Citrobacter tructae: E4Z61_17620
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Entry
E4Z61_17620 CDS
T07250
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
citz
Citrobacter tructae
Pathway
citz00540
Lipopolysaccharide biosynthesis
citz01100
Metabolic pathways
citz01250
Biosynthesis of nucleotide sugars
Module
citz_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
citz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
E4Z61_17620 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
citz01005
]
E4Z61_17620 (rfaD)
Enzymes [BR:
citz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
E4Z61_17620 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
citz01005
]
Core region
E4Z61_17620 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
QBX82068
UniProt:
A0A4P7J5Q0
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Position
complement(3531961..3532893)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEEFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQIMPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGETPKLFEGSENFKRDFVYVGDVAAVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGSIEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaaagccctgaat
gataaaggcatcaccgatattctggtggtggacaacctgaaagacggcaccaagtttgtc
aacctggtggatctgaatattgctgactacatggacaaggaagacttcctgatccagatt
atggccggtgaagaattcggcgacatcgaggcgattttccacgaaggcgcatgctcttcc
accaccgagtgggatggcaagtatatgatggacaataactatcaatactccaaagagctg
ctgcactactgtctggagcgcgaaattccgttcctgtacgcctcttctgcagccacttac
ggcggtcgtacttctgatttcatcgaatcccgtgaatatgagaaaccgctgaacgtttac
ggctactcaaaattcctgtttgacgaatacgttcgtcaaatcatgcctgaagccaattca
cagattgttggcttccgctatttcaacgtctacggaccgcgtgaaggccacaaaggcagc
atggcgagcgtcgctttccacctcaacacccagctcaacaatggcgaaacaccgaagctg
tttgaaggcagtgaaaacttcaaacgtgatttcgtttatgttggcgatgtcgctgcggta
aatctgtggttcctggaaaacggcgtatccggcatctttaacctcggtaccggtcgcgcg
gaatctttccaggccgttgccgatgcaacgcttgcgtatcataaaaaaggcagcattgag
tacatcccgttcccggaaaaactgaaaggccgctatcaggcgtttactcaggcggatctg
actaacctgcgcgcagcgggctacgacaaaccgtttaagaccgttgccgaaggcgtaacg
gaatatatggcctggctgaaccgcgacgcgtaa
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