Citrobacter sp. XT1-2-2: M4I31_02645
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Entry
M4I31_02645 CDS
T09034
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
cix
Citrobacter sp. XT1-2-2
Pathway
cix02020
Two-component system
cix02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M4I31_02645 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M4I31_02645 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cix03021
]
M4I31_02645 (rpoN)
Transcription machinery [BR:
cix03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M4I31_02645 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
UQX59882
LinkDB
All DBs
Position
complement(544485..545918)
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AA seq
477 aa
AA seq
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MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHDEIDTQE
KQDSESLDTADALEQKEMPEELPLDASWDEIYTAGTPSGTSGDYIDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVSLDDILESMGDDDVGMDEIEAVLK
RVQRFDPVGVAAKDLRDCLLIQLSQFDKSTPWLEEARLIISDHLDLLANHDFRSLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNDRWVVELNGDSIPRLQIN
QHYAAMCNSARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgcctcagctacaa
caggcgatccgtctgttgcagttgtccacgctggaacttcagcaagaacttcagcaagcg
ctggaaagtaacccactgctcgagcaaaccgatcttcacgacgaaattgatacccaggaa
aaacaggacagcgaatccctcgataccgcagatgcgctcgaacaaaaagagatgccagag
gaattgccgcttgacgccagttgggatgaaatctacaccgccggtacgccttcaggcacc
agcggagattacattgacgacgaactgcctgtttatcagggggagaccacgcaatcgctg
caggattacctgatgtggcaagtggagctgaccccgttctcggataccgatcgcgccatt
gcgacatcgattgttgatgcggttgacgaaaccggttatctcaccgtgtccctggacgat
attctcgaaagcatgggcgatgatgacgtcggtatggatgaaatcgaagccgtgcttaaa
cgcgttcagcgctttgatcccgttggcgtggcagccaaagatctgcgtgactgcttactg
atccaactttcgcaatttgataagtccacaccatggctggaagaagcgcgcctgatcatc
agcgatcacctcgatctgttagccaaccatgactttcgctcgctgatgcgcgtaacccga
ctgaaagaagacgtgctgaaagaagccgtcaacctcatccagtcgctcgatccccgccca
ggacagtcgatccaaaccggcgagccggaatacgtcatcccggatgtgctggtgcgtaag
cataacgatcgttgggtggtcgaactcaacggcgacagcattccacgcttgcagattaac
cagcactacgccgcgatgtgcaatagcgcgcgcaacgatgccgacagccagtttattcgt
agcaatttgcaggatgcgaagtggctgattaaaagtctggaaagccgcaatgatacgctg
ctgcgcgtcagtcgctgtatcgttgaacagcagcaggccttctttgagcaaggcgaagaa
tttatgaaaccgatggtgctggcggatatcgcccaagccgtcgagatgcacgaatcgacc
atttcccgagtgaccacgcaaaagtatttgcacagtccgcgcggcatatttgaactgaag
tatttcttttccagtcacgttaacactgaaggcgggggcgaagcctcatccacagcgatc
cgcgcactggtgaagaaattaattgctgcggagaaccccgcgaaaccgctgagtgatagc
aagttaacctctatgctgtcggatcagggtatcatggtggcgcgccgcaccgttgcgaag
taccgagagtctttatccattccgccgtctaaccagcgcaaacaactggtgtga
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