Ciona intestinalis (yellow sea squirt): 100187419
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Entry
100187419 CDS
T01056
Name
(RefSeq) serine/arginine repetitive matrix protein 2
KO
K13172
serine/arginine repetitive matrix protein 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100187419
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100187419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cwf21
Motif
Other DBs
NCBI-GeneID:
100187419
NCBI-ProteinID:
XP_026690749
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All DBs
Position
7:5829618..5832895
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AA seq
949 aa
AA seq
DB search
MSYNGIGLNTVRGSGTNGYVQRNLSTIRRVKDRSEFKTDEDFKQLDSRMEKKPNAELILH
GLKRRVEVKCMELRDLMEEQGYEEEEIDKKVGTYRKMLSESKETIGGKEDATGRPILTET
HQIAEMKEKENEVLRAAFGIRKDYVKGSAFVGNNPLQKKEEEVENNKMIRSPSESPPPKE
AKKKKKKKVKRKSKKSHKKNSSSDSESESEVEKKKKSRKKKRKKSVSESRSDEDVRRSKK
SKDKSRRDASASRRKEEKSRRKKNSPDVNEEELKIKRNYISGVSPVDPYQRPVKKAPLVK
KKKRAESLERSSSSDGSPPPPKRRSPVRSRDHGEWRRRDGRSGSMSRRRKSVDVGRSDKD
LHPRRRGKRSPRKRDESPKRRDHASPQRQKRSPPLKREESPTRKQDLSSTRQQREDQSSS
RKRGRSSPRKQEETSPQKHEKVKAKIIRQVSSSSSSSSGEDDARSSKKHSKKKVATKKKK
KESSSGSDDSSQDEVKRGEKDGSSSSEEDVEVRRKSPGMKRTSLERYRDSRERNRESHRR
TAESRERNRGSGEKMPESRERNHERNVSRERKSESNEREPESKEKRNLSHNRNNKSRERN
QNRKESRGKRSVSRERNRAPPERKHERKEIKEKRDLSHDRNKSRERKPESKEQRRESHET
KVKPSRDRKRHESPMKKVRHRSSSSSSSSSSSGSDSDAHSSSSSSSSNSSSGSPQRLSKK
QQKSSSPKSQEVRRNKSPLRRSRDERKPQQKMKSPSQSPPPRKRKSPVRKKSSSPPDQRS
KSPIRRKEDSDDSEDSKIPPKMYSSPKRSPEPKRRREESPVRRRRSRSPYRGRRSPGGPG
RRGGYPRRWSPRRRSRSPRRRTRSPRRRFGNPRSEDRRRSRSPRRSPNRRRRSPEDRKVS
PDRKKTSENRRRSSRSLSYSPLRKRPGIAATSDSSSDSSSSSSSSSSED
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtataacggcatcggactaaacactgtccgtggtagtggaacaaatgggtacgtg
cagcgtaatttatcgactatacggcgagttaaagatcggagcgagtttaaaactgacgag
gatttcaaacaactcgattctaggatggagaagaaaccgaacgcagagttgattctccat
gggttgaagaggagagtggaagtgaagtgtatggagttgagagatttgatggaagagcag
ggttacgaggaagaggagatcgataagaaggttgggacgtatcggaagatgctgagcgag
agtaaagagacgatcggggggaaggaggacgcgacagggaggccgatacttaccgagacg
caccagattgccgagatgaaagaaaaggagaatgaggttttgagagccgcgtttgggata
aggaaagattatgtgaaggggagcgcgtttgttggaaataatcctctgcagaagaaagag
gaggaagtggagaataataagatgatcaggtccccgagtgaatccccgcctcccaaggaa
gcaaaaaagaagaagaagaaaaaagtgaaacgaaaatcgaaaaaatctcacaagaaaaat
