KEGG   Citrus sinensis (Valencia orange): 102622088
Entry
102622088         CDS       T02983                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07889  Ras-related protein Rab-5C
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit04144  Endocytosis
cit04145  Phagosome
cit04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cit00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102622088
   04145 Phagosome
    102622088
   04148 Efferocytosis
    102622088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    102622088
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cit04147]
    102622088
   04031 GTP-binding proteins [BR:cit04031]
    102622088
Membrane trafficking [BR:cit04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    102622088
 Endosome - Lysosome transport
    102622088
Exosome [BR:cit04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102622088
  Exosomal proteins of other body fluids (saliva and urine)
   102622088
  Exosomal proteins of colorectal cancer cells
   102622088
  Exosomal proteins of bladder cancer cells
   102622088
GTP-binding proteins [BR:cit04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    102622088
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16 TniB
Other DBs
NCBI-GeneID: 102622088
NCBI-ProteinID: XP_006485607
UniProt: A0A067E152
LinkDB
Position
4:join(5125815..5125839,5126258..5126337,5126593..5126676,5127487..5127581,5127759..5127864,5128366..5128455,5128595..5128681,5129451..5129492)
AA seq 202 aa
MGCSGSVPARSSGQSGGLNNLENAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP
TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPD
SFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKT
ADNINQLFEEIAKRLPRPSPSS
NT seq 609 nt   +upstreamnt  +downstreamnt
atgggttgctcaggttctgttccagctaggagttctggccagtccggtggacttaacaac
ttggaaaatgcaggatcatctgatgcaaaaaacctacgtgttaagctggttctgttaggt
gattcaggtgttgggaaaagttgtattgttctccgctttgttcgtggccagtttgacccg
acatccaaggtaactgttggagcctccttcttgtcacagacgatagctttgcaagattct
acaacagttaagtttgaaatatgggatacagctggtcaagaaagatatgctgctctggca
ccactatattacagaggtgctgcagtcgcagttgttgtgtatgatataactagtccagat
tcattcaacaaagcgcaatactgggttaaggagctacaaaaacatggaagtcctgacata
gtcatggctttagttggtaacaaggctgatcttcatgagaagcgagaagtaccagctcaa
gatggcattgagtatgcggagaagaatgggatgttctttatcgaaacatcggccaagact
gcagataatataaatcagctgtttgaggaaattgctaagcgacttccccgcccatcacct
tcttcatga

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