KEGG   Ciona intestinalis (yellow sea squirt): 101242641
Entry
101242641         CDS       T01056                                 
Name
(RefSeq) SCO-spondin-like
Organism
cin  Ciona intestinalis (yellow sea squirt)
SSDB
Motif
Pfam: VWD C8 TIL VWC Pacifastin_I
Other DBs
NCBI-GeneID: 101242641
NCBI-ProteinID: XP_026695015
LinkDB
Position
Unknown
AA seq 1810 aa
MGYSGDRCELGTGDAEPIVDIISPTSNQDEASCSTWSADHYTTFDGKHFDFPGTSCTYDL
AYDISGFFHVQVVNNFECHGTLCKRAVRIEIGSTDTIMLYPNATATYQGNLLPVPSAVAG
ISLRKAGVYTIAQFGSQVRVLFDNQNSIFIGVPASYKTNMRGLCGNYDHDPNNDLMLESG
KIVTPIEFGNAFHVSDNCLKVSLDQSLPCSKFNDTTQMELEKICSSLSNQQFSECHGVVN
PGNFLEICKTDVCKVGPEAAAEKACEIFTHYSRTCSNYHLDLKWRSSELCNIECPNNKVY
MECGSPCEQTCDNVGFQHSCDIDICVDGCFCPTGTYYERETGMCLTKAECPCKRGGVPYQ
PGESVQHDCNTCVCGNGRWNCTTNACPAECQVLGEDQYKTFDGTIYGFSGGCEYVLAKAE
NTYLGDFTILIQNSGCGFADTTACQKTLTVNLMKGEVITILGHGRVKIGETVVSLPYSNT
YVGYTIRKITTISLQLVIYNEIRLTWDVDNGIYIEVPPAYRESIRGLCGTYNLKKYDDLM
LPSGMITQSRTEFGNGWKTTPHCNVDEPSVGMDMDIDACDLGFNYHSQATQLCSVLKTNP
FSLCNLVVDPIPYIEGCKHHVCHCLHKFVSSDSCECGMLSAYARACGRAGTPVPSVPSWR
DTYGCPANCEGGRVFMECTGRSCETTCQMFSEGSIDKKCPKIKECHPGCVCPEGQYLDTR
RNTCVKVAECPCYFNEVAYEPMSSRQEVCDMCNCNNGAWSCAPIPDCTLENVCQEGQAWS
NCTKCERTCENMHTACVPNHCHSGCACLAGTVKEHGSCIPPGDCPCHHHGVSYPEGSSIN
QDCNKCTCHQTKWVCSRQDCSSTCTVYGEPHVLSFDKRRFKFFGSCSYVLAEDICEDGVG
SFSIVMENIHCETGNVVCAKSLRISIHDKVIELVRGSEPKVMRNTWALPGTPKADFLIQK
SGLFIIISTKIGLKIRWDHGTELSIQLDPQFQGKVCGLCGNYDGNVHNDFKTRQGEITDL
AHLFGDSWKVFDSCPSSEPTQAHPCQIYPERAAWSRYKCRAILNEPFTKCHSVVSPQEYF
LDCVFDSCKCHAGGDCECLCTAIAAYARACSDRQVYIKWRTQETCGLQCEEGLHYSPNGT
TCNNGCPSSNCDSMLVEGCHCPEGLVYLDGKCVSSVPCPCNYNGTVIQSGNSYVDECKNC
TCHNGSISCDQTSCTTAVTSTTSSFTTSVATPPFVTTPFSSVETTRGLNFSETSTAVITY
TPPADETVSTTPQSSTTFETTTAKVTTSRGSTSISSGTSPGGSTTVSFGTSAVGSTAVSS
GTSAVGSTTVSSGTSTGGTSTVSSGTSPGESSTVSSGTSPVESTTVSSGTSAVGSTTVSS
GTSTEGSTTVSSGTSPVGSSTVSSGTSTVGSTTVSSGTSAVGSTTVSSGTSAVGSTTVSS
GTSTGGTSTVSSGTSPGESSTVSSGTSPGGSSTVSSGTPTGGTSTGGTSTHYCILWYINW
RNLYCIIWYISCRNLYCIIWYTNWWNLYWRNLYCIPWYITWRKHTTESSGTPPGGTSTVS
SGTSPVGSTTVSSGTSAVGSTTVSSGTSAVGSTTVSSGTSAVGTSTVSSGTLTVTETVTN
ATVIPPSSTVVTITTFSPPPTPPTTSCLHNGTDYTLLGNTTWEEGGCRNCMCVDGEAQCG
KVCHVTCGENEELLDDADSDECCRCAPKQQEEEQEEEEDKCKPVNIEIQLNVSGCVSPPV
NLTSCSGQCVSGVEVISEPPFLSQKCNCCQPKSVVSKSVTLICPGGKEREQLVPFIQSCS
CLACGGEPIF
NT seq 5433 nt   +upstreamnt  +downstreamnt
atggggtattctggggacaggtgtgaacttggaactggtgatgcggaaccaattgtggat
attatttccccaacttcaaatcaagatgaggcttcctgttcaacttggagcgctgaccac
tatactacatttgatggaaagcattttgacttccctggaactagttgcacttatgatctt
gcttacgacatttccggtttcttccatgtccaggttgtgaataactttgaatgccatgga
acgctttgcaaaagagctgttcggattgagattgggtcaactgataccatcatgctttat
cccaacgccacggctacataccaaggaaatttacttcccgtgccaagcgcagtggctggt
