KEGG   Citrus sinensis (Valencia orange): 102628383
Entry
102628383         CDS       T02983                                 
Name
(RefSeq) GTP-binding protein YPTM2-like
  KO
K07874  Ras-related protein Rab-1A
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    102628383
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cit04147]
    102628383
   04031 GTP-binding proteins [BR:cit04031]
    102628383
Membrane trafficking [BR:cit04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    102628383
 Autophagy
  Other autophagy associated proteins
    102628383
Exosome [BR:cit04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102628383
  Exosomal proteins of other body fluids (saliva and urine)
   102628383
  Exosomal proteins of colorectal cancer cells
   102628383
GTP-binding proteins [BR:cit04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    102628383
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase GTP_EFTU MMR_HSR1 Gtr1_RagA SRPRB AAA LANC_like AAA_29 AAA_5 AAA_16 AAA_22 ABC_tran G-alpha TniB Dioxygenase_N
Other DBs
NCBI-GeneID: 102628383
NCBI-ProteinID: XP_006490023
LinkDB
Position
9:complement(join(5500276..5500372,5500612..5500715,5500819..5500974,5501075..5501146,5501532..5501579,5501667..5501714,5502431..5502503,5503173..5503186))
AA seq 203 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQ
IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
NKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMN
NARPPTVQIKGQPVNQKASCCST
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatcctgaatatgactacttgttcaagcttttgctgattggagactctggagttggc
aaatcgtgtcttcttctgagatttgctgatgattcgtacctggacagttacattagcact
attggggttgactttaaaattcgcacagtggagcaagacgggaagactgtaaaactccaa
atttgggacactgcagggcaagaacgattcaggacaatcactagcagctactaccgtgga
gcacatggcattatcattgtttatgatgttacagaccaagagagcttcaacaacgttaag
cagtggttgaatgaaattgatcgctatgcaagtgaaaatgtaaacaagcttctggttgga
aacaagtgtgatctcactgataagaaggttgtctcttatgaaacagcgaaggcatttgct
gatgaaattggcatcccgttcatggagaccagcgcaaaggattctatgaacgtggaacaa
gcttttatggctatgactgctgacattaagaacaggatggcaagtcaacctgcaatgaac
aatgcaaggccaccaactgtgcagataaaaggacaaccggtgaaccagaaggccagctgc
tgctcaacttaa

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