Callithrix jacchus (white-tufted-ear marmoset): 100394148
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Entry
100394148 CDS
T03264
Symbol
TNFRSF1B
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1B isoform X1
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04060
Cytokine-cytokine receptor interaction
cjc04061
Viral protein interaction with cytokine and cytokine receptor
cjc04668
TNF signaling pathway
cjc04920
Adipocytokine signaling pathway
cjc05014
Amyotrophic lateral sclerosis
cjc05022
Pathways of neurodegeneration - multiple diseases
cjc05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
100394148 (TNFRSF1B)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100394148 (TNFRSF1B)
04061 Viral protein interaction with cytokine and cytokine receptor
100394148 (TNFRSF1B)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
100394148 (TNFRSF1B)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100394148 (TNFRSF1B)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100394148 (TNFRSF1B)
05022 Pathways of neurodegeneration - multiple diseases
100394148 (TNFRSF1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cjc04050
]
100394148 (TNFRSF1B)
04090 CD molecules [BR:
cjc04090
]
100394148 (TNFRSF1B)
Cytokine receptors [BR:
cjc04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
100394148 (TNFRSF1B)
CD molecules [BR:
cjc04090
]
Proteins
100394148 (TNFRSF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
100394148
NCBI-ProteinID:
XP_035163663
Ensembl:
ENSCJAG00000013571
LinkDB
All DBs
Position
7:47138369..47180742
Genome browser
AA seq
463 aa
AA seq
DB search
MAPAAVWAALAVGLQLWAAGHTLPTKVTFTPYTPKPGSTCQINEYYHQTAQRCCSQCPAG
QHAKVFCTRTSDTVCDFCENSTYTELWNWLPECLSCGSPCSSDQVETQACTQQQNRICTC
MPGWYCALGKQEGCRLCSPLRKCGPGFGVAKPGTERSDVVCKPCAPGTFSSTTSSTDICR
PHQRCNLVAIPGNASMDAVCLSESLTQSTAPGPAYPPQPVSTQSPNTKPTPGPSTAPSTS
FLLPMGPSPPAKGSTGDISLSVGPIVGVTVLGLLIIGVVNCVIMTQVKKKPSCLQREAKV
PHLPSDKARGAQGPEQQHLLTTAPSSSSSSLESSASASDRRVPTQNQPEAEGVGKASGAG
EFRASTGSSADSPPGGHGTQVNVTCIVNVCSGSDHSSQCSSQASTTTGYTDASPSGSPKD
EKVPFSKEECAFQSRLETPETLLQNTGEKPLPLGVPDAGMKSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgccgccgtctgggcagcgctggccgtcggactgcagctctgggccgcggga
cacaccttgcccaccaaggtgacatttacaccctacaccccaaagcccgggagcacgtgc
cagatcaacgaatactatcaccagacagctcagaggtgctgcagccagtgtccagcgggc
caacatgcaaaagtcttctgtaccaggacttcagacactgtgtgtgacttctgtgagaac
agcacatacaccgagctctggaactggcttcctgagtgcttgagctgcggctctccctgt
agctctgaccaggtggaaactcaagcctgcactcagcaacaaaaccgcatctgcacctgc
atgcccggctggtactgcgcgctgggcaagcaggaggggtgccggctgtgctcaccgctg
cgcaagtgtggcccgggcttcggcgtagccaaaccaggaactgaaagatcagacgtggtg
tgcaagccgtgtgccccaggaacgttctccagcacgacttcatccacagatatttgcagg
ccccaccagagatgtaacctggtggccatccctgggaatgcaagcatggatgcagtatgc
ctgtcggagtccctcacccagagcacggccccaggcccagcatacccaccgcagccagtg
tccacacaatccccgaacacgaagccaactccagggcccagtacggctccaagcacctcc
ttcctgctgccgatgggccccagccccccagctaaagggagcactggcgacatctctctt
tcagttggaccgatcgtgggtgtgacagtcttgggtctactaataataggtgtggtgaac
tgtgtcatcatgacccaggtgaaaaagaagccctcctgcctgcagagagaagccaaggtg
cctcacctgccttctgataaggcccggggtgcccagggccctgagcagcagcacctgctg
accacagcgccgagctccagcagcagttccctggagagctcagccagtgcttcggacagg
agggtgcctacccaaaaccagccagaggcagaaggcgtggggaaggccagcggagccggg
gagttccgggccagcaccgggagctcagcagattctccccctgggggccatgggacccag
gtcaatgtcacctgcatcgtgaacgtctgtagcggttccgaccacagctcacagtgctcc
tcccaggccagcaccacaacggggtacacagatgccagcccctcgggctccccaaaggat
gagaaggtccccttctccaaggaagagtgcgcctttcagtctcggctggagacaccagag
accctgctgcagaacaccggagagaagcccctgccccttggcgtgcccgatgcggggatg
aagtccagttaa
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