Callithrix jacchus (white-tufted-ear marmoset): 100395500
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Entry
100395500 CDS
T03264
Symbol
ACIN1
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
cjc03015
mRNA surveillance pathway
cjc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100395500 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
100395500 (ACIN1)
03015 mRNA surveillance pathway
100395500 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100395500 (ACIN1)
03041 Spliceosome [BR:
cjc03041
]
100395500 (ACIN1)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100395500 (ACIN1)
Spliceosome [BR:
cjc03041
]
Complex C
Other components
EJC/TREX
100395500 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
100395500
NCBI-ProteinID:
XP_002807253
Ensembl:
ENSCJAG00000008076
LinkDB
All DBs
Position
10:complement(53248116..53284188)
Genome browser
AA seq
1345 aa
AA seq
DB search
MWRRKYPSTSGGTREVLSGNRGXEYGSGRGHPGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSSSVSEEKGDSDDEKPRKGERRSSRVRQARAAKLS
EGSQPAEEEEDQETPSRNLRVRADRSLKTEEEEEEEEEEEEDEEEEDDDEGQKSREAPIL
KELKEEEGEEMPRVKPEEMMDERