Citrus sinensis (Valencia orange): 102617919
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Entry
102617919 CDS
T02983
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
102617919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102617919
Transcription factors [BR:
cit03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
102617919
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
102617919
NCBI-ProteinID:
XP_006490681
LinkDB
All DBs
Position
9:complement(join(1309078..1309143,1310603..1311145,1311482..1311886))
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AA seq
337 aa
AA seq
DB search
MGGVGDDTLSEYFFDEGETNLAEDDLFAIFESLDSVTPLDEAATAVSEARLVSQKSTSSS
ILQESDETDQLTETLPKNKRQKTAATSAVNSSDEANNTDGQQRMSHITVERNRRKQMNEN
LSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYCEVLSPRLVSSP
RPSPLSPRKPPLSPRLNLPISPRTPQPGSPYKPRLQQQGYLSPTKATNNNSVEPSPCSSS
TSSIDSINELVANSKSAIADVEVKFSGPNLLLKTVSPRIPGQAVKIISALEDLALEILHV
NISTVDETMHNSFTIKIGIECQLSAEELAQQIQQTFC
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgttggcgacgatactttgtccgaatatttttttgacgaaggggaaaccaac
ctggctgaagatgatttatttgctatttttgagagcttagacagtgtgacaccgttggat
gaagcagctacagctgttagtgaagctaggttggtgtctcagaagtcaacttcttcaagt
attttgcaagaatctgatgagactgatcagcttactgaaactttacccaaaaacaagaga
caaaagacagcagctacatcggctgttaactcttctgatgaagctaataacactgatggg
caacaaaggatgtctcatataactgtggagcgaaaccggagaaagcagatgaatgagaac
ttgtctgttttgcgctcactcatgccttgtttctatgtcaaaagaggagatcaagcatca
ataattggaggagttgtggattacatcaatgagttgcagcaagttctacaatcacttgaa
gccaagaagcaaagaaaagtttactgtgaagtattaagccctaggctagtttcatctcca
agaccttcaccacttagccctagaaagccaccactgagccctaggctcaacctacctatt
agcccaaggaccccacaaccaggcagcccttacaagcctagattgcagcaacaaggctat
ctctctccaacaaaggctactaataataattctgttgaaccatctccttgttcttcatca
acttcttcaattgacagcattaatgagctggtcgcgaactcaaagtctgcgatagctgac
gtagaggtcaagttttctggaccaaacctcctcttgaagaccgtgtctcctcggattcca
gggcaagccgtgaaaattatatctgctcttgaggaccttgcccttgagattctccatgtg
aacattagcaccgttgatgaaaccatgcataattccttcaccatcaagattggaattgaa
tgccaacttagtgccgaagaactggctcaacagattcagcaaacattctgctaa
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