atctcccttagaaaagctggtgtatacacaattgcacaatttggatcccaagttcgagtt
ttatttgacaatcaaaactccatctttattggggtgcctgcttcgtacaaaacaaacatg
cgaggattatgcggtaattatgaccacgatcccaataacgatctaatgttggaaagtggg
aagattgtgacacctatcgagtttggaaatgcatttcacgtcagtgacaattgtttaaaa
gtttcacttgatcaatcattgccatgttcgaaattcaatgataccacccagatggagttg
gaaaagatatgcagttccttgagcaatcagcaattttccgaatgtcatggtgttgtgaac
ccagggaacttcctagaaatttgcaaaactgatgtttgtaaagttggaccagaagccgct
gctgaaaaggcatgcgagatattcactcactattctcgtacttgttcaaattaccatcta
gatcttaaatggagatcttcagaattatgcaacatcgaatgtcctaacaataaggtttac
atggaatgtgggtctccttgtgaacagacgtgtgataatgtagggttccagcattcatgt
gatattgatatctgcgtggacggttgcttttgcccaactggtacatactatgaacgagag
acaggaatgtgcttaactaaagctgaatgcccttgcaagagaggtggagttccatatcag
cctggagaaagtgtccaacatgattgcaacacatgtgtatgtggcaacgggagatggaac
tgcacaactaatgcatgccccgctgaatgccaagtgcttggagaagaccagtacaaaaca
tttgatgggacaatatacgggttctcaggaggctgcgaatatgttcttgcaaaagctgaa
aatacctacttgggtgattttacgattttgattcagaactcaggctgtgggtttgcggac
acaacggcttgtcaaaagaccctcacggttaaccttatgaaaggagaagttataacaata
cttgggcatggacgagtaaaaattggagaaacagtagtgtctctgccatacagcaacact
tatgtgggctacactataagaaaaattacgactatctctctccaacttgttatatacaat
gagatccgtttgacttgggatgttgacaacgggatttatattgaagttccaccagcttat
cgagagtctattagggggttatgtggtacttacaacttgaaaaaatatgatgatctgatg
ctaccttcggggatgataacacaaagcagaacagagttcggtaatggctggaagacgacc
ccacattgtaacgttgatgagccttcagtaggcatggatatggatattgatgcgtgtgat
ttaggatttaattaccacagccaggcaacacaactgtgtagcgtcttgaaaacaaacccg
ttttccttgtgtaatttggttgtggatcctattccttacatagaagggtgtaaacatcat
gtctgtcactgcctgcacaagtttgtaagctctgactcttgcgaatgtggtatgctgagt
gcatatgctcgtgcgtgcggtcgagctggtacaccagtgccatctgtgccatcatggaga
gacacatatggttgtccagcgaactgcgaaggaggccgagtatttatggaatgcacggga
agatcttgtgaaaccacttgtcaaatgttcagtgaaggctccattgacaaaaaatgcccc
aagattaaagagtgtcaccctggttgtgtttgcccagaaggccaataccttgatactcgc
cgcaatacttgtgtcaaagtagctgaatgtccttgttattttaatgaagtggcatacgag
ccaatgtcatctcgccaagaagtttgtgatatgtgtaattgcaacaatggtgcatggtca
tgcgctcctataccagactgtacgttggagaatgtctgccaagagggccaagcatggagt
aattgtaccaagtgtgaaaggacgtgtgaaaacatgcacactgcttgtgtgccaaatcac
tgtcattctggatgcgcatgtctggctggaactgtaaaagaacatggttcgtgtattcct
ccaggagattgcccatgccatcaccatggtgtcagttacccagaaggttcctccatcaac
caagactgcaataaatgcacctgtcaccagacaaagtgggtttgttcaaggcaggattgt
tcatctacttgcacagtgtacggtgaacctcatgtcctcagtttcgacaaacgtagattc
aagttttttggttcttgtagttacgtgttggctgaggacatatgcgaagacggtgtggga
tcctttagcatagtgatggagaatattcattgtgaaactggaaatgtggtttgtgctaag
tcattacggatttcaattcatgataaagtgattgaattggttcgtggatctgaacccaaa
gtaatgagaaacacgtgggctttgcctggaaccccaaaggctgattttttaattcagaaa
tcaggactctttataattatttcaacaaagattgggctcaaaataagatgggaccatggt
acagagttatctatacaactagatccgcagttccagggaaaagtttgtggtttatgcgga
aactatgatgggaacgttcacaatgactttaaaactagacaaggtgagattaccgacctt
gcccatttgttcggagatagttggaaagtgtttgatagctgcccctcctctgagccaaca
caggcccatccatgccagatttatcctgaaagagcagcatggtccagatacaaatgtaga
gccattctaaatgagccattcaccaagtgtcattcagtcgtatccccacaggaatacttt
ttggattgtgtcttcgactcttgcaaatgtcacgccgggggtgattgcgagtgtctgtgt
acagccatagcagcatacgcaagagcctgcagtgaccgacaagtttatatcaagtggaga
actcaagagacctgtggtttacaatgtgaagaaggactacactacagtccaaatggtaca
acatgcaacaatggatgcccgagttcaaactgtgattccatgttagtggaaggttgccat
tgtccagagggtttagtttatttagatggtaaatgtgtttcttctgttccctgcccatgc
aactacaatggcactgtcatccaatcaggaaatagttatgtggatgaatgcaagaattgt
acttgccataacggatcaataagttgcgaccaaacatcgtgcacgacagctgtcacctca
actacttcatcatttacgacttcagttgccacgccaccatttgttacaacccccttcagc
tctgttgaaactacaagaggtttaaacttttcagagacttcaactgcggtaataacctac
acaccaccagctgatgaaacagtatctaccacaccacaatcttcaaccacatttgaaaca
acaacagccaaagttacaacttctcgaggaagcacctctatatcatctggtacatcacct
gggggaagcactactgtatcatttggtacatcagctgtagggagcactgctgtatcatct
ggtacatcagctgtaggaagcactactgtatcatctggtacatcaactgggggaacctct
actgtatcatctggtacatcacctggagaaagctctactgtatcatctggtacatcacct
gtagaaagcactactgtatcatctggtacatcagctgtaggaagcactactgtatcatct
ggtacatcaactgaaggaagcactactgtatcatctggtacatcacctgtaggaagctct
actgtatcatctggtacatcaactgtaggaagcactactgtatcatctggtacatcagct
gtagggagcactactgtatcatctggtacatcagctgtaggaagcactactgtatcatct
ggtacatcaactgggggaacctctactgtatcatctggtacatcacctggagaaagctct
actgtatcatctggtacatcacctggaggaagctctactgtatcatctggtacaccaact
ggtggaacctctactggaggaacctctactcactactgtatcttatggtacatcaactgg
aggaacctctactgtatcatctggtacatcagctgtaggaacctctactgtatcatctgg
tacaccaactggtggaacctctactggaggaacctctactgtatcccctggtacatcacc
tggaggaagcacactactgaatcatctggtacaccacctgggggaacctctactgtatca
tctggtacatcacctgtaggaagcactactgtatcatctggtacatcagctgtaggaagc
actactgtatcatccggtacatcagctgtaggaagcactactgtatcatccggtacatca
gctgtaggaacctctactgtatcatctggtacattaactgtaacagaaaccgtgacgaat
gccacagtcatcccaccttcgagcacagttgtgaccataacaacattttctccacccccc
acaccacccaccacaagttgtttgcataatggcactgactatacccttcttggaaacacg
acttgggaagaaggaggatgtagaaattgcatgtgtgttgatggtgaagctcagtgtggc
aaagtttgtcatgtgacctgtggcgaaaatgaagaacttctggatgatgcagattctgat
gaatgctgtcggtgcgctcccaaacaacaagaagaagaacaagaagaagaagaagataaa
tgcaaaccagtaaacattgaaattcaacttaatgttagtggttgtgtgagccctccagtc
aacctcacatcatgcagcgggcagtgtgtatccggtgtagaagttatatcagagccgcca
tttttatcgcaaaagtgtaactgttgtcaacccaaatcagttgtgagcaagtctgttaca
cttatatgccctggtggtaaagaaagagaacaacttgtcccgttcattcagtcttgttca
tgcttggcttgtggaggcgaacccatattttaa

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