Ciona intestinalis (yellow sea squirt): 104265386
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Entry
104265386 CDS
T01056
Name
(RefSeq) tumor susceptibility gene 101 protein-like isoform X1
KO
K12183
ESCRT-I complex subunit TSG101
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03250
Viral life cycle - HIV-1
cin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104265386
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104265386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
104265386
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
104265386
Membrane trafficking [BR:
cin04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
104265386
Exosome [BR:
cin04147
]
Exosomal proteins
Proteins found in most exosomes
104265386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
DUF5406
Motif
Other DBs
NCBI-GeneID:
104265386
NCBI-ProteinID:
XP_002127340
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MSRMSQQQYSAYLKSQMQGKYTQLDLAKKDALSLMHHYKDLQPKMDRFIYNDGSTKNLMS
LCGTIPVNYKGTTYNIPIAIWLQESHPQLPPLCFVKPTSNMQVKQGKHVDANGRVYLPYL
NEWTPHRHTLIGLTQVLVAMFGEEPPVFAKPSGPPQRPPQPYPAQNRTPYPTPGYTAQGP
PTTNYQPNVMSPYPPAMPSQQPTPYPATNTPGYPGYPPQPGYPPVNTSPYPPQPHQPVVQ
PMQQKDQSLDENMIKASLRSAANDRLKLRLKETLSQAEAENSQLKQVGSELKGGQERLQT
IIKKLQLEIDEADANIIMLEQKNEEAKQEIELTEKKQDDLDVDDIVMATTPVYRQIVTSF
AEEQALEDTIYYLGEALRKDVLDVDTFLKHVRSLSRQQFMLRAVIQKARKSAGLANIY
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaatgtcccagcaacaatacagtgcgtacctcaagtcacagatgcaaggcaag
tacacacagctggatttggccaaaaaagatgctttgagtttgatgcaccattataaagat
ttgcagccgaaaatggaccggtttatctacaatgacggctccacgaaaaacctcatgagt
ttatgtggtacaatacctgtcaattacaaaggcacaacatataatattcccatagcaata
tggctccaagaatcccacccccaactaccaccactgtgttttgttaaaccaacaagtaac
atgcaggtgaaacaaggtaaacacgtagatgcaaacggtcgtgtgtatttgccctattta
aacgaatggacaccgcaccgccacacccttattggtctcacccaagtcttggttgctatg
tttggtgaagagccgccagtatttgctaaaccaagtgggccaccacaaagacccccgcaa
ccataccctgcacaaaaccgaaccccttacccaacccccgggtacacggctcaaggccct
cccactacaaactaccaaccaaatgtaatgtccccgtacccccctgcaatgccatcacaa
caacccacaccttaccctgccaccaacaccccaggataccccggctaccccccgcagcca
ggctacccacctgtcaatacctctccttaccccccacaaccccaccagcccgtagtacaa
cctatgcagcagaaagatcaaagcttagacgagaacatgataaaggcgtcgctacgatct
gcggcaaacgaccggctaaaactaagactaaaagaaactctctcgcaagctgaagccgaa
aactcacagcttaaacaagtgggttctgaactgaaaggaggccaagagaggcttcaaacg
attatcaagaagctacagcttgaaatagatgaagcggacgccaatattataatgttggag
cagaaaaacgaagaagcaaagcaagaaatcgaactaactgagaaaaaacaagacgatctt
gatgtggatgacatagtgatggcaacgacaccggtatatcgacagattgtgacttcattc
gctgaggagcaagcacttgaagacacaatatactatctaggggaagcactacgtaaggac
gtgcttgatgtcgatacatttctcaaacacgtacgttcgttgtcgcgccaacagtttatg
ttgcgcgctgttatccaaaaagctcgtaaatcggcgggacttgcaaatatatattag
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integrated database retrieval system
