KEGG   Citrobacter sp. XT1-2-2: M4I31_02645
Entry
M4I31_02645       CDS       T09034                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
cix  Citrobacter sp. XT1-2-2
Pathway
cix02020  Two-component system
cix02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cix00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    M4I31_02645 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    M4I31_02645 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cix03021]
    M4I31_02645 (rpoN)
Transcription machinery [BR:cix03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     M4I31_02645 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: UQX59882
LinkDB
Position
complement(544485..545918)
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHDEIDTQE
KQDSESLDTADALEQKEMPEELPLDASWDEIYTAGTPSGTSGDYIDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVSLDDILESMGDDDVGMDEIEAVLK
RVQRFDPVGVAAKDLRDCLLIQLSQFDKSTPWLEEARLIISDHLDLLANHDFRSLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNDRWVVELNGDSIPRLQIN
QHYAAMCNSARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgcctcagctacaa
caggcgatccgtctgttgcagttgtccacgctggaacttcagcaagaacttcagcaagcg
ctggaaagtaacccactgctcgagcaaaccgatcttcacgacgaaattgatacccaggaa
aaacaggacagcgaatccctcgataccgcagatgcgctcgaacaaaaagagatgccagag
gaattgccgcttgacgccagttgggatgaaatctacaccgccggtacgccttcaggcacc
agcggagattacattgacgacgaactgcctgtttatcagggggagaccacgcaatcgctg
caggattacctgatgtggcaagtggagctgaccccgttctcggataccgatcgcgccatt
gcgacatcgattgttgatgcggttgacgaaaccggttatctcaccgtgtccctggacgat
attctcgaaagcatgggcgatgatgacgtcggtatggatgaaatcgaagccgtgcttaaa
cgcgttcagcgctttgatcccgttggcgtggcagccaaagatctgcgtgactgcttactg
atccaactttcgcaatttgataagtccacaccatggctggaagaagcgcgcctgatcatc
agcgatcacctcgatctgttagccaaccatgactttcgctcgctgatgcgcgtaacccga
ctgaaagaagacgtgctgaaagaagccgtcaacctcatccagtcgctcgatccccgccca
ggacagtcgatccaaaccggcgagccggaatacgtcatcccggatgtgctggtgcgtaag
cataacgatcgttgggtggtcgaactcaacggcgacagcattccacgcttgcagattaac
cagcactacgccgcgatgtgcaatagcgcgcgcaacgatgccgacagccagtttattcgt
agcaatttgcaggatgcgaagtggctgattaaaagtctggaaagccgcaatgatacgctg
ctgcgcgtcagtcgctgtatcgttgaacagcagcaggccttctttgagcaaggcgaagaa
tttatgaaaccgatggtgctggcggatatcgcccaagccgtcgagatgcacgaatcgacc
atttcccgagtgaccacgcaaaagtatttgcacagtccgcgcggcatatttgaactgaag
tatttcttttccagtcacgttaacactgaaggcgggggcgaagcctcatccacagcgatc
cgcgcactggtgaagaaattaattgctgcggagaaccccgcgaaaccgctgagtgatagc
aagttaacctctatgctgtcggatcagggtatcatggtggcgcgccgcaccgttgcgaag
taccgagagtctttatccattccgccgtctaaccagcgcaaacaactggtgtga

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