tcttcatctgacagcgagtctgaaagtgaggtcgaaaaaaagaaaaaatctcgaaagaag
aaacgaaagaaatccgttagtgagagcagatcagatgaagatgttcgaagatcaaagaag
tcaaaagataaatcaaggagggatgcaagcgcttccagaagaaaggaagaaaaatcccga
cgaaagaaaaatagtcctgatgtaaatgaagaggaattgaagatcaaacggaattacatc
agcggtgtttcgcctgttgatccttaccaacggcctgtgaaaaaggccccgttggtaaaa
aagaaaaaacgcgctgaatccttggaaagatcttcgagtagtgatgggagtcctccacct
cccaagaggagatctcctgtgaggagcagggatcatggggagtggagacgaagagatgga
agatcaggttcgatgagtcgaaggaggaagtccgttgatgttgggagatcggataaagat
cttcatcctaggaggcgaggtaaaagatcgccgagaaaacgagatgagtcgccaaagaga
cgagatcatgcgtcgccacagagacagaaacggtcaccaccacttaagcgggaagaatca
ccaacaaggaaacaagatctttcgtcgactcggcaacaacgagaagaccaatcttcgtca
cgaaaacgtggtcgatcgtctccaaggaaacaagaagaaacatcgccacaaaaacatgaa
aaagttaaagcaaaaattatccggcaagtatctagctcttcgtcatcatctagtggcgag
gatgacgcaagatcttcgaagaaacattccaagaaaaaagttgctactaagaagaagaag
aaagagtcttcttccggtagtgatgattcatcccaagatgaagtaaaaagaggtgagaaa
gatggctcatctagttcggaagaagatgttgaggtgcgtcgtaaatcacctgggatgaaa
cgtacatcacttgaaaggtatcgtgattctcgtgaaaggaatcgagaatcacatcgcaga
actgcagaatcacgtgagagaaatcgtggttctggtgagaagatgccagaatcacgtgaa
agaaatcatgaaagaaatgtttcacgtgagagaaagtcggaatcaaatgagagagaacct
gaatccaaagaaaaaagaaatctctcgcataatagaaataataaatcgcgtgagagaaat
caaaacaggaaagagtccagaggaaaaagaagtgtctcacgtgagagaaatcgtgcccca
cctgagagaaaacatgagagaaaagaaattaaagaaaaaagggatctctcacatgatagg
aataagtcacgcgagagaaaaccggaatcaaaagaacaaaggcgagaatcccatgaaaca
aaagttaaaccttcacgtgatcgtaaacgtcatgaatcaccgatgaagaaggtaaggcac
agatcttcttccagttcctcatcatctagttcttctggatcggacagtgatgctcattcc
tcctcatcaagtagctcaagtaactcctccagtggttctcctcaaagattatccaagaag
caacaaaaatcttcatctccaaaatctcaggaggtgaggagaaataaaagtcctttgaga
agatcaagagatgagaggaaacctcaacagaagatgaagtcaccatcgcaaagtcctcca
cctcggaaacgaaaatctcccgtaaggaagaagtcctcaagtcctccggatcaaagaagc
aagtcccctatccggaggaaagaagattcagatgactccgaagattcaaagatccctcca
aagatgtacagctcgccaaaacgaagtccggagccaaaacggaggcgagaagaaagtcct
gtccggcgacgaagatcaagaagtccatatcgaggtcgcaggtcacctggaggaccaggg
aggagaggaggctatcctagaaggtggtcacctcgtcgaagatcaaggtcccctcgtcgg
aggacccgttctcctcgaagaagattcggaaacccgagatccgaggatcggagacgatca
agatcgccacgaagatctcccaacagaagacgaagatcgccagaggatagaaaggtatcc
ccagatcggaagaaaacctccgaaaacaggcgaagatcgtcgcgatcgttaagttactcc
cccctccgtaaacgacccggaatcgccgcaacctccgattcatcatcagattcctcttct
tcctcatcatcctcttcatctgaggattag
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