Citrus sinensis (Valencia orange): 102629098
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Entry
102629098 CDS
T02983
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
102629098
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cit04040
]
102629098
Ion channels [BR:
cit04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102629098
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
102629098
NCBI-ProteinID:
XP_006477540
LinkDB
All DBs
Position
3:join(2926106..2926543,2926729..2926947,2927164..2927471,2927623..2927734,2927872..2928108,2928255..2929013)
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AA seq
690 aa
AA seq
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MNTLQLYASSGLTKTLSLGHKDKPWLSYKILDPQSDFVNTWNHIFFVACIIALFLDPLYF
YVPIISTDFTCMTVDYTLVRAVTLLRSMVDALFFAHIIVKFRTAFVAPSSRVVGRGDLVR
DPGVIARRYLKSDFIVDLVATLPLPQITSYLVIVIPGTDYQAPDHANGTIVLIVFLQYIP
RVLILITLNERIMKTAGVIAKISWSGSAFTLLFYMLASHIIGATWYFFSFKRQHACWIQV
CEGERNSTHSPSCDPIFIDCSVSELPERNAWLEHSSLYDECATEEQQFPFGIFYDAIDKQ
VAETNFIRKYCYCLWWGLKNLSSYGQNLTTSTYILEILFSMVICILGLILFSYLLGKMQN
YVQSTTAKLEDWRIRRRDTEEWMRHRQLPEGLRERVRRFLQYKWLATRGVDEESILQSLP
LDLRRTIQRHLCLAFVRRVPFFAQMDQQLLDAICERLYSSLNTRDTYLIREGDPVNEMIF
IIRGQVESSTTNGGRAGFYNSITLKTGDFCGEELLTWALMPVSTLNLPLSTRTVKSLTEV
EAFALRAEDLKFVSSQFKRLHSKRLQHAFRYYSHQWRGWGASFIQAAWRRYKRRKKAVEL
AIKEGLYEIVEEEYPVEDSAGGAIESGAEGLAVEYATDADSPGTALLAPRLSTKRLSLRV
PAFNPDDSSMKMPKLFKPTDPDFSADHHDN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaataccctccaattgtacgcgtcgtctgggttgacaaaaacgttgtccctgggacac
aaagacaagccatggctgagttacaaaatcctggatcctcagagcgactttgtaaacaca
tggaatcacatattttttgtagcatgtatcattgccttgtttctggaccctctctacttt
tacgttccaattatttccaccgacttcacatgcatgacggtcgattacaccttagttagg
gcggtcactttgttgagaagcatggtggacgctttgttcttcgcgcacattattgttaag
tttaggacagctttcgtggcccctagttctagggttgttggaagaggagaccttgtgagg
gaccccggtgtcattgctagacgctacctgaagtctgattttattgttgatcttgtagct
acgcttcctcttccccagattactagctatttggtgatagtgattccagggacagattat
caagcacctgatcatgccaacggcactattgttttaattgtttttcttcaatatattcca
agagttctcattttgattactcttaacgaacggattatgaaaactgctggggttatagcc
aagatttcttggtcggggtcagctttcactctccttttctatatgcttgccagccacatt
ataggagctacatggtatttcttctcttttaagcggcagcatgcatgctggatacaagtg
tgtgagggagagaggaactcaacccactccccatcttgtgatcccatttttatcgactgt
tctgttagtgagctacctgaacgcaatgcttggctggagcactcaagcctctatgatgaa
tgtgctacagaagagcaacaatttccatttggaatattttatgatgctattgataaacaa
gttgctgaaacaaatttcatcagaaagtattgctactgcctatggtggggtttgaaaaat
ctaagctcatacggacaaaatctaacgacaagtacttacatccttgaaatattattcagc
atggtcatttgcatccttggtctaatcctgttctcatatctcttaggaaaaatgcagaac
tatgtgcaatccacgactgctaaactagaagactggaggattagaaggagagatacagag
gagtggatgaggcaccgtcaattgccagaagggcttcgagaacgtgtgcgccggtttctt
caatacaagtggcttgccaccaggggtgtggatgaagaatccattttgcaatctttacct
ttggatctccgacgcactattcagaggcatctttgtctagccttcgttcgacgggttcca
ttttttgcacaaatggatcagcagctcttagatgccatatgcgaacgtctctattcatct
ttaaacaccagagatacatacctcattcgcgaaggcgatccagtgaacgaaatgattttc
atcattagaggacaagtagaaagctcaacaacaaatggaggaagggcgggattctacaac
tcgatcactctcaagacgggcgatttctgcggcgaagaactgttgacatgggccctaatg
ccagtctccacactcaatctgccgttatcaacgagaacagtcaagtcacttactgaagtt
gaagcatttgcactcagagctgaggacctcaagtttgtttcaagccagtttaagcgccta
cacagcaagagactacagcatgcatttagatactattcgcaccaatggagaggctgggga
gctagttttattcaagctgcttggagacgatataagaggcgaaagaaggcggtggagctg
gcgataaaagaagggttgtatgaaattgtagaagaggaataccccgtcgaagactctgcg
ggaggagctattgagtctggcgctgaggggctagcagttgaatatgcaaccgatgcagat
agtcctggtacggcactactcgctccaagattgagcacaaaacggctgagtctgagagta
ccagcatttaatcctgacgattccagcatgaaaatgcctaagctgtttaagcctacagat
cctgatttctctgcggaccatcatgataattga
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