Ciona intestinalis (yellow sea squirt): 100187028
Help
Entry
100187028 CDS
T01056
Name
(RefSeq) zinc finger protein 608
Organism
cin
Ciona intestinalis (yellow sea squirt)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
100187028
NCBI-ProteinID:
XP_018670716
LinkDB
All DBs
Position
1:8277013..8300858
Genome browser
AA seq
1956 aa
AA seq
DB search
MSSEAILTSQRTAGSPTTKSIFSPSSDKDSEERTDAKIDASNRDDVSSGDDDWNDDFGKL
VIDLETENDGEKASKESSRQQIKNNNNNNSSGGSPCTGKVSNNEKLSSNQAKGALKNSIV
QSTASGVGKSVKSKPKKKSSSKHHGSAASSRTSSPTAPNSELTGQVQSKSSHTCAASDSR
SSGLGSTAPRASNSPDEASGKKKSSKSGRSHHKKHKHSSEKNEAKADGEKSKSKSKHSSC
TNSPTSSGSHYLSNHVTNTSASLSVSNKPQSYHRSASPSISAISTPSSCASKFPHMPQSR
TPVRTPLAPAATAGVKLSTNDKDSSESCHSQHSRKKHRKGLSGSGLTSLGSCLQSSTVVT
SHPRVDASAVDPPQFRSFGNSGKRDRNAQSHSNTAGEGTGPKKMKLEMDTKSLSKEENRS
KTSANIPSPCHEANTKLPSPKTATSPGNATLIPATFETKPGMKASDRFAASSATVSPPVF
APSSIFATSIAKFGDTHTSPVWSSGSGNSHAEESRKKPQTSQRSVGTLTLTADVGVMTEP
DALGPCEPGTSVHLDGIVWHETDTGVLVVNVTWRNRTYMGTLLDATKHDWAPPRFSDSDL
DIELRGKNGRPKRQRGTTGDSTSSRKGRSRGNQALADDVKGSPSTAAKRRGKNSESESLN
DDVSTSRSASKRARVVPSRGASNSSVQQDRGTNGSNGSESSTCSSPVFIDCPHPKCNKRY
KHINGLKYHQAHAHLDFENVKEESEMKEDAETKDSEAGSTVSSREDTESKTSDSEAASKE
PTTKPSSSIVDVAMETPLTDSVAPSGDQTKVTFMTIDAAVNEIERANIEAGAVSCQEPFK
FPSEVIPQIVPVPADPLPTTHVIPPNTTTTSVPSELNQSNVSSLSTTSLSTSYADSMQNN
VSKPSAQLYPVVPPSIPQPQEPGAGDSEIALAVKALLQTQDSQDDLPGLTAPYSQDSPPP
TLSLVSRSAPTAMQNHMETTQSFSSAYPRQPSSVYPGTAMYPRSPASDEVPISSQSLRSH
LLATMTTQNGHPFESVTTPVSNVPTSSMPRSVPQSVPQDTITNTTSPSSVQLPGTKEHFL
PTAPPHPSTHTGNKMAKGKTVPIPVDPNHGLMISPTNPHGGSPGNQPNSAKKVKKSKKKP
DGRPTGASDCESTRSTEGPYSVKQESHSNQDGQNAPSGFPANGAAAVLNNLATSYQNDQQ
KIQQTTPRSEQVTGSSQMVIKSEPGVRFPPSQHFNQHLGMSMQNGRKLPGIVMPSSSVSG
GQFTNNITVTGTFHPHPDPHKPQTAVSAQAQDRQRTARVSPSPSSSNRNNNNKLPGKEQA
EAKARVPAVHQEHSQPTNLSDISAPDSTMNHRPKYSSAKSPANITSQPKDRQAEISTMGK
FQDKMISTIESAYAGSRPTPRSKASTPQLEVPRPEPNTVRSRPCTPKEQRPMYEDSRPKP
PVASPVVPRPRLPLDSVQPIPRAPGSPKLPVDLQQLNQRGPYLQSIYNYPLQNYGFVDGY
QALLDPVAVRQQQQYMEYLSEMQKQQLHHLQQQQHIQQVQQQAHFQQQQQQAQQAQMQAE
KKNRKPLEPHPPKIAPKVEVAPIKPTPQNPATSLSEKGGPWVGGPHMKRHSTGSISPLQN
HIPKEKPHGPPQPHHPSPTVLHPRYKSPQPSSHPQISHTTPTHNRSHSVTVNPLAGVSGS
PSLPQPHPRSEIQERTRRLEPPPRDEGKIPIRKPATPTSRSGDGSPEKMKDGHPASLYRS
HVESPGHLQYYAAAQYQQVFDPSRPSYRLPYSVHGLPPGTQIGTPIFPAQAQWGPQHPAM
GKHSPGPVKQAARDIPPNAPRSPREDHPQRGRPETKGRENFVHNSSKERRVREVPPIPRK
LSRSPDPKSARHQAPTPLEKPSRSHTPNSNPDRAPSPPTQRHLHTHHHIHEGVTPYHPII
PQHYGYPAPIAAQPVIAANTEAMAAGYPGQFPSKRD
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaagcaattctgacgtctcaaaggacagccgggtcgccaactactaagtcg
attttctcgccttcgagcgataaagacagcgaggagcgcaccgacgcgaaaatcgatgcc
agcaatcgtgatgacgtcagttccggcgatgacgactggaacgacgacttcggcaaactc
gtcatcgacctggagactgaaaatgatggcgaaaaggccagtaaagagtcgtctcgccaa
caaatcaagaacaacaataacaataatagttccggcggaagcccttgcactggaaaagtt
tcaaacaatgagaaattaagttcgaaccaggcaaagggcgctttaaaaaactcaatcgta
cagagtactgcttcaggtgttggaaaaagcgtcaaaagtaaacccaagaaaaagtcatct
agcaagcaccatggttcagctgctagctctagaacctcgtcgcccacggcgccgaattct
gagcttacgggccaggttcaaagtaagagcagtcacacgtgcgctgcctccgattctcgg
tcatcgggtctcggttcaacggctccgcgggcttcgaactctcccgacgaggcaagtggc
aagaaaaagtcgtcgaagtctgggcgcagccaccacaaaaagcacaaacacagttcggag
aaaaacgaggcgaaagcagacggcgaaaaaagtaaatcaaaatcaaagcactcaagctgc
acaaactctcccacaagctctggcagtcactacctatccaaccacgtgaccaacacaagc
gcatccctctctgtgagcaacaaaccgcaaagttatcatcgcagcgcctcgcccagtata
agcgcaatttccactccgtcgtcgtgcgcttcaaaatttccgcacatgccgcagtccaga
accccagtccgtaccccccttgcccctgcagctaccgccggggtgaaactatctacaaat
gataaggactcttcagaaagctgtcactcccagcacagccgcaaaaagcacagaaaaggt
ctgtctggtagcggtcttacgtcacttggcagttgccttcaatccagcacagtcgtgact
tctcatccgcgcgttgatgcaagcgcagtggatccaccccagttccgatcgtttggcaat
tcaggaaagcgtgacaggaatgctcagtcacactcaaatacagccggcgaaggaaccggc
ccgaagaaaatgaagctggaaatggataccaagagtttatcaaaggaggaaaaccgttca
aagacttcagccaatataccaagcccttgccacgaggccaacacaaaactcccgtcccca
aaaactgcgacttccccgggaaatgcgactctgattcccgccacgttcgaaacgaagccc
ggcatgaaagccagcgaccgtttcgccgcctcttccgccaccgtttccccgcctgttttc
gcaccgtccagtattttcgccacgtcaatagcaaagttcggcgacacgcatacttcgcct
gtctggtcatcgggcagcggtaacagccacgctgaagaatcaagaaagaaacctcaaact
tcacaacggtctgtgggaacgttgacactaacagcagatgttggcgttatgacagagcca
gacgccctgggtccgtgtgagccaggcacaagtgtacacttggacggaatagtatggcac
gaaacagacacaggcgtactcgtagtgaacgtgacctggcgaaaccgcacctatatggga
acactgctagacgcaacgaagcacgactgggcccctcctaggttttcagattccgatctt
gacatcgaacttcgtggtaagaacgggagaccgaaacgtcagcggggaaccaccggcgat
tctacgtcatcaagaaaaggtcgtagtcgtggaaaccaggcacttgctgatgacgtcaaa
ggaagtccgtctaccgccgccaagcggcgcggaaagaattccgaatcggaatcattaaac
gatgacgtcagcacatcgcgttcggcgtcgaaacgtgcgcgtgtggtgccctctcgcggt
gcaagtaatagcagcgtgcaacaagacagagggaccaacggttcaaacggaagtgaatct
tctacctgttcatcaccagtctttattgattgccctcacccgaaatgtaataaaagatat
aaacacatcaatggattgaaataccatcaagcacacgctcacctcgactttgaaaacgtg
aaggaagaatccgagatgaaggaagatgcggaaacaaaggacagtgaagcgggatcaact
gtttcttctcgggaggacacagagtcaaaaacctcggactcggaagcggcctcaaaagaa
ccaacaacaaaaccttcatcttctatcgtcgacgttgccatggaaacaccgcttactgac
tctgtggccccatctggtgaccaaactaaagttacatttatgacaattgacgctgcagtt
aacgaaatcgagcgagcgaatatagaagcaggggctgtgtcatgccaggaaccattcaag
ttcccaagcgaagttatcccacaaatagttcctgtacctgctgaccccctcccaaccacc
cacgttataccacccaacacaactacaacttctgtaccaagcgagttaaatcaatctaac
gtatcaagcttgtccaccacttcactcagtacttcatatgctgatagtatgcagaacaat
gtatctaaaccaagtgcacagctgtatcccgttgttcccccatccataccccaacctcaa
gagcctggtgcaggggatagtgaaattgctcttgcagttaaagccttgcttcaaacccag
gattcccaggatgatctaccaggcttaacagctccatacagccaggattctccccctcca
actctatcccttgtctccaggtctgccccaactgcaatgcaaaaccacatggagactaca
cagagtttttcaagcgcatacccccgtcagccttcctcagtatacccaggaaccgctatg
taccccaggtcaccagcttcggacgaagtcccgatttcttctcagagcttgcgcagccac
ttgttggccacaatgactacacaaaacggacatccatttgagtctgttaccacaccagta
tctaatgtccctacatctagcatgcctcggtctgtacctcagagtgtgccgcaagatact
ataacgaacactacgtcacccagcagtgttcagctgccaggaactaaggaacatttccta
cccacagccccaccccacccaagcacccacacgggtaacaaaatggctaaaggaaaaaca
gtcccaataccagtggaccccaatcacgggttgatgatttcacccactaacccacacgga
ggatcacccggcaatcaaccaaactctgccaagaaagtgaaaaaaagtaaaaagaaacca
gatggtcgtcccactggtgcatccgactgcgaaagcacgaggagcacagagggcccatat
tcagtgaaacaagaatcgcattcgaaccaggacggtcaaaatgctccatcgggtttccct
gcaaacggggcagcagcagtacttaataacttggctacatcataccaaaatgaccagcaa
aagatacagcagaccactccaaggtcggaacaggtaactggttcgtctcaaatggtcatc
aaatctgaacccggtgttcgtttcccaccttcacaacatttcaaccaacaccttggaatg
tcgatgcaaaacgggagaaaactgcctggcatagtgatgccttcttcctctgtgagtggc
ggacagttcacaaataacatcacagtcaccggtaccttccatccccaccctgacccacac
aaaccccagacagcggtatccgcccaggcgcaagatcgccagcggacagctcgtgtctca
ccctctccttcatcgagcaaccgcaacaataacaacaagttaccgggtaaggaacaagct
gaagccaaggccagagtccctgccgtacatcaagagcattcacaacccacaaacctaagt
gatatttcggccccggattctacaatgaaccaccgcccaaaatactcaagtgccaaaagc
ccagccaacattaccagccaaccaaaggacagacaagcagagatttccacaatgggaaag
ttccaggataaaatgatcagcacaatagaaagtgcttatgctggttcaagaccaactcca
agaagcaaggccagcaccccacaactggaggtgccgagacctgaaccgaacactgtccgt
tcaaggccttgtacaccgaaagaacaaagaccaatgtatgaggattcccggccaaaacct
ccagtggcaagtcctgtcgtgcccagaccaaggctaccccttgatagtgttcaaccaata
cccagagctcctggaagcccaaaactgccagttgatttacagcagttaaaccagcgcggt
ccatacttacaatcaatatataactacccactgcaaaattatggtttcgtggacggatat
caagcattattggacccagttgcagtaaggcaacagcagcaatacatggaatacctcagt
gagatgcagaaacaacagctgcatcacctgcaacaacaacagcacatacaacaagtacaa
cagcaagctcattttcaacaacaacaacagcaggcacaacaggcgcaaatgcaagcggaa
aagaaaaaccgaaaaccccttgagccccacccacccaagattgcccccaaggtggaagta
gccccgattaaacccaccccacaaaaccctgcaacatccttgtcagaaaaagggggtcca
tgggttgggggtccccatatgaagaggcattcaacaggctcaatttctcctcttcaaaat
catatccctaaagaaaagccccacggccctccacaaccccaccacccctcacccactgtg
cttcaccctcgttataaatccccacagccgagttctcacccccaaatctcgcacaccacc
ccaacccataaccgttcccactctgtgacggtgaacccccttgctggggtgagtgggtca
ccttccttaccccaaccccacccacgctctgaaatacaagagcggacaaggcgcttggag
cccccacctcgggatgaaggcaagattccgattagaaaacctgcaacccccacttctcgt
agcggcgatggtagtcctgaaaagatgaaagatggccaccctgcttcactgtatagatcc
catgtagaaagtccaggccacctacaatactacgctgcagctcaataccaacaagtgttt
gatccatctagaccaagctacagactcccctacagtgtgcatggccttccaccaggtacc
caaataggcaccccaatatttcctgcccaagcacagtggggacctcagcacccagcaatg
ggtaagcactcccctggccctgtcaagcaagcagcaagggatatacctccaaatgctcca
agatcaccaagagaagaccacccccaaaggggccgacctgaaacaaaaggacgagaaaac
tttgttcataattcctccaaagaaagaagagtaagagaagtccccccaatacctcggaaa
ttgagtcgcagccctgacccgaagtctgcacgccatcaagcccccacccctttagaaaag
ccaagtagaagccatacacccaacagtaaccccgaccgagccccctccccacccacacag
cgacacttacacacccatcatcatatacatgaaggggtaaccccctatcaccccattata
ccccagcattatggataccctgcaccaattgctgcacaacctgttatagctgcaaacact
gaggcaatggctgctggatatccaggacaatttccctcaaaaagggattaa
DBGET
integrated database retrieval system