Citrus sinensis (Valencia orange): 102622414
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Entry
102622414 CDS
T02983
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL28
KO
K12900
serine/arginine-rich splicing factor 10
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102622414
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cit01009
]
102622414
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102622414
Protein phosphatases and associated proteins [BR:
cit01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102622414
Spliceosome [BR:
cit03041
]
Common components
Common spliceosomal components
SR proteins
102622414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
102622414
NCBI-ProteinID:
XP_015389027
LinkDB
All DBs
Position
1:join(22533278..22533441,22533710..22533787,22533884..22534048,22534185..22534246,22534418..22534454,22535925..22536152,22536952..22536961)
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AA seq
247 aa
AA seq
DB search
MARYRSRSYSPRRRSRSPRIRGRKRYDDEPRRSYGDRRSPAPSGLLVRNLPLDARTEELR
VAFERYGPVKDVYLPKNYYTGEPRGFGFVKFRYAEDAAEAKQRLNHSLIGGREIKIVFAE
ENRKTPQEMRTSARVSGRYGGSSRRTPPRSPRRRYHSYSRSPSPVRVSRDRRARDDNRSP
RQSRSISRSLSPRDERDYRSNERYPSPMENGRRSPHDERGYEPSMSRSPRGNSRSPSRSR
SRSYSTR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcgagatacaggagccggagctacagtcctcgccgacggagcaggagtcctcggata
cgtggcagaaagcgatacgacgatgagcctcgcaggtcttacggagaccgacggtctcct
gctccctcgggcttgctcgttcgcaatctccctcttgacgctaggacggaggaacttagg
gttgcatttgagcgatatggtccggtaaaggatgtgtatcttcctaaaaattactacact
ggggagccacggggctttggattcgtgaagttccgttatgctgaagatgcggctgaagct
aagcaacgactcaaccattcacttattggtggacgagagataaaaattgtcttcgctgag
gagaataggaaaactcctcaagagatgcgtacgagtgcccgcgtaagtggtcgatatgga
ggaagctctaggaggactccaccaagatctccaagacgccgttatcattcttactcccgc
tcaccttcaccagtgcgtgtctcaagggatcgtagggcaagggatgataatcgttctcct
aggcaatctagatctatctcacgatccctttccccacgcgatgagagggactacaggtca
aacgagaggtatcctagtccaatggagaatggtcgtcggagtccacatgatgagaggggt
tatgaacccagcatgtcaaggagtcctaggggtaacagccgcagtccttccaggtctcgt
tcgcgatcttacagtactcgctga
DBGET
integrated database retrieval system
