KEGG   Citrus sinensis (Valencia orange): 102623441
Entry
102623441         CDS       T02983                                 
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
  KO
K08740  DNA mismatch repair protein MSH4
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cit03036]
    102623441
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    102623441
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV AAA_22 T2SSE AAA_14 AAA_29
Other DBs
NCBI-GeneID: 102623441
NCBI-ProteinID: XP_006477159
LinkDB
Position
3:complement(join(5443646..5443810,5444138..5444260,5444341..5444455,5444950..5445048,5445121..5445173,5445371..5445527,5445702..5445760,5445898..5445965,5446045..5446188,5447000..5447063,5447665..5447715,5447811..5447950,5448115..5448254,5449048..5449133,5449217..5449362,5449439..5449511,5449976..5450051,5450408..5450515,5450704..5450750,5451295..5451340,5451700..5451812,5451905..5451940,5452098..5452301,5453500..5453565))
AA seq 792 aa
MEDDAGEQSSFVTGLIQNRAKEVGVAAFDLRSAALHLSQYIETSSSYQNTKTLLHFYDPT
AIIVSPNKLAPDGMVGVSELIDRFYPSVRKVVMARGCFDDTKGAVMIKNLAAKEPSALSL
DTYYKQYYLCLAAAAAIIKWIEAEKGVIVTNHSLSVTFNGSFDHMNIDATSVRNLEIIEP
LHSALWGTSNKKRSLFHMLKTTKTIGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQFLRKFPKETDRVLCHFCFKPKKVTSKVLDVDNAKKSQTLISSIILLKTALDAL
PLLAKVLKDAQSFLLANIYRSVCENEKYASIRKRIGEVIDEDVLHARVPFVARTQQCFAI
KAGIDGLLDIARRSFCDTSEAVHNLANKYREELKLPNLKLPFNNRQGFYLSIPHKDIQGK
LPSTFIQVVKHGNNIHCSTLELASLNVRNKSAAGECYIRTEICLEALVDAIREDVSVLTL
LAEVLCLLDMIVNSFAHTISTKPVDRYTRPHFTENGPLAIDGGRHPILESIHNDFIPNNI
FISEAANMVIVTGPNMSGKSTYLQQVCLIVILAQIGCYVPAHFSTIRVVDRIFTRMGTVD
NLESNSSTFMTEMKETAFVMQNVSERSLIVMDELGRATSSSDGFAIAWSCCEHLLSLKAY
TIFASHMENLSELATIYPNVKVLHFYVVIRNNRLDFKFQLKDGPRHVPHYGLLLAEVAGL
PSTVIETARSITSRITEKEVKRMEINCLQYKQIQMLYHAAQRLICLKYSNQDEESIRHAL
QNLKESFIDGRI
NT seq 2379 nt   +upstreamnt  +downstreamnt
atggaagacgacgcaggagagcaatcgagcttcgtgactggtctcatccagaaccgagct
aaagaggtcggggtagctgcttttgacttgaggtctgctgcactgcatctttctcagtat
attgaaaccagcagctcatatcagaacacaaaaactttactgcacttttatgatcccacg
gccatcattgtttctccgaacaaactggcacctgatggaatggttggagtatctgaactg
atagatcgattttatccttcagtcagaaaggtagttatggcccgtggttgctttgatgat
accaagggtgctgtgatgattaaaaacttagcggccaaggagccctctgcgcttagtttg
gatacatactacaagcagtactacctctgtctggctgcagctgcagctattataaagtgg
atagaagcagagaaaggggtcattgtcacaaaccattctttgtcggttacttttaatgga
tcatttgaccacatgaatattgatgctactagtgtccggaatttggaaatcattgagcca
ctgcactctgccctctggggcacaagcaacaagaaaagaagtctgttccatatgctcaag
acaactaaaactattggaggaacaagactacttcgtgccaatctgttacagcctttaaaa
gatatcgaaacaatcaacacccgtctggactgcctggatgagctgatgagcaatgaacaa
ctgttctttggactttctcagttcctgcgtaagtttccgaaagagactgatagggtactt
tgtcacttctgcttcaaaccgaagaaagttacaagtaaggtcctggatgttgataatgct
aaaaagagccaaacattgatatcaagcattattctacttaaaaccgctttggatgccttg
cctttacttgcaaaggtgcttaaggacgcacaaagttttcttcttgcaaacatatacagg
tcggtatgtgaaaatgagaagtatgcttccattagaaagagaattggagaggtaattgat
gaagatgtgcttcatgcacgggttccttttgttgctcgcacacagcagtgttttgctatt
aaggctggaattgatggtcttctggatattgctcggagatcattctgtgataccagtgaa
gctgtacacaatcttgcaaacaagtatcgtgaagagctcaagctgccaaatttgaagctc
cctttcaataataggcaaggcttttacttaagcattccacataaagacattcaaggaaag
cttcctagcacgttcattcaggtcgtgaaacatggaaacaacatacattgctcaactttg
gaactcgcttccctgaatgtcagaaataagtctgcagctggcgagtgctatatacgaacg
gaaatttgcctggaagcattggtagatgccataagggaggacgtctctgtgctcacactg
cttgcagaggtcctgtgcctattggatatgattgttaattcatttgcccatacaatatca
actaagcctgttgacagatatactcgaccacattttacagagaatggcccactagcaatt
gatggcggaagacaccctatcctagaaagcatacataatgacttcattcccaacaatatc
tttatttcagaagcagcaaacatggtgattgtcacaggtccaaacatgagcggaaagagc
acttatcttcaacaagtctgtctcatagttattcttgcacagattggatgttatgttcca
gctcacttctcgacaataagggttgttgatcgcatatttacaaggatgggtacagtggat
aatcttgaatcaaactctagcacgttcatgacagagatgaaagaaacagcttttgttatg
cagaatgtgtctgaaaggagtctgattgtcatggatgagcttggaagggctacttcttcc
tctgatggatttgcaattgcatggagctgctgtgagcatctcttatcactcaaagcgtat
actatatttgcctcacatatggagaacctatcagagttggcaaccatctatccaaatgtg
aaagttcttcatttctacgttgttataagaaacaaccgtttagatttcaagtttcaactc
aaggatggcccaagacacgtcccacactatggccttctattagccgaagtagcaggatta
ccaagcacagtgattgagaccgccagaagcataacgtcaaggatcaccgagaaggaagta
aagcgaatggaaataaactgcctgcaatataaacaaattcagatgctttaccatgcagct
caacggctcatatgcttaaaatactccaaccaagatgaagaatcaatccgacatgcattg
cagaatctgaaagaaagcttcatagacggaaggatctga

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