KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100393120
Entry
100393120         CDS       T03264                                 
Symbol
LARP1
Name
(RefSeq) la-related protein 1 isoform X3
  KO
K18757  la-related protein 1
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjc03019]
    100393120 (LARP1)
Messenger RNA biogenesis [BR:cjc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100393120 (LARP1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 100393120
NCBI-ProteinID: XP_017824600
Ensembl: ENSCJAG00000004454
LinkDB
Position
2:51958786..52096143
AA seq 1082 aa
MATQVEPLLPGGAPLLQAEEHGGLVRKKPPPAPEGKGEPGTNDVRGGEPDGGARRPRPPC
AKPHKEGTGQQERENLRPLQPPGAEGPAVSDGEEGGGEPGGGGGPAGAAAAGRRDFVEAP
PPKVNPWTKNALLPVLTTVNGQSPPEHSAPAKVVRAAVPKQRKGSKVGDFGDAINWPTPG
EIAHKSVQPQSHKPQPARKLPPKKDMKEQEKGEGSDSKESPKTKSDESGEEKNGDEDCQR
GGQKKKGNKHKWVPLQIDMKPEVPREKLASRPTRPPEPRHIPANRGEIKGSEPATYVPVA
PPTPAWQPEIKPEPAWHDQDETSSVKSDGAGGARASFRGRGRGRGRGRGRGRGGTRTHFD
YQFGYRKFDGVEGPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSVDNL
ERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRREEP
EKWPLPGPPIVDYSQTDFSQLLNCPEFVPRQHYQKETESAPGSPRAVTPVSTKTEEVSNL
KTLPKGLSASLPDLDSENWIEVKKRPRPSPARPKLPSQQLMSKDQDEQEELDFLFDEEME
QMDGRKNTFTAWSDEESDYEIDDRDVNKILIVTQTPHYMRRHPGGDRTGNHTSRAKMSAE
LAKVINDGLFYYEQDLWAEKFEPEYSQIKQEVENFKKVNMISREQFDTLTPEPPVDPNQE
VPPGPPRFQQVPTDALANKLFGAPEPSTIARSLPTTVPESPNYRNTRTPRTPRTPQLKDS
SQTSRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPSE
GTPTVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNT
LFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDF
QEETVKDYEAGQLYGLEKFWAFLKYSKAKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEG
NHKRHSVVAGGGGGEGRKRCPSQSSSRPVAMISQPPTPPTGQPVREDAKWTSQHSNTQTL
GK
NT seq 3249 nt   +upstreamnt  +downstreamnt
atggccactcaggtggagccgctgctgcctgggggcgccccgctcttgcaggccgaagag
cacggggggctggtgaggaagaagccgccgccggcgcctgagggcaagggcgagcccggg
acaaacgacgttcgcgggggggagccggacggcggcgctcggagaccccggccgccttgc
gccaagccgcacaaggagggcactgggcagcaggagcgcgagaacctgcggcctctgcag
ccgccgggcgccgagggcccagccgtcagcgacggggaggagggcggcggcgagccaggc
ggtggcggaggacctgccggagccgcggccgcggggcgccgggacttcgtggaagccccc
cctcccaaggtgaacccgtggactaagaacgcactgctgccggtcctgaccaccgtgaac
ggacagtcccccccagaacactctgccccagccaaggtggtgagagcagctgttcctaaa
cagcgcaaaggcagcaaggttggtgactttggagatgcaatcaattggcctacacctgga
gagatagcccacaagagtgtgcagccacagtcccacaagcctcagcctgcccgtaaactg
ccacccaagaaggacatgaaggaacaggagaaaggagaagggagcgatagtaaggagagt
ccgaaaaccaaatcggacgaatcaggggaggaaaagaatggagatgaagattgccagcga
ggcgggcagaagaagaaaggaaacaaacacaagtgggttccattacaaattgacatgaag
cctgaagtgcccagagagaaactggcttcacgccccactcgcccgccagagccgagacac
atacctgccaaccgcggagagatcaaagggtctgagcctgccacctacgtgcccgtggcc
ccccccaccccagcctggcaaccagagatcaaaccggagcctgcctggcacgaccaggat
gagacatcgagtgtgaagagtgatggggctggtggggcgcgggcttccttccgtggccgt
ggacgggggcgtggtcgtggccggggacgcggccggggtggcactcgaacccattttgac
taccagtttggctaccgaaagtttgatggtgtggaggggcctcgtacccccaagtacatg
aacaacatcacctactactttgacaatgtcagcagcaccgagctttacagcgtggatcag
gaactgctcaaagactacatcaagcgccagattgaatactacttcagcgtggacaattta
gagcgagacttcttcctccgaaggaaaatggatgctgatggtttcctacccatcactctt
attgcttccttccaccgagtgcaggcccttaccactgacatttcactcatctttgcggcc
ctaaaagacagcaaggttgtggagattgttgatgagaaagttcgtaggagggaggaacca
gaaaagtggcctcttcctggtcccccaatagtggattattcacagactgatttctcccag
cttctcaactgccctgagtttgtcccccgacagcactaccaaaaggagacagagtcggca
cctggctctcctcgtgcagtcaccccagtgtcaaccaaaacagaagaggtcagcaaccta
aagacactacccaagggcctgtctgccagcctacctgacctggattccgagaactggatt
gaagtgaagaagaggcctcggccgtccccagcacggcccaagctgccctcccagcagctg
atgtccaaggatcaggatgagcaagaggaactggatttcctgtttgatgaggagatggag
cagatggatgggcggaagaacacctttactgcctggtctgatgaggaatctgactatgag
attgatgacagggatgtcaacaagatcctcattgtcacccagacaccacattacatgcgc
cggcacccaggaggggaccgcacaggcaaccacacctcccgtgccaagatgagcgctgag
ctggccaaggtcattaatgatggcctcttctactatgagcaggacctgtgggctgagaag
tttgaacctgagtattcccagatcaagcaagaggttgagaacttcaaaaaagtcaatatg
atcagccgggagcagtttgacacactgacccctgagccccctgtggatcccaaccaggaa
gttcctcctgggccacctcggttccagcaagttcccacagatgccctggccaacaagttg
tttggtgctcctgaaccctccaccatcgcccgctctctaccaaccactgtcccagagtca
ccaaactaccgcaacaccaggacaccccgcactccccggacaccacagctcaaagactca
agccagacatcacggttttacccagtggtgaaagaaggacggacactggatgccaagatg
cctcgaaaaagaaagacaagacacagttcaaacccaccgttggagagccatgtcggctgg
gtgatggattcccgtgagcacaggccccgtactgcttccatcagctccagcccctcagaa
gggacacctacagttggcagctatggctgtactccccagtcattgcccaagttccagcat
ccttcccatgaactgctcaaggaaaatggcttcacacaacacgtctaccataagtatcgt
aggcgctgccttaatgagcggaaacgcttgggcattggccagtctcaggagatgaacaca
ctcttccgcttctggtccttcttcctccgagatcacttcaataaaaagatgtatgaggag
ttcaagcagctggctctggaggatgccaaagaaggctacagatatggtttggagtgcctt
tttcgatactacagttatggcctggaaaagaagttccggctggacatattcaaagatttt
caggaggaaacggtgaaggactatgaagctggccaactatatgggctggagaagttctgg
gccttcttgaaatattccaaagccaaaaacttggacattgaccccaaactgcaagaatac
ctcggcaaattccgacgtcttgaagacttccgagtagatccccccatgggtgaggagggc
aaccacaagcgacactcagtggtagcaggaggtggcggtggtgagggcaggaagcggtgc
ccttctcagtcttccagcaggcctgtcgccatgatcagccaaccccctacaccacccacc
ggccagcccgtccgggaagatgccaaatggacaagccagcactcgaacacacagactttg
ggaaagtga

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