KEGG   Cellulomonas iranensis: LFM56_10600
Entry
LFM56_10600       CDS       T07886                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cira  Cellulomonas iranensis
Brite
KEGG Orthology (KO) [BR:cira00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cira03400]
    LFM56_10600
Enzymes [BR:cira01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LFM56_10600
    5.6.2.6  RNA 3'-5' helicase
     LFM56_10600
DNA repair and recombination proteins [BR:cira03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LFM56_10600
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C DUF6406 ResIII AAA_25
Other DBs
NCBI-ProteinID: UCN13370
LinkDB
Position
2349628..2354709
AA seq 1693 aa
MVLDRFSEPTRAWFTGAFAAPTAAQAGAWEAVSGGDHALVVAPTGSGKTLAAFLWALDGL
LTGEPPAEPGARCRVVYVSPLKALATDVERNLRSPLVGIRQAATRLGRTLPDVTVGIRTG
DTPPNERRAFATSPPDVLITTPESLYLVLTSGARAGLAGVRTVIVDEIHAVAGTKRGAHL
AVSLERLDALLEREGGPGPVQRVGLSATVRPVDAVAAFLGGARPRDEGGREVVVVQPPSQ
KVIEVDVVVPVPDLGDLASAARPGAAGTAPGSMNRYGGPGIDPDLAGFGAPAPGAAPVAV
DDGPPRASIWPHVEERVVDLVAAHRSTLVFTNSRRGAERLTARINEVWAERHGADVPDPG
AAQPAAAPGQSGTSAGVDTRDAATIVARAHHGSMSRAERTRTESELKAGRLPAVVATSSL
ELGIDMGALDLVVQVGAPPSVASGLQRVGRAGHQVGAVSRGVVFPTYRGELVPAAVTAQR
MRTGELEALAVPANPLDVLAQQVVAMVAVDDWPLDDLARVVRRAAPFATLGEATLRAVLD
MLAGRYPSEDFAELRPRIVWDRVADVLSGRPGALRLAVTSGGTIPDRGLFGVFLAGGGET
SDVPADAERSGGRVRGGKRVGELDEEMVYESRVGDTFTLGSSTWRIEDITPDRVLVTPAP
GIPGRLPFWKGDAPGRPAELGRAVGGWVREVAALGDDAARERVEAAGLDAWAADNLLAYL
REQQEATGQVPSDTVVVVERFRDELGDWRVVLHSPYGARVHAPWALVLAARLRERYGVDA
AAMHADDGIVLRLPDVLDGAADGAWDADGGTDSGPRLTLDDLLLDPDEVLASVRDELGAS
AMFAARFREAAGRALLLPRRRPDRRQPLWQQRQRAAQLLEVAARYPDFPILLEAVRECLQ
DDFDTDALIELMRDVGSGRVRVVEVTTTHPSPFAQSLLFGYTAQFLYEGDAPLAERRAAA
LTLDPTLLAELLGSGGESQLADLLDPEAVERTEAELAGTAPDRQAGTLEQVADVLRRHGP
LPVADVQARTRADVRDLVPDWLDELAAARRAIRVRLGGVAPERAEQWAAVEDAGRLRDAL
GVALPVGVPEVFTEVLPDPLADLLRRHARTHGPFPAAQAAARFGLGVAVVGEVLRRLEAS
GVLVQGRLRPDVLGGTGDEFCDADVLRRLRQRSLAALRSQVEPVDPRALGVFLPRWQGVH
AVGRRPSGLRGVDAVARAVEQLAGFAVPASALETHVLPARVPDYSPAMLDELTSAGEVLW
AGHSPLAGHDGMVSLHPVAVADLTLAPVPDLDASDAPASGPVHRAVLAALEGGGAWFLGP
LVERVAAVRLDDDPAPGTTAVLEALWDLVWAGRVTNDGLGPLRAWLAGGPTAHRTQAAPA
RGRPLRPRLGLRAGVRLGVPTARDDGGRVGGSTSGAGAGRWSLLPAREPDPTVRAHALAA
QLLDRHGVLTRAVAPAEGVSGRFGDVYRVLSALEQSGQVRRGYFVERLGGSQFALPGAVD
RLRADAEVVDRARERAADRLDTAPLGPGLPWQDVPPPAWGAPAGPGAWSPGVPDADRRAG
DQPWVVVLAATDPANPYGAALAWPDAPAGRDGTRHRPGRKAGALVVLVDGGLALYLERGG
RTLLTFSDDPVTLGAAADALVHAVRERRAGRLTVGRIDGAEVLSADVLATPAATALTGAG
FVTTPRGLRLHAS
NT seq 5082 nt   +upstreamnt  +downstreamnt
gtggtgctcgaccgattctcggagccgacccgtgcgtggttcacgggcgcgttcgccgcg
cccacggccgcgcaggcgggagcgtgggaggcggtgtcgggcggcgaccacgcgctggtc
gtggcccccaccgggtcgggcaagaccctcgcggcgttcctgtgggcgctcgacggcctg
ctgacgggcgagccgcccgccgagcccggtgcgcggtgccgcgtcgtgtacgtctcgccg
ctcaaggcgctcgcgaccgacgtcgagcgcaacctgcgctcgccgctcgtggggatccgg
caggcggcgacccggctggggcgcacgctgcccgacgtcacggtcggcatccgcaccggc
gacacgccgccgaacgagcggcgcgcgttcgccacgtcaccccccgacgtgctcatcacg
acccccgagtcgctgtacctcgtgctcacgtcgggcgcgcgggcggggctcgcgggcgtg
cgcaccgtgatcgtcgacgagatccacgcggtcgcgggcaccaagcgcggcgcgcacctg
gccgtgagcctcgaacggctcgacgcgctgctcgagcgcgagggcggcccgggtcccgtg
cagcgcgtcgggctgtcggccaccgtgcgaccggtcgacgcggtcgcggcgttcctcggc
ggcgcgcgaccgcgcgacgagggcggtcgcgaggtcgtcgtcgtgcagccgccgtcgcag
aaggtcatcgaggtcgacgtcgtcgtgcccgtgcccgacctgggcgacctcgcgtccgcc
gcacgtcccggcgccgcgggcaccgccccggggtcgatgaaccgctacggcggcccgggg
atcgaccccgacctcgcggggttcggcgcgcccgcaccgggggccgcgcccgtggcggtc
gacgacgggccgccacgcgcgtcgatctggccccacgtcgaggagcgcgtcgtcgacctc
gtcgcggcgcaccgctcgaccctcgtgttcaccaactcgcggcgcggcgccgagcggctc
accgcgcgcatcaacgaggtctgggcggagcgccacggcgcggacgtgcccgaccccggc
gccgcgcagccggcggccgcgcccgggcagtccggcacgtcggcgggcgtcgacacgcgc
gacgccgcgacgatcgtcgcgcgcgcgcaccacggctcgatgagccgcgccgaacgcacc
cgcaccgagtccgagctcaaggcgggacggctgcccgcggtcgtcgcgaccagctcgctc
gagctcggcatcgacatgggcgcgctcgacctcgtcgtgcaggtcggcgcgccgccgtcg
gtcgcgagcggcctgcagcgcgtcgggcgcgcgggccaccaggtcggggccgtgtcccgg
ggcgtcgtcttcccgacgtaccgcggcgagctcgtgccggcggcggtgaccgcgcagcgc
atgcgcaccggcgagctcgaggcgctggccgtgccggccaacccgctcgacgtcctcgcg
cagcaggtggtcgcgatggtcgcggtggacgactggccgctcgacgacctcgcgcgcgtc
gtgcggcgcgcggcgccgttcgcgacgctcggcgaggcgacgctgcgggccgtgctcgac
atgctcgcgggccgctacccgtcggaggacttcgcggagctgcgcccgcgcatcgtgtgg
gaccgggtcgccgacgtgctctcgggccgcccgggcgcgttgcggctcgcggtgacgagc
ggcggcacgatccccgaccggggcctgttcggggtgttcctcgcgggcggcggcgagacc
agcgacgtgccggccgacgccgagcgctcgggcggccgcgtgcgcggcggcaagcgggtc
ggcgagctcgacgaggagatggtctacgagtcgcgcgtcggcgacacgttcacgctgggg
tcgagcacgtggcgcatcgaggacatcacgcccgaccgcgtgctcgtcacgcccgccccc
gggatcccggggcgcctgccgttctggaagggcgacgccccgggacgccccgccgagctg
gggcgcgcggtgggcgggtgggtccgcgaggtcgcggcgctcggcgacgacgcggcgcgc
gagcgggtcgaggcggcggggctcgacgcgtgggcggcggacaacctgctcgcctatctg
cgcgagcagcaggaggcgacggggcaggtcccgagcgacaccgtggtcgtcgtcgagcgc
ttccgtgacgagctgggcgactggcgcgtcgtgctgcactcgccgtacggcgcacgtgtg
cacgcgccgtgggccctcgtgctcgcggcgcgcctgcgcgagcggtacggcgtcgacgcc
gccgccatgcacgccgacgacggcatcgtgctgcgcctgcccgacgtgctcgacggcgcc
gcggacggcgcgtgggacgccgacggcggcaccgactccgggccgcgcctcacgctcgac
gacctgctgctcgaccccgacgaggtgctcgcgtcggtgcgcgacgagctgggcgcgtcg
gcgatgttcgcggcgcggttccgcgaggcggccggccgtgcgctgctgctgccccgacgg
cgccccgaccggcgccagcccctgtggcagcagcggcagcgcgccgcgcagctgctcgag
gtcgcggcgcgctaccccgacttcccgatcctgctcgaggcggtgcgcgagtgcctgcag
gacgacttcgacaccgacgcgctgatcgagctcatgcgggacgtcggctcggggagggtg
cgcgtcgtcgaggtcacgacgacgcacccgtccccgttcgcgcagtcgctgctcttcggc
tacaccgcgcagttcctgtacgagggcgacgcgccgctcgcggagcgacgcgcggccgcg
ctcacgctcgacccgaccctgctggccgagctgctgggctcgggcggcgagtcgcagctc
gcggacctgctggaccccgaggccgtcgagcgcaccgaggccgagctcgcgggcacggcg
cccgaccggcaggcggggacgctcgagcaggtcgccgacgtgctgcgccgccacggcccg
ctgcccgtcgccgacgtgcaggcccgcacgcgcgccgacgtgcgcgacctcgtccccgac
tggctcgacgagctcgcggcggcccgccgggcgatccgtgtgcggctcggcggcgtcgcg
cccgagcgcgccgagcagtgggcggccgtcgaggacgcgggtcggctgcgcgacgcgctg
ggcgtcgcgctgcccgtcggggtgcccgaggtgttcaccgaggtcctgcccgacccgctc
gcggacctgctgcgccggcacgcgcgcacgcacggcccgttccccgcggcgcaggccgcc
gcgcggttcgggctcggcgtggccgtggtcggcgaggtgctgcgccgcctcgaggcgtcc
ggcgtgctcgtgcaggggcggctgcgccccgacgtgctgggcggcacgggcgacgagttc
tgcgacgccgacgtgctgcgccgcctgcggcagcgctcgctcgcggcgctgcggtcccag
gtcgagccggtcgacccgcgcgcgctgggcgtcttcctgccgcgctggcagggcgtgcac
gcggtcgggcgacggccctcgggcctgcgcggcgtggacgcggtggcccgcgcggtcgag
cagctcgcgggcttcgccgtgccggcgtcggcgctcgagacgcacgtgctgcccgcgcgg
gtgccggactactcccccgcgatgctggacgagctgacctcggccggtgaggtgctgtgg
gcgggccactcacccctcgcgggccacgacggcatggtgtcgctgcacccggtcgcggtc
gcggacctcacgctcgcccccgtgccggacctcgacgcttccgacgcgcccgcgagcggc
ccggtgcaccgggccgtgctcgcggcgctcgagggcggcggcgcgtggttcctcggtccg
ctcgtcgagcgggtcgccgccgtccggctcgacgacgaccctgcgccgggcacgacggcc
gtgctcgaggccctgtgggacctcgtgtgggcgggccgggtgacgaacgacggcctcggc
ccgctgcgcgcgtggctcgcgggcggcccgaccgcgcaccgcacgcaggccgcccccgcg
cgcgggcgcccgctgcgaccgcgactcgggctgcgggccggggtccggctcggcgtgccg
acggcacgtgacgacggcgggcgcgtcggcggctcgacgtccggcgcgggcgccggacgc
tggtccctgctcccggcacgcgagcccgacccgaccgtccgggcgcacgcgctggcggcg
cagctgctggaccggcacggcgtcctcacgcgggcggtggcccccgccgagggcgtctcc
gggcggttcggcgacgtgtaccgcgtgctcagcgcgctcgagcagtccggtcaggtgcgc
cgcgggtacttcgtcgaacggctcggggggtcgcagttcgcgctgccgggcgccgtcgac
cggctacgggcggacgccgaggtggtcgaccgcgcacgcgagcgcgcggccgaccggctc
gacaccgctcccctgggtccgggcctgccgtggcaggacgtgccgccgcccgcctggggg
gcgcccgccgggccgggcgcgtggtcgcccggggtgcccgacgccgaccggcgcgccggc
gaccagccgtgggtcgtcgtcctggccgcgaccgaccccgcgaacccctacggtgcggcg
ctcgcgtggcccgacgcccccgcgggacgtgacggcacgcggcaccgaccgggacgcaag
gccggcgccctcgtcgtgctcgtcgacggcggcctcgcgctgtacctcgaacggggcggg
cggacgctgctgacgttcagcgacgaccccgtgacgctcggcgcggcggccgacgcgctg
gtgcacgccgtgcgcgagcgccgcgcgggccggctcaccgtcgggcgcatcgacggcgcc
gaggtgctctcggcggacgtcctcgcgaccccggccgcgaccgcgctgaccggtgccggg
ttcgtgacgacgccgcgcgggctgcggctgcacgcgtcgtga

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