Ciona intestinalis (yellow sea squirt): 104266244
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Entry
104266244 CDS
T01056
Name
(RefSeq) vacuolar protein sorting-associated protein VTA1 homolog
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104266244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
104266244
Membrane trafficking [BR:
cin04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
104266244
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vta1
Vta1_C
Motif
Other DBs
NCBI-GeneID:
104266244
NCBI-ProteinID:
XP_009860276
UniProt:
H2XQF1
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Position
11:complement(4275289..4276596)
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AA seq
291 aa
AA seq
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MKMEVKPLPPVPDKLKIVRPYINAAKELKSEAPVASYYCNIYALERAMKPDVKKDPDAKG
FLLNLMDYAEAHKQALLNHPDFAEDIQGGDSSGYEVVYGAAMELFVSADKQDRDSNFNKH
LVRTFYTSAILFDVLQTFKEELPDKVVSLRKYARWKATYIHRCLKNNEAPIPGPIGDEEG
PLTDESYSKDNQAQPGPSYSAPGPSSSTYADPGPSSYTEQPKPSPRVQPQPEPQPQYEEE
ASSSGAGLSPDLMQQAEKLCKHAGSALQYEDVPGAINLLEKCLKLLRTGKE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggaagttaagccactcccaccagtgcccgacaaactgaaaattgttcgtcca
tacattaatgctgcaaaagagctaaaaagtgaagcacccgttgcatcctattactgcaat
atctatgctcttgaaagagccatgaaacctgatgttaaaaaagacccagatgcaaaaggc
ttcttgctaaatttgatggattatgcagaggcgcataagcaggcattgctgaatcatccg
gattttgctgaagatattcaaggtggtgatagttccgggtatgaagttgtctacggagca
gccatggagttatttgtctccgctgataaacaagacagagatagtaactttaacaagcat
ttggtacgaactttctacacaagcgcaatcctttttgatgttcttcagacattcaaagaa
gagctgccagataaagtagtttccctgagaaaatatgctcgatggaaggccacgtacata
cacagatgcttgaaaaacaatgaagctcccataccaggacctattggtgatgaagagggt
ccattaactgatgagagctattctaaagacaaccaagcccaacctggaccctcctacagc
gccccaggaccatcatcatccacttacgctgatcccggaccatcaagctacactgagcaa
cctaaaccaagtccgagagtccagccacagcctgaaccacaaccccaatatgaagaggaa
gcaagcagcagtggtgctggtctctcccctgacttgatgcagcaagctgaaaaactttgc
aaacacgcaggcagtgcgctgcagtatgaggacgtacccggtgcgatcaatctgcttgaa
aaatgcctaaaacttctacgtactggaaaagagtga
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