Citrus sinensis (Valencia orange): 102578002
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Entry
102578002 CDS
T02983
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102578002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102578002
03016 Transfer RNA biogenesis [BR:
cit03016
]
102578002
03012 Translation factors [BR:
cit03012
]
102578002
04131 Membrane trafficking [BR:
cit04131
]
102578002
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cit04147
]
102578002
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102578002
Transfer RNA biogenesis [BR:
cit03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
102578002
Translation factors [BR:
cit03012
]
Eukaryotic type
Elongation factors
102578002
Membrane trafficking [BR:
cit04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
102578002
Exosome [BR:
cit04147
]
Exosomal proteins
Proteins found in most exosomes
102578002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
Semialdhyde_dhC
SRPRB
AAA_22
Motif
Other DBs
NCBI-GeneID:
102578002
NCBI-ProteinID:
XP_006488147
LinkDB
All DBs
Position
8:complement(join(27785326..27786207,27786320..27786781))
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQT
VAVGVIKNVEKKDPTGAKVTKSAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagactcacatcaacattgtggtgattggccatgtcgactctggaaag
tcgaccaccaccggacacttgatctacaagcttggtggtattgacaagcgtgtgatcgag
aggttcgagaaggaagctgctgagatgaacaagaggtcattcaagtacgcctgggtgctc
gacaagctcaaggctgagcgtgaacgtggtattaccattgatattgccttgtggaagttc
gagaccaccaagtactactgcaccgtcattgatgctcccggacatcgtgactttatcaag
aacatgattaccggtacctcacaggctgactgtgccgtccttatcattgactccaccacc
ggtggttttgaagctggtatctccaaggatggtcagactcgtgagcatgctttgcttgct
ttcacccttggtgtgaagcagatgatttgctgctgtaacaagatggacgccaccaccccc
aagtactcaaaggctaggtacgatgaaattgtgaaggaggtctcttcctacctgaagaag
gttggatacaaccccgagaaagtcccattcgtgcccatctctggtttcgagggtgacaac
atgattgagaggtctaccaaccttgactggtacaagggtccaaccctgctggacgctctt
gacaatatcaatgagccaaagaggccctcagacaagccccttcgtctgccactccaggac
gtgtacaagattggtggcattggaaccgtcccagtgggtcgcgttgagaccggtgtcctc
aagcctggtatggtggtgacatttggcccctctggattgacaactgaggttaagtctgtt
gagatgcaccacgaagctctgcaggaggcccttccgggtgacaatgttggcttcaacgtg
aagaacgttgctgtcaaggatctcaagcgtggttttgttgcttccaactcgaaggatgat
ccggccagggaagctgccaacttcacctcacaggtcatcatcatgaaccaccctggccag
attggaaatggatatgccccagtgcttgactgccacacctcccacattgccgtcaagttt
tctgagctcgtgacgaagattgataggcgatcaggcaaggagcttgagaaggagcccaag
ttcttgaagaatggagatgctggaatggttaagatgattcccaccaagcccatggttgtt
gaaaccttctctgactacccacctcttggtcgttttgccgttagggacatgcgtcagact
gttgctgttggtgtgattaagaatgttgaaaagaaggatccaacaggtgccaaggtcacc
aagtctgcagccaagaagaagtga
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