KEGG   Citrus sinensis (Valencia orange): 102618631
Entry
102618631         CDS       T02983                                 
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
cit  Citrus sinensis (Valencia orange)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DRMBL DNA_ligase_A_C UBA_4 RMMBL Peptidase_M57 Lactamase_B_2
Other DBs
NCBI-GeneID: 102618631
NCBI-ProteinID: XP_006482181
LinkDB
Position
6:join(23407987..23410276,23410387..23410504,23410638..23410719,23411214..23411316,23411428..23411524,23411938..23412040,23412203..23412331,23412566..23412613,23412764..23412861,23412957..23413022,23413529..23413688,23413791..23413898,23414462..23414511,23415244..23415278,23415437..23415498,23415575..23415736,23415864..23415952,23416190..23416289,23417017..23417325)
AA seq 1402 aa
MDSHPSDKNLTLDSTHLFLSTQSSPPDSLIFAPIPRTLPPSKHIPSTRFLIDAFRYAADF
SVSYFLSHFHSDHYTGLSPSWSKGIIFCSEITSRLLSQILNINPKFIYPLPIKIPVLIDG
CEVVLVGANHCPGAVQFLFKVPGRNGGFERYVHTGDFRFCKTMLLQPVMNEFAGCDAVFL
DTTYCNPKFLFPLQEESVEYVVNVVNRVGGELNEGLQKRVLFLVATYVIGKEKILIEIFK
KCGRKVCVDSRKMEVLRVLGYGDSGVFTEDESETDVHVVGWNVLGETWPYFRPNFVRMKE
IMVERGYDKVVGFVPTGWTYEVKRNKFAVRSKDAFEIHLVPYSEHSNYDELREYVKFLKP
KQVIPTVGMDIEKLDSKHANKMRKYFAGLVDEMASKKEFLMGFHRGTSEIDENVEEGAGS
GSNEGLSKEGEVKLKKTKATEDNSSSILLDSSSRLEEFGSKDVTALDDEETEKMVQEIRN
CLPTWVTQNQILDLISSSGRNIVDAVSNFYEHETQLYEQVSACTTFISTSQTSSLDVSAS
TAKLNSDKTISQGSVKIPLSQEYKLPTIKHSIKSTLSPSKRKKTITNNPKKKGKVPSKME
SSGAKQPTITSFFNKLLPNMSQGDVVESKSEECPKDENPLQSNAIKTYGEEIDQFLKIIN
GNESLKGYAATLLEKTKGNVSMALDLYYDNQEGDHGKTVNRLEFSKSSVQFDNCNKDCSS
ALEKIVSEELQHITDMSVQRPSKELMDPTLVSLPPEKYDPIEHACWSSGQPAPYIHLART
FDLVEAERGKIKAMSMLGNMFRSLLALSPDDVLPAVYLCTNKIASNHENIELNIGGSLVT
SAIEEACGTNRSKIRDMYNRLGDLGDVAQECRQTQALLAPPPPLLIKDVYSMLCKISVQI
GSGSTARKKSLIVNLMCSCREKEMKFLVRTLVRNLRIGAMMRTILPALAQAVVMNSSLEF
SHEGKMENLKEKLQSLSAAAVEAYNILPSLDLLIPSLMNKGIGFSSSTLSMVPGVPIKPM
LAKITNGVPQVLKLFQNKAFTCEYKYDGQRAQIHKLVDGTVRIFSRNGDETTSRFPDLIS
IINEFCKPAAGTFILDAEVVAIDRKNGCKIMSFQELSSRERGGKDSVITIKSVKVDICVF
VFDIMFANGEQLLGYTLRQRRKYLKDLFYDEKMGYFQYAKEMTVEGDDNCLTSDVSLSKI
NNFLEEALHSSCEGIIVKSLDVDAGYSPSKRSDSWLKVKRDYVEGLNDSLDLVPIGAWHG
NGRKAGWYSPFLMACYNPETEEYQSVCRVMSGFSDSFYIEMKEFFSGDKILLKKPSYYRT
AEVPDMWFSPEVVWEIRGADFTISPVHQAAIGLVHPSRGISIRFPRFIRLVSDRNPDECS
TAADIAEMFHSQTRKMDVTAKD
NT seq 4209 nt   +upstreamnt  +downstreamnt
atggactctcatcccagtgacaaaaacttaaccctagactcaacccacctcttcctctcc
acccaatcttcccctcccgattccctcattttcgctccaattccccgcactttacctcct
tccaaacacattcccagcacccgcttcctcatcgacgcctttcgctacgccgccgatttc
tccgtctcttactttctctcccacttccactccgatcactacaccggcctttccccttct
tggtccaaaggtatcattttttgctccgaaatcacttcccgccttctttctcagatactc
aacataaaccccaagtttatctacccactcccaattaagatacctgttttaattgatggg
tgtgaagttgttcttgttggtgccaatcattgccctggtgctgtccagttcttgttcaag
gttccgggcagaaatggcggtttcgagaggtatgttcacacgggtgattttcggttttgt
aaaactatgttgttacagcctgtgatgaatgagttcgcgggttgtgatgctgtcttttta
gacaccacttattgtaatccgaagtttttgtttcctttgcaagaagagagtgttgagtat
gtggttaatgtggttaatagggttggaggcgagcttaatgagggtttgcagaagagggtt
ctgtttcttgttgcgacatacgttattgggaaagaaaagattttgatcgaaatttttaag
aaatgtggtagaaaagtgtgtgtggattcaagaaaaatggaggttttgcgggttttgggg
tatggggatagtggtgtttttacagaggatgagagtgagactgatgtgcatgttgttgga
tggaatgtgttgggggagacttggccatactttcggccgaattttgtgagaatgaaggaa
attatggtcgaaagaggatatgataaggttgttggttttgtgccgacggggtggacttat
gaggtgaagcgtaacaagttcgcagtgaggtccaaggacgcatttgaaattcatcttgtc
ccatatagtgagcattcaaattatgatgagcttagggagtatgtgaagtttttgaaaccc
aagcaagttatacctacggtgggcatggatattgagaagcttgatagcaagcatgctaat
aaaatgagaaagtattttgctgggttggttgatgaaatggctagcaagaaagaattttta
atgggttttcatcgagggactagcgaaattgatgaaaacgttgaagagggtgctggttca
ggctctaatgaggggctgagcaaagagggggaagtaaagttgaaaaaaactaaagccact
gaagacaacagttcatctattcttttagattcatcatctcgtttggaagaatttggctca
aaagatgtaactgctctagatgatgaggaaacagagaaaatggtacaagaaattcgtaac
tgtttgcctacatgggttactcaaaaccaaatattggatttgattagcagctcaggaagg
aacattgttgacgctgtgtctaatttctatgaacatgaaactcaattgtatgagcaagtc
tctgcatgtacgacttttatatctacatcccagaccagctcacttgatgtttctgcatcc
actgcaaaactaaattccgataagaccatttcccaaggaagtgtgaaaattcctttaagt
caggaatacaagttaccaaccataaagcattcaataaagagcaccctttctccaagcaaa
aggaagaaaactattaccaataaccctaagaaaaaagggaaagtcccatcaaaaatggaa
tctagtggggcaaagcagcctacaattacaagtttcttcaataaattgttgcctaacatg
tctcaaggggatgtggttgaatccaagtcagaggaatgccctaaagatgaaaatcctttg
caaagtaatgctatcaaaacatatggagaggagatagatcagttcttgaagataatcaat
ggcaatgaatcattaaaaggctatgctgccaccctcttagagaagacaaaaggaaatgtt
agtatggctctagatctatattatgataatcaagagggtgatcatggtaagactgtaaat
aggttagaattctctaaaagttcagttcagttcgacaattgtaataaggattgttcttct
gcattggagaaaatcgtttctgaagaattgcaacatataactgatatgtctgttcagaga
ccatcaaaagaactaatggatccaactcttgtgtcattaccacctgaaaagtacgatcca
atagagcatgcatgctggagtagtggacagcctgctccatatatccaccttgcacgaact
tttgacctggttgaggctgaaagaggcaagataaaagctatgtccatgttgggcaatatg
tttagaagtttgctggccctgtctcccgacgatgtgctacctgctgtgtatttgtgtacc
aataagattgcctctaaccatgaaaacatagaactgaacattggtggaagtttggtcaca
tcagcaatagaagaggcatgtggaactaatcggtctaaaattagggatatgtacaatagg
ttaggtgaccttggtgacgttgctcaagaatgccgacaaacacaggcattgcttgctcct
cctcctccacttcttatcaaagatgtatattctatgctttgcaaaataagtgtacaaata
ggtagtggaagtactgctaggaagaaaagccttattgtgaacctcatgtgttcttgtaga
gagaaggagatgaagtttctggttagaactctggtcaggaatttacgaattggagcaatg
atgagaactatattgcctgcattagctcaagctgttgttatgaattcttctcttgagttt
tcccatgaaggaaaaatggaaaatttgaaggagaaacttcagagtctttctgcagcggca
gttgaagcttataatattcttcccagtttggatttgctcatcccttctctcatgaataaa
ggcattggattttcatcatcaactttgtccatggttccaggagtacctatcaagcccatg
cttgcaaaaattaccaatggagttccacaagtactaaagctcttccaaaataaagcattt
acttgtgaatacaaatatgatggtcaacgtgcccaaattcacaaattagtggatggcact
gtgcgcatcttttcacgtaatggggatgaaacaacatcaagatttcctgatttaattagt
ataattaatgaattttgtaagcctgctgcggggactttcatactggatgccgaggtagtt
gcaattgataggaagaatggctgcaaaatcatgtctttccaagaactatcgtcaagagag
agaggaggaaaagattccgtgatcacaattaagagtgtaaaggtcgatatttgtgtattt
gtctttgatatcatgtttgccaatggagagcagctgttgggttataccctccgtcagaga
cgaaaatacttgaaagatttgttctatgatgagaaaatggggtactttcagtatgcaaag
gaaatgactgtggaaggtgatgataattgtttgacgagtgatgtctctctaagcaagata
aataattttcttgaagaggcactccactcctcatgtgaagggattatcgttaaatcgtta
gatgttgatgctggatattctccatcaaagcgtagtgactcatggttaaaggtgaagcga
gattatgtggaaggattaaatgactcgcttgatctagtccctattggtgcttggcatggc
aatgggaggaaagctggatggtacagtccattcctcatggcatgttacaatcccgagact
gaggaatatcaaagcgtatgccgtgtcatgtctgggttctcagattccttttacatagag
atgaaggaattcttttctggggataagatcttattgaaaaagccgtcttactatcgaaca
gctgaggttccagatatgtggttttctccagaagttgtttgggaaataagaggtgcagac
tttacaatatcaccggttcaccaggctgctataggtttggttcatccgagccgtggcatc
tcaatcagatttcctaggtttatacgccttgtatctgacagaaatccagatgaatgtagc
actgctgcagatatagctgaaatgtttcactctcaaacccggaagatggacgtgacagcc
aaagattga

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