGAGWRYR
TVQCQGYDGTPAFKCSKMTKPIVRQLCFKSMMCPAPGRRISIPTHNETLAARGVQRVDLV
LSRPNWMTDTWGDCSHTCGAGVATRVVACKAAAGGRLETVPDDECVGEKPITTTRCSMGA
CRLEGYQNAQDDQDDQADQDDQADQDAQNDQETQDDQNDQDDQDAQDDQNNQDDQDDQDD
QDAQDDQETQDDQEIQGAQDDQDTDYYDTVDQTDQEDENEDDFEVVEDFAAFTRVIYSAH
NPVPEEVSDEFDPLDLENYEWRFSDFSSCTPPCGRGFQYSKQFCHHRVTGAMVSEDRCDV
TMKQTNKSLSCIGEPCDVIRSTFSSPNSSMRWELGQFGECSVTCGRGVQTRMVECRYMPE
GVDQSHASRGEPRPDLMCPSPKPESETSCSLVACSPEWVPEPWTKCSRTCGRGEQERELM
CMQRLGTGETVQVSKEYCSRKKLSTKRSCGLRHCPARYIVRPWSRCPPRCGKSQSIRKHA
CVQLLAGKTKPVIVDLRRCSKQRRPITRKPCNNPACPSIRKSPDPVFVQTTKEAKVRLQV
GTTASIFPKTTVIVRCKTDRFRKQNLVWKYHGRPITSRHGHLSILKDGSLRILRVAKPDE
GVYVCMAGVVRANFVLKIITNDTDDATPPPRNFFPITHYPRRETGPRVYLKQPSQRRLKP
ITHIDNIDDNERDLGTTTSRFDFPRTVAMAPRDPLPPVLKIPELSYGIQQLAIERVEPRS
SRRPSLSVSPVNIQRDQQAPDVVNIPSEPLSPEFQIRTPSFPEPTSEEDLALHRFLMQQA
NLETPDVHLLEKFQRTPSSLLPTSVEDDDLPFPFRETEIAVDNQRSRSGIRSVDNTAVVK
AIGGLGERPRNMHRPSIITQPTVAPRQLEREVIVYVGGNVIVSEITEVITILCEATGDPV
PHISWYRDNTPLPAANNRRQYVLEDNAFRIIHPEASDTGSYVCVASNMYGNDSKTTPLTV
TQKPRILSTIDSLEDFESDVIEATIGSDIRAKLGARIRLRCPTAGFPEPYVDWKKDGPGL
LQNSNVLTDNTLEIFPARKADQGIFSCEASNPAGSDYQASSLVLVDPPHLDDLNTKANID
GLPELLLTTTDTQQYNVKVNSAVMMGCPVKGFPEPRVTWSFNNTSIFELGTTLDYQLMDQ
MKILQIPNADSNTEGTYTCHAINDGGNLTTSLRLSLVVYSYEYGEHTPCSASCGDNGLQY
RRLMCMEDGVKEVDEWYCIGVTKPNVYMEPCGRRDCPPRFLAGRWGTCSATCGNGTRTRA
LGCGILMADGSTREVAVEFCGVNETRPITSETCYAERCPWWQPRPWRRCSRKCIGRGMSV
RTRRILCVSGNGTTIERRSACKHLPKPRRRMLCPNARCKPIWVASTWSVCSKRCGGDGIR
TRILNCVYKGRRRQPAGSLCSSRHRPLVSIPCNRSQCHEGQNSLGSHNTTVPCVNKSPSC
RYVRRKGLCLYYKRICCQTCS
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtatgagacttctccaactttacgttctggtgatatgcgcggtgttgttgtca
tttgctagagaaggattgttttcacctctcgataaacccaccaaccccagccataacaca
ccacaaaatgttgaaaacaacgggttagattggggtgcgtggagttcctggagcgaatgt
tcgcggagctgcggcggtggtgcttcgtattcacgacgtgtgtgtctcacggattcgtgc
gagggcatcaacactagatacaagacatgcgaaaatcaggattgcacggagactacacaa
gatttccgggcagagcaatgttctttatacaacaccacgccatacaagggtatcttgtac
acgtggaaagctgttgtacagaaagcacaaccttgtgcactttactgcaaggctcatggc
tttaacataacgacgaagttggcaccacaagtgctcgacggaacgaaatgcaaagataat
tctgacgacatgtgcattaatggggcgtgccaggcagttggctgcgataaaaagctccac
agtgacgcaagatatgacgtttgcgggaagtgccaaggtgacggaagtacatgccggctc
gtaactggtttacaccggtttaatccggtcaaacaccgcggcaccgaagttgtgataaca
gtcccgcaaaaaagccgacacataagcgtgtccgaacgtggttcaggacatattggtctt
ctcttaagagagactgacgaattcgacattttcgtgccgaataaaacgaaagacgagaat
cagggagttctggaacattctgggattgtagttgagtatgggtcggtggcttctggtaag
gaatatcttgacgttgccggtccagttccccaagacatgaaagtgctcgcgctctacgac
gacaccatgtggaaatatatccgctacgaattctatcgaccgttggtcgtattttggaaa
catgacgaaacatctgctcgctgccccgtcacttgcggcgctggagtaaccttcatcaaa
ccgatctgtgttgacatggcaagcggagaacaaagagatgacgaagcttgtcacgctgaa
ggtataacccctcccctacctaaggtgtttcgttgcaaactcgaagactgcccgatcagg
tacgaatctggccgcgttggatcgacgttcgaattcgttcaaagagccagatggcttaca
caaccctggaccgagtgttcggcttcgtgcgatggcgggttccaaactcgcaccatttca
tgcgctgaggataatatatatggtgaccctattgaaacggttggagacacactttgtcat
aacgctggtatccctgtaccagttagtcaaaggcgatgcaacgaacatccatgcccggag
tggatcacatacccatggtcacagtgttccgcttcttgcggcgctgggtggcgctacaga
acagtccagtgccaaggctacgatggaactcccgcattcaaatgtagtaagatgacaaag
ccgatcgttcggcagctttgctttaaatcaatgatgtgccccgccccaggtagaagaata
tctatcccaacacacaacgaaactttagccgcaagaggggtgcaaagagttgatcttgtt
ttaagccggccgaattggatgacagatacatggggggattgctcccacacatgcggtgcc
ggtgttgctacgagagtggtcgcgtgtaaagctgctgcaggtggaagattggaaaccgtt
cctgatgatgaatgcgttggagagaaaccgattacaaccacgcgatgctccatgggggcc
tgtcgtttagagggataccaaaacgcccaagacgaccaagacgaccaagccgaccaagac
gatcaagcagaccaagacgcacaaaacgaccaagaaacccaagacgaccagaacgaccag
gacgaccaagacgcccaagacgaccagaacaaccaggacgaccaggacgaccaggacgac
caggacgcccaagacgatcaagaaacccaagacgaccaagaaatccaaggcgcccaagac
gaccaggacacggattattatgacaccgttgatcaaaccgaccaagaagacgaaaacgag
gatgatttcgaagtagttgaagattttgccgcctttacccgtgttatatacagcgctcat
aatcctgtacctgaggaagttagtgacgaattcgatcccttggatttagaaaactacgaa
tggaggtttagcgattttagctcgtgtacgccgccttgcggccgtggattccagtattcg
aagcagttttgccaccacagagtaacgggcgcgatggtatcagaagaccgctgtgatgtc
acaatgaaacaaacgaacaaatcgctttcctgcatcggtgaaccgtgtgacgtcatcagg
tcaacttttagctccccgaatagcagcatgaggtgggaacttgggcagttcggagagtgc
agtgttacgtgtgggcgaggagtccaaacacgaatggtggagtgtcggtacatgcctgaa
ggtgtagaccagtctcatgcatcaaggggggagcccagacccgacctgatgtgcccatct
cccaaaccagaatctgaaacatcgtgttcattggtcgcatgctccccggaatgggtcccg
gaaccttggactaaatgtagtagaacatgcgggcgaggtgaacaggagagggagctaatg
tgcatgcagaggttggggactggggaaactgtgcaagtttccaaggaatattgctcaagg
aaaaagctaagcactaaaagaagttgtgggttgagacactgcccggcaagatatattgta
cgcccgtggtcacggtgccccccgcgttgtgggaagagtcagagcatccgtaagcacgcc
tgcgttcagctccttgccgggaaaacaaaacctgttattgtggatttacgaagatgctca
aaacaacgacgcccaatcaccaggaagccatgcaataaccccgcatgcccttctatcaga
aaaagtccggacccggtatttgtacaaaccacaaaagaagccaaggttcggctacaggtc
ggaaccacagcttcaatatttcctaaaacgaccgtgatcgtccggtgtaaaactgacaga
ttccgtaagcagaaccttgtatggaagtaccatggtaggcctatcaccagcaggcatggg
cacctatctatcctaaaggatggctcactgaggatcctgcgtgtagcaaaacctgatgag
ggcgtttacgtttgcatggcaggagtcgtaagggcaaattttgtcttgaagatcataaca
aacgatacagacgatgcgactccacccccaagaaatttcttcccaatcacgcattatcca
cgacgggaaactggtcccagggtttatttaaaacaacctagccaacgtagactcaaacct
ataacgcacatcgataacatagacgacaatgaaagggacttaggaaccacaacaagtcga
tttgatttcccacgtacagtggcaatggcacccagagatcctctacctccagtattaaaa
atacctgagctctcctacggcatacaacaactagcaattgaacgagtggaacctcgtagt
agtagacggccatccttgtctgtatctcctgttaacatacagcgagaccagcaagcacca
gatgtagttaacatcccaagcgaaccgctaagccctgagtttcaaattcgaacccctagt
tttccagaaccaacttctgaagaggatttggcattacacaggttcctgatgcaacaggcg
aacttagaaactcctgatgttcacctcttggagaaatttcagagaaccccatcatcgttg
cttccaacatctgtagaagatgacgaccttccgtttccgtttcgtgaaaccgagatcgca
gttgacaaccaaaggagcaggagtgggattcgaagcgtggataacactgctgtggtgaag
gctataggcggacttggagaacggcctcgaaatatgcatcggccatctattattacccaa
ccaacggttgcaccgcggcagttagaacgagaagtaatcgtctacgtaggtggcaacgtc
attgtttccgaaataacagaggtcatcacgatcctatgcgaggcaaccggtgatcctgtg
cctcatataagctggtatagagacaatacacctttaccggccgcaaataaccgaaggcag
tacgtgttagaagacaacgctttccgtatcatccatcccgaagcttccgacactggttcc
tacgtttgtgttgcttctaatatgtatgggaacgattcaaagacaaccccactaaccgtg
actcaaaaacctcgaatcttgtcaaccatcgactcattagaagacttcgagtcagatgtc
attgaagcgaccataggttcggatattcgggcaaagcttggcgcaagaataaggcttcgg
tgtcctactgcaggttttccggagccttacgtggattggaaaaaggacggcccaggcttg
ttacaaaattcgaacgtgctcacagacaacacacttgaaatattcccagctcgtaaagcc
gaccaaggcatcttctcatgcgaggcatccaatcctgctggcagcgattatcaagcttcc
tctttagtattagtcgacccaccacatttggacgatttgaacaccaaggcaaacatcgat
ggtttacctgagttattgctcaccacaactgacacgcagcaatataatgttaaagtcaac
agtgctgttatgatggggtgccctgtaaaaggatttccagaaccgagagtaacctggtcc
tttaacaacacttctatattcgagttgggcacgactttggactaccaacttatggaccaa
atgaaaatcttacaaatcccaaacgccgactcaaacacagaagggacatatacttgtcat
gcaatcaatgacggaggcaatcttacaacaagtttacgtctcagccttgtagtttactcg
tacgagtacggggagcatacaccatgtagcgcatcgtgtggggacaacgggttacaatac
agacggcttatgtgcatggaggatggggttaaagaggtggacgaatggtattgcattgga
gtaacgaaacccaatgtatatatggaaccttgtggaagacgagactgtccaccaagattt
ttggctggtcgctggggcacatgctctgctacgtgtggaaacggcacgaggactcgggcg
ctcggatgcggaatattaatggcagatggaagcacgcgagaggtcgccgttgagttttgt
ggggtgaacgagacacgacctattacatcagagacttgctacgcagaacggtgtccgtgg
tggcaacctcggccgtggagaaggtgtagccgaaaatgcatcgggaggggtatgagtgta
agaacgcgacggattctttgtgtatctggcaacggtaccaccatagagaggcgttctgct
tgtaaacacttgccgaaacctagaagacgcatgctttgcccgaatgctcgctgtaagcca
atatgggttgctagtacttggtcagtatgttcgaaacgatgcggcggggatgggattcga
acccggatcctcaactgcgtatacaagggaaggagaagacaacctgcaggctctttatgt
tcatcacggcatcgacccctcgtttccattccttgcaataggtcccaatgccacgaaggt
cagaacagtttgggatcccacaatacaacagttccatgcgtcaacaaatccccatcgtgc
cgttatgtgagaagaaaaggactctgcttatattacaaacgaatttgttgccagacttgc
agctaa
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