Ciona intestinalis (yellow sea squirt): 100187226
Help
Entry
100187226 CDS
T01056
Name
(RefSeq) eIF-2-alpha kinase GCN2 isoform X1
KO
K16196
eukaryotic translation initiation factor 2-alpha kinase 4 [EC:
2.7.11.1
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100187226
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cin01001
]
100187226
Enzymes [BR:
cin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100187226
Protein kinases [BR:
cin01001
]
Serine/threonine kinases: Other
PEK family [OT]
100187226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
RWD
tRNA-synt_His
HGTP_anticodon2
Kinase-like
APH
ABC1
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
100187226
NCBI-ProteinID:
XP_018669174
Ensembl:
ENSCING00000020338
LinkDB
All DBs
Position
10:complement(3915902..3943215)
Genome browser
AA seq
1650 aa
AA seq
DB search
MTMTESESYQERQENELELLHSIFGEEIEDLRKLDKWKVVRPPEIILYLHPQEGMSGKKE
TFTKIDLKIKFTPTYPDSFPECKLENAKGLSEDAINDLESGIKNLYKSLQGEVMVLEIAQ
FVKEFLHTHNVPQCNSVYEEMVKNKQRQLEKAAQEEEKKKEIERRKKELKRKEIEEELAR
RQNEEKQIRKLMREGRDQNQSSQDHTRRLSEDIPNGNGSHGKSTGVVDLKINGKLPRIIH
KGQTLDYIGRSTQKLKKIQKHIEICHLNTTSSGSNGSTVYAGMDANTGELVAVHYWNIPC
PMRNSMLTDAERAKLDKYMKTINTIEQELNSLVKFSHKHLVPYLAMRYSHVESSIELHIV
EKYITGASLQQKLTSRDRVGIDAVRTYSEQLLSALDCLHKKSVVHKNLKASSVFLSTKGS
IKLADYSIEKRVIDLHNESRIEQPGVRFSEDRIPARNTKKGDILRLGMLILSLAQGQTIQ
DYPPEIPASFPLVFQNFLEKCLVVEDRLRYTTSELLDHEFIKPSVTSPILDIDLPLEQNP
SPFDEDKMDDVLATSDAPRPTLSRLHSEFEKLEWLGKGGYGDVVKVKNIIDGRDYAIKRI
LLNPHRSLFNKKITREVKLLSRLNHENVVRYYNSWIETVECWEDDVSTNSSNPTTTTTTT
NETKSNVSDRINSLGFYDNIEVLAPPPVASSVSDWSVSLEEVSRCRDDEEDDDEDVFKTI
YVDEDDSESIKFDHSDEEEDEMVEESTNDGKTSRSEETTVTSSASSKSLVTQRFLYIQME
YCEKSTLRQTIDAGVCNEPERMWRLFREILEGLVHVHEQGMIHRDLKPQNIFLDKNDHVK
IGDFGLATAQARVTLADSSEEISKSETGDSVYSGVVGTALYVAPELMVTGKRSLYSQKVD
IYSVGIIFFEMSFPGIQTKMERVKVLGNLRTSSITFPSDFDEAAMPREAEITRWCLDHVP
NKRPTASELLKCRLVPTPVLEESNVLEAVREMLSNPDSKPYRLVMDEVFNQPENPTSSVI
YDIEMHKKHFSETQNVAQQQTFDIISSLLRCHGAVRVNPPLLLPKCGSENDANEAAVLIG
VGGNVVSLPYILRIPLARFILCKGITNIKTYAIEKVFRARKYARSRPKELWECSFDIISP
SVGGLAPDAEVISVVSEIISQFPSLSSQKYEVRINHLLALESILTYCGLDESHHTEALNA
LASCSGLSKTQLHNCINSLPLNAQQVASLLTFIQVQGPLSRVQTSLRSITRNKHSPASSR
ARQALHELEALRKNLDSLNLTLPVVFDLGYSHKHHNHYNGIIFKVSAEIQKKKRTAIDVL
AIGGRYDKLLTTMSVFNMYDRDGEQKLTPKHAVGVSIAVEKIVGSVMEENNLPSSTSMSG
SNDPTVTSQLSHHAAVDVLVCSVGRTLLLHERLRVVRSLWEASIAAETVYDRGAMESMQE
VQEKAQERGIRHLVFLSEKESGSPLVRSLTHDPLLRSTERRVPLDQLVDYLLKRLKEVES
TVSMKSSSSGFSASHESSTVTMTNNSARQISIEVVPPEKLASHLRKRYESEVMTKLTSLP
MMSHIQSKAQICALAVELPSPVMKSMGCALDLSHSEEEFNSSLAHHLHTVSKYKKYLSYI
AERICEAKFEREMTFIILYSYKDHGYCLLI
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgacggaaagtgaatcctatcaagaaaggcaggaaaatgaacttgaattgctt
cactccatatttggtgaggagattgaagatctgaggaaattggacaaatggaaggtggtc
cgtcctccagagatcattctctatcttcatccacaggaagggatgagcggaaagaaagaa
acttttaccaaaattgacctcaaaataaaatttacaccaacttacccagacagtttcccc
gagtgtaaactggagaatgcgaaaggtttatcagaagatgccataaatgatttggaatct
gggattaaaaatctctacaagtcattacagggtgaagtaatggtgctcgaaattgctcag
tttgttaaggagttcctgcatacacacaatgtcccacaatgtaactcggtgtacgaggaa
atggtaaaaaacaaacaaagacagcttgaaaaagctgcacaggaagaggaaaagaaaaag
gaaattgaaagaagaaaaaaggaattaaagaggaaagagatagaagaagaactagcaagg
aggcaaaacgaagaaaaacaaattcgtaaacttatgagggagggcagagatcagaaccaa
tcatctcaagaccacacacgccgactttctgaagatattccgaacggcaatggcagtcat
gggaagtctacaggagtcgtggatttaaaaatcaatggaaaacttccacgaataatacat
aaagggcaaacattagactacattggaagatccacacaaaaacttaaaaagatccagaag
catatcgagatctgccatttaaacaccaccagtagtggtagcaatggatcaacagtatac
gcgggcatggatgcaaacacaggtgaactagttgcagttcattactggaacataccatgt
cctatgaggaattcaatgctcactgacgcagaacgagctaaactcgataaatatatgaaa
acaattaacacaattgagcaggagttgaattctttggtgaaattctcccacaaacaccta
gtgccctaccttgcaatgagatatagccatgttgaaagtagtattgaacttcatattgtg
gagaaatatataacaggtgcaagccttcaacaaaaactcacaagtagagacagagttgga
attgacgctgttagaacttattctgagcaacttttatctgcgcttgactgcctacataaa
aagtctgttgtacataagaatcttaaggcgagcagtgttttcttaagcaccaagggatcc
atcaagcttgcagattacagcatagagaaaagagtaatagacttacataatgagtcccgt
attgaacagcctggtgttcgattcagtgaagatcgaattcctgctcgaaatacaaagaaa
ggagatattttgcggttgggtatgttgatactgtcacttgcacaaggacaaacaatacag
gattatcctccagaaataccagcgagctttccactggttttccaaaactttcttgagaaa
tgtcttgtggttgaagacaggcttcgttatacaacatctgaactcttggatcatgaattt
atcaagccaagtgtcaccagtcctatccttgacatcgatcttcctttggagcaaaatccg
agtccgtttgatgaagataagatggatgatgtccttgcaacatccgatgctccaagacca
actctctctcgtctccactcggagtttgagaagttagaatggcttgggaagggagggtat
ggggacgtggtgaaggtaaagaacataatagacggacgagattacgcaatcaaacgtatt
ctactgaacccacatcgatccctgtttaataaaaagataacgagagaagtgaaacttttg
tctcggttaaaccatgagaatgttgtcagatattacaactcgtggattgaaacagttgaa
tgttgggaagatgatgtttcaacaaattcatctaacccaacaacaacaacaacaacaaca
aatgaaacaaaatcaaacgtatcagatcgtatcaattcacttggtttttatgataatatt
gaggttctagcgccacctcctgtcgcatctagcgtgtcagattggagcgtttcattggag
gaggtgagtcgttgtcgtgacgacgaggaagatgatgacgaagatgtgttcaagactatc
tatgttgacgaggatgactccgagagcatcaagtttgatcacagtgatgaagaagaagat
gagatggtggaagaatcaactaatgatggcaaaacgtctcggagtgaagaaaccaccgtc
actagttccgcgtcatcaaaatcgcttgtgactcagcgatttctatacatacagatggaa
tattgtgagaagagcacactgcgtcaaaccattgatgctggcgtttgtaatgaacctgag
agaatgtggagattattcagggaaattcttgaaggattggttcacgtacatgagcaaggc
atgatccatagagatctaaaaccacagaatattttcctcgataaaaacgaccatgttaag
attggtgattttggtcttgctactgcacaagctagagtgacactagctgacagctctgaa
gagatttcaaaatccgaaactggagacagtgtatattctggtgtggtgggaactgcatta
tacgtggcacctgaacttatggttactggtaaaagatcactgtacagtcaaaaggttgac
atctacagtgttggaatcattttctttgaaatgtcatttcctggtatccaaactaagatg
gaacgagtcaaagttcttgggaaccttagaacttcttccataaccttcccatctgacttt
gatgaagctgccatgcctcgtgaagctgagataactcgatggtgtttggatcacgtgcca
aacaaacgaccaactgcatctgaacttctaaagtgtagattagttccaactcctgtacta
gaagaatccaatgtacttgaagcagttcgtgaaatgttaagcaatccagactcaaagccg
tatagattagttatggatgaagttttcaaccaaccagaaaacccaacttcatctgttata
tacgacattgaaatgcataagaaacatttttctgagacacagaatgtcgcacaacagcaa
acatttgacattatatcttccctactacgttgccatggagctgtgcgggtcaatcctccg
ctcttgttacctaaatgtggttcagagaatgatgcaaatgaagctgcagtgctaataggg
gttggcggtaatgtcgtatcactgccttatattctaaggattccactggctcgttttatt
ctgtgtaaaggaatcacaaacattaaaacttacgccattgaaaaagttttccgagcaaga
aaatatgcgaggtcccgacctaaggaattatgggaatgttcgtttgacatcatttccccc
tcagtgggaggtctcgctcccgacgcggaagtgatctctgttgtttccgagatcatctcc
caattcccatctctctcctcccagaagtacgaggttcggatcaaccacttattggcgcta
gagtcaatactaacatactgtggtctcgatgaaagccaccacacggaggcgctcaatgca
ctcgcttcatgcagtggcctctctaaaacacagctccacaactgcatcaacagcttgcct
ctcaatgctcaacaggttgcttcccttcttacattcatccaagtccaaggcccgctgtcc
cgggttcaaacctcgctgcggtcgattacccggaacaagcactcacccgcgtcgtccaga
gcacgacaggcgctccacgaactcgaagctcttcggaaaaatcttgattctttaaacttg
acactacctgttgtgtttgatcttggttattctcataaacaccacaaccattataatggc
atcatatttaaagtttcagcggaaatccaaaagaaaaaaaggacagcaattgatgtgttg
gccatcggtggtcgatatgataaactgctcacaaccatgtctgtattcaacatgtatgac
agagatggggaacagaagttaacacctaagcatgctgtgggtgttagtattgctgtggag
aaaattgtaggatccgtaatggaagaaaacaatcttcccagctcaacaagtatgagtggc
agcaacgaccccactgtgacatcacaattatcccaccacgctgcagttgacgtgttggtt
tgttctgtcgggcgaactcttctgttgcacgaacgattgagggttgtaagatctctatgg
gaggcctcgatagcagcagaaaccgtttatgatcgcggagcaatggaatcaatgcaagaa
gtgcaggagaaagctcaagaaagggggatccgccatcttgtatttttaagcgagaaagaa
agtggctccccgttagtacgatcattgacgcacgacccgctgttacgctctactgaacgc
agagtaccgctggatcagttggtggattatttgttaaaacgattgaaagaagttgaatca
actgtatcaatgaaatcttcctcatcggggttctctgcatcacacgagtcctccactgtt
accatgacgaacaatagtgctcgtcaaatcagcatcgaggttgttcctcccgagaaactt
gcctcacatttaaggaagagatatgagtctgaagttatgaccaaacttacaagtctacct
atgatgtcccacattcaatctaaagctcaaatttgtgcccttgcggttgaactgccatca
ccagttatgaagagcatgggatgtgctcttgatctttctcactctgaggaagagtttaac
tcttctcttgcccatcatctacacactgtatccaagtataaaaaatacttgtcctatatc
gctgagagaatttgcgaggcaaaattcgaacgagaaatgactttcatcattctttacagc
tacaaagaccatggctactgtcttttgatatga
DBGET
integrated database retrieval system
