Clostridium intestinale: HZF06_19385
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Entry
HZF06_19385 CDS
T08934
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cint
Clostridium intestinale
Pathway
cint03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cint00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HZF06_19385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cint03400
]
HZF06_19385
Enzymes [BR:
cint01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HZF06_19385
DNA repair and recombination proteins [BR:
cint03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HZF06_19385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
Helicase_RecD
PIF1
PhoH
AAA_22
DEAD
SLFN-g3_helicase
T2SSE
AAA
nSTAND3
ATPase_2
UvrD-helicase
DNA_pol_lambd_f
TrwB_AAD_bind
HHH_2
NTPase_1
SRP54
MeaB
ABC_tran
UvrD_C
HerA_C
HHH_3
AAA_5
AAA_28
AAA_16
AAA_29
Zot
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QLY79216
UniProt:
A0A7D6VNL7
LinkDB
All DBs
Position
complement(3890729..3892957)
Genome browser
AA seq
742 aa
AA seq
DB search
MEEISGIIESIVFHNEENGYMVAKLSNGEKSFTAVGVVPFIKEGIHLKIKGEWVLHPSFG
RQIKIEECEEIIPNTLEGIEKYLSSGVIYGIGPITAKKIIDKFKENTLDILDKDINKLRE
IEGIGEKKFLLIKESYEEQKELKNIIIFFQTHGVTTNQCIKIYKRFGTDSINIVKENPYI
LCEEITGIGFKTADKIARSIGIEKDSPYRIESGIKYVINQFCANGNTYMPVEILIKEGIE
VLTVSKQVIEENLYNACREQKLILEKVNEDNGVFTLPYYYCEIGITKRILTLSVANFQKF
NTDIEYEISMFENKNDIKFAASQKKAILGAFNNGIEIITGGPGTGKTTIIKCIINIFEKS
GNRVILAAPTGRAAKRMSESTGKEAKTIHRLLEMGVTDSEEKSIFGKDEGSPLEADVVII
DEASMIDVMLMNSLLKAIRVGTRVILVGDVDQLPSVGPGNVLKDLIESGFTEVIRLKEIF
RQGKESLIVVNAHKINEGTMPILNERDKDFFFIKEDNLDYIMTTLIDLINNRLPKFNASW
DKMKHLQILTPMKKGNLGVTNLNYRLQEILNPPSDNKREKKIRDNIFRVGDKVMQTKNNY
TLKWKRIAGYGEPEGVGVFNGDMGFIESINEEEKIFTIIFDDERKVIYDFIYLDELDLAY
AITIHKSQGSEFPVIITPAYMGSPMLMNRNLLYTGITRAKQLVVVVGSIKALKFMIENTR
STERYSSLKFRIKDIISSDAFN
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaataagtggaataatagaaagtatagtatttcataatgaagaaaatggatat
atggttgcaaaactttctaatggagaaaagtcatttacagctgttggagtagttcctttt
ataaaagaaggcatacacttaaagataaaaggtgaatgggtattgcatcctagctttggg
agacaaattaaaatagaagagtgtgaagagattataccaaatacactagaaggaatagag
aagtatctatcttctggagttatatatgggattggacctattactgctaaaaaaattata
gataagtttaaagagaacactttagatatattagacaaagatattaataagttaagagaa
attgaaggcattggagaaaaaaaatttttacttataaaggaatcctatgaggaacaaaaa
gagctaaaaaacataataatattttttcaaactcatggagtaacaactaaccaatgtata
aaaatatataaaagatttggaacagattcaataaatattgtaaaagaaaatccatatatt
ttatgtgaggaaattacaggaataggatttaaaactgcagataaaattgctagaagtata
ggtatagaaaaggattccccttataggattgaaagtggaataaaatatgtaataaatcaa
ttttgtgcaaatggaaatacatatatgccagttgagattcttataaaagagggcattgag
gttttaactgtatcaaaacaagttatagaagaaaatttatataatgcatgtagagaacaa
aaattgattttggagaaggttaatgaggataatggtgtttttacactaccttattattat
tgtgaaataggaataacaaagaggatattaactttatcagtagcaaattttcaaaaattt
aatactgatatagagtatgaaatatctatgtttgaaaataaaaatgatataaagtttgca
gcatcacaaaaaaaagccatcttaggagcttttaataatggtatagaaataattactgga
ggaccaggaacaggaaaaacaacaatcattaaatgtataataaatatatttgagaaatca
ggaaatagagttattttagcagcacctacaggaagagcagctaagaggatgagtgaatct
acaggaaaagaagcaaaaactattcatagattattagaaatgggagttactgatagtgag
gaaaaaagtatattcggaaaagatgaaggaagtccattagaagctgatgtagtaataata
gatgaggcttctatgatagatgttatgcttatgaactcattactaaaagctattagagta
ggaactagagtaatattagttggagatgtagaccagctcccatcagtaggacctggaaat
gtattaaaagatttaatagaaagtggttttacggaagtaataagattaaaagaaatattt
agacaaggaaaagaaagccttatagtcgtaaatgctcataagataaatgaaggaactatg
cctattttaaatgagcgagataaggacttttttttcataaaagaggataacctagattat
ataatgacaacacttatagacttaattaataacaggcttccaaagtttaatgcgagttgg
gataagatgaaacatcttcaaatactaacacctatgaaaaaagggaatttaggagtaact
aatttaaattatagactgcaagaaattttaaatccacctagtgacaataaaagagaaaag
aaaataagagacaatatatttagagtaggggataaagttatgcaaactaaaaataactat
actctaaaatggaaaaggatagctggatatggagaaccagaaggcgtaggagtatttaac
ggagatatgggatttatagagtctataaatgaagaagagaagatctttactattattttc
gatgatgaaagaaaggtaatttatgattttatttatttagatgaattggatttagcttat
gctattacaatacataaaagtcagggaagtgaattccctgtaataattactccagcatat
atgggatctcctatgcttatgaacagaaatttattgtatacgggtattactagagcaaag
caattagtagtagtagtaggttctattaaagcattaaaatttatgatagaaaatacaaga
tctacagaaagatattcgtcattaaaattcagaattaaggatataatttcaagtgatgcg
tttaattag
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