Callithrix jacchus (white-tufted-ear marmoset): 100390606
Help
Entry
100390606 CDS
T03264
Symbol
TAF4
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03022
Basal transcription factors
cjc05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100390606 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100390606 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjc03021
]
100390606 (TAF4)
03036 Chromosome and associated proteins [BR:
cjc03036
]
100390606 (TAF4)
Transcription machinery [BR:
cjc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100390606 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
100390606 (TAF4)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100390606 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
100390606
NCBI-ProteinID:
XP_035154982
Ensembl:
ENSCJAG00000014438
LinkDB
All DBs
Position
5:complement(55293732..55375066)
Genome browser
AA seq
1083 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAQRTPEVRAAAAGALGN
HVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPRRPGPPSPRLPLVPAGPA
PPAAKLRPPPEGSAGACAPVPAAAAAAAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPG
PGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTS
PFVGAGAPPAPAAPSPPAAPAPAAPAAAPPPPSPAPTTLARPPGHPTGPPTAAPAAPPPA
AAQNGGSAGAVPAPAPTTGGPAGVSGQPGPGAAAAAPAPGVKAESPKTVVQAAPPPAQTL
AASGPASTAASMVIGPTMQGALPSPVAVPPPAPGTPTGLPKGAAGAVTQSLPRTPTATTS
GIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAH
AQPQTTMAPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPSATLQ
RSPGVQPQLVLGGAAQTASLGTATAVQTGTPQRTVPGATTTSSAATETMENVKKCKNFLS
TLIKLASSGKQSTETAANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSL
PALRQLTPDSAAFIQQSQQQPPPASQATTALTAVVLSGSVQRTAGKTAATVTSALQPPVL
SLTQPTQVGVGKQGQPTPLVIQQPPKPGALIRPPQVTLTQTPMVALRQPHNRIMLTTPQP
VQLSPLQPVPVVKPAVLPGAKALSAVSAQAAAAQKNKLKEPGGGSFRDDDDINDVASMAG
VNLSEESARILATNSELVGTLTRSCKDETFLLSAPLQRRILEIGKKHGITELHPDVVSYV
SHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQE
REILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDC
PGPGSGAEGSGSGSVVPGSSGVGTPRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKA
FLK
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgcagcgcacgcccgaggtgcgggccgcggccgccggcgcgctcgggaac
catgttgtgagcggcagcccggccggagccgcgggcgcagggccggccgcccccgccgag
ggcgcgcccggagcggcgccggagccgccccccgcaggtagagcgcggccggggggcggg
gggccgcggcgcccgggccccccctcaccgcgcctcccccttgtccccgcagggcccgcg
ccgcccgccgcgaagctgaggccgccgcccgagggcagcgcgggggcctgcgccccggtg
cccgccgccgccgccgccgccgccgcggggcccgagcccgcccccgccggccccgccaag
cccgccggccccgccgcgctggccgcccgcgccggccccggccccggccctgggcccggc
cccggccccggccccggcaaacccgccggccccggcgccgcgcaaactttgaatgggagc
gccgcgctgctgaactcgcaccacgccgccgcacctgctgtcagcctggtcaacaacggg
cccgccgcgctgctgccgctgcctaagcccgccgcccccggcactgtcatccagacgtcc
cccttcgtgggcgccggcgcgccccccgcgcccgccgcgccctcgccccctgccgccccc
gcgcccgccgcccccgcagctgccccgcccccgccgtcccccgcgcccaccaccctggcc
cggccgcccggccaccccaccggacccccgaccgccgcgcccgccgcgccgccccccgcc
gccgcccagaacgggggcagcgccggagcggtccccgcccccgccccgaccactgggggc
cccgcgggggtcagcggacagcctgggcccggcgcggcggccgcggcgcccgcgccgggg
gtcaaggccgagtcgcccaagacggtggtgcaggcggcccccccgccagcgcagaccctg
gcggccagcggcccggccagcacggcggccagcatggtcatcgggccaactatgcaaggg
gctttgcccagtcccgtcgccgtcccgccgcctgcccccgggacccccaccgggctgccc
aaaggcgcggccggcgcggtgacccagagcctgccccggacgcctacggccaccaccagc
gggatccgggccactctgacgcccaccgtgctggctcctcgtctgccgcagccgcctcag
aacccgaccaacatccagaacttccagctgcccccaggaatggttctcgtccgaagtgag
aatgggcagctcttaatgattcctcagcaggccctggcccagatgcaggcgcaagcccat
gcccagcctcagaccaccatggcaccccgccctgccacccccacaagtgcccctcctgtc
cagatctccaccgtacaggcacctgggacacctatcattgcccggcaggtgaccccaact
accataattaagcaagtgtctcaggcccagaccacggtgcagcccagcgcaaccctacag
cgctcgcccggcgtccagcctcagctcgttctgggtggtgctgcccagacggcttcactc
gggacggcgacggctgttcagacagggactcctcagcgcacagttccaggggcgactacc
acttcctcagctgccacagaaaccatggaaaacgtgaagaaatgtaaaaattttctatct
acgttaataaaactggcttcgtctggcaagcagtccacagagacagcagctaatgtgaaa
gagctcgtgcagaatttactggatggaaaaatcgaagcagaagatttcacaagcaggtta
taccgagaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagctta
cctgccttgagacagctgacccccgactccgcggccttcatccagcagagccagcagcag
ccgccacccgcctcacaggccacgactgcactcacggctgtggtgctgagtggctcggtc
cagcgcacagccgggaagacggcggccactgtgaccagtgccctccagccccctgtgctc
agcctcacgcagcccacgcaggtcggcgtcggcaagcaggggcaacccacgccgctggtg
atccagcagcctccgaagccaggagccttgatccggcccccgcaggtgactttgacgcag
acacccatggtcgcgctgcggcagcctcacaaccggatcatgctcactacacctcagccg
gtccagctgagcccgctgcagccagtccctgtggtgaaacccgccgtgttacctggagcc
aaagccctttctgctgtctcggcacaagcagctgctgcacagaaaaataaactcaaggag
cctgggggaggttcgtttcgggatgatgatgacattaatgatgttgcatcgatggcagga
gtaaacctgtcagaagaaagtgcaagaatattagccaccaactctgaactggtgggcacg
ctgacacggtcctgtaaagacgaaaccttcctcctctcagcgcctttgcagagaagaata
ttagaaataggtaaaaaacacggtatcactgaattacatccagatgtagtaagttatgta
tcacatgccacgcaacaaaggctacagaatcttgtagagaaaatatcagaaacggctcag
cagaagaacttctcttacaaggatgacgacagatatgagcaggcgagtgatgtccgggca
cagctcaagttttttgaacagcttgatcaaatcgaaaagcagaggaaggacgagcaggag
cgggagatcctgatgagggcagcaaagtctcggtcaagacaagaagatccagaacagtta
aggctgaaacagaaggcaaaggagatgcagcaacaggaactggcacagatgagacagcgc
gacgccaacctcacggcactagcagcgatcgggcccaggaaaaagaggaaagtggactgt
ccgggaccgggttcgggagcagaggggtcgggctccggctcagtggtcccaggcagctcg
ggtgttggaacccccaggcagttcacacgacaaagaattacacgggtcaacctcagggac
ctcatattttgtttagaaaatgaacgagagacaagccattcactgctgctctacaaagca
ttccttaagtga
DBGET
integrated database retrieval system
