Citrobacter sp. XT1-2-2: M4I31_22355
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Entry
M4I31_22355 CDS
T09034
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
KO
K05787
DNA-binding protein HU-alpha
Organism
cix
Citrobacter sp. XT1-2-2
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cix03032
]
M4I31_22355 (hupA)
03036 Chromosome and associated proteins [BR:
cix03036
]
M4I31_22355 (hupA)
03400 DNA repair and recombination proteins [BR:
cix03400
]
M4I31_22355 (hupA)
DNA replication proteins [BR:
cix03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M4I31_22355 (hupA)
Chromosome and associated proteins [BR:
cix03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
M4I31_22355 (hupA)
DNA repair and recombination proteins [BR:
cix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
M4I31_22355 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
UQX59094
LinkDB
All DBs
Position
complement(4707606..4707878)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLIDVIADKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactcaactgattgatgtaattgcagacaaagcagaactgtctaaaacacag
gctaaagctgctctggaatccactctggctgctattactgagtctctgaaagaaggcgat
gctgtacaactggttggtttcggtaccttcaaagtgaaccaccgtgctgagcgcactggc
cgcaacccgcagaccggtaaagaaatcaaaatcgccgcagctaacgtaccggcatttgtt
tctggtaaagcactgaaagacgcggttaagtaa
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