Ciona intestinalis (yellow sea squirt): 778843
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Entry
778843 CDS
T01056
Symbol
zf(fyve)-11
Name
(RefSeq) zinc finger protein
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03250
Viral life cycle - HIV-1
cin04144
Endocytosis
cin04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
778843 (zf(fyve)-11)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
778843 (zf(fyve)-11)
04145 Phagosome
778843 (zf(fyve)-11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
778843 (zf(fyve)-11)
Membrane trafficking [BR:
cin04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
778843 (zf(fyve)-11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hrs_helical
VHS
FYVE
FYVE_2
UIM
Motif
Other DBs
NCBI-GeneID:
778843
NCBI-ProteinID:
NP_001071892
Ensembl:
ENSCING00000006524
UniProt:
Q1RQ15
LinkDB
All DBs
AA seq
714 aa
AA seq
DB search
MFRSKSNFEKVFEKATSNLLLEPDLDSMLQLCDMIRGGDVKVREAAALIKMRVIEEPNPH
VQLFAIHVMDTVMKNCGDEIHKCIITESYLEKLKDLVKTTKAETIKTKLLDMIQAWGVGF
KQSKDYKISADLYNIMKAEGYKFPPMTDTADMFKSEKAPTWSDGDECMRCKAEFGVIQRK
HHCRACGGVFCSKCTSKQAIIPKFGIEKEVRVCDSCYDSLTKKSKSGSADDELPAEYLNS
SLAKQSQEPPPRDEAALKEEEELQLALALSMDEQTNRDRIRSEQINNSVYGSVVKPSTPP
AQPHVVDAEVDPDLARYLNRSAWEKKKSEQDKQKRNNKSNEKVTTTTTTTNHKVIEDTDV
VVVSEESKVEVQKQEESLQNGGVNDNEEFLNNLRTSVEIFTNRMRSNKMRGRSIANDSAV
QGLFQSINNMHPLLMKTMNELEEKRLQQEALQDKLVQLRDARAALDALRADHARKVRQAA
EEAERQRQIQMAHKLELMRQKKQEYLAYQRQMALQRMEEQEAARHARLEQHKQFIQQRAM
QPSMLVAGYNTQQLPQQPEAVPEFNQGGGGYMYSNYPQHTNQQHYQQNMSQPYVAQQLPN
NYQHQQMPYQQNQAYDQQTYQQVDSNHGNQQLDTYNMTTMAGTLPNPNMAGGIPQQQVIA
TAPPQTPQPTNQQMTYSLPHDQQQFYQQQQPQQQQQQPQDVGNERNQNLLISFD
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgttcaaaatctaactttgaaaaagtcttcgagaaagctacaagcaaccttcta
ttagaacctgacctggacagtatgcttcaattatgtgatatgattagaggaggcgatgtt
aaagttagagaagccgcagcattgattaagatgagagtgattgaagaaccaaaccctcat
gttcaactcttcgctattcatgtaatggacacagtgatgaagaattgtggagatgaaatt
cataaatgcatcattactgagagttatttggaaaagttgaaagatcttgttaagacaaca
aaagctgaaacaataaagacaaagttactggacatgatacaagcatggggtgttggcttc
aaacaaagcaaggattacaaaatatcagctgatctttacaatattatgaaagctgaaggt
tacaagtttccaccaatgacagacacggctgatatgtttaaatcagaaaaggcaccaacc
tggagtgacggagatgaatgtatgaggtgtaaagctgagtttggtgtgattcaacgcaag
catcactgtcgagcatgcgggggtgtcttctgcagcaaatgtacgagcaaacaagcaatt
attcccaagtttggaatcgagaaggaagttcgtgtgtgtgatagttgttatgatagcttg
accaagaaaagtaaatctggttcagcagatgatgaattaccagctgaatatcttaacagt
tcgctggctaaacaaagtcaggagcctccacctcgagatgaagctgcattgaaggaagag
gaagaattacaactcgctctcgcgttatccatggatgaacaaaccaacagggatcgaatc
aggagcgaacagatcaacaacagtgtgtatgggagtgttgttaaaccttcaacaccacct
gcccaaccccatgttgtggatgcagaagtggatcctgatcttgctcgttacctcaatcga
tcagcgtgggagaagaagaagagtgaacaggataaacagaaacggaacaacaaaagcaat
gagaaggttaccaccaccactactactaccaaccataaggtgatagaagatactgatgtt
gttgttgttagtgaagaaagtaaagtggaagttcaaaaacaagaagagagtttacagaat
ggaggggtgaatgataacgaggaatttctcaacaatcttcgaacaagtgttgagatattc
accaatcgaatgcgatcgaataaaatgcgaggacgatcgatagcgaatgattcagctgta
caaggattgtttcaaagcatcaacaacatgcatccattgctaatgaagacaatgaatgaa
ttggaagaaaaaagattgcaacaagaagcattacaagataagttggttcaattacgcgat
gcacgagctgcgttggatgccttgcgggccgaccacgcacgtaaagtcagacaagctgca
gaggaagctgagagacaacgccagatacaaatggctcacaaacttgaacttatgagacag
aagaaacaggaatacctcgcataccaaaggcagatggcattacaaagaatggaagaacaa
gaagcagcacgccatgctaggttggaacaacataaacaattcattcaacagcgagccatg
caaccatctatgttagtggccgggtataatacacagcaactaccacaacaacctgaagct
gtaccagaattcaaccaaggtggaggtggttacatgtattctaattatccacaacataca
aaccaacaacattatcaacaaaacatgagtcagccatacgttgcacaacaactaccaaac
aactatcaacatcaacaaatgccgtatcaacaaaatcaagcttatgatcaacaaacttat
caacaggtggatagtaaccatggcaaccaacaattagacacatacaacatgacaacaatg
gctggcactttacctaaccctaacatggcaggtggaataccacaacaacaggtgatcgca
acagctccaccacaaacaccacaaccaacaaatcaacagatgacttattcgttaccgcac
gatcaacaacagttctatcaacaacaacaaccacaacagcaacaacaacaaccacaggat
gtaggaaacgagcgtaaccaaaatttgttgatatcgtttgactaa
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integrated database retrieval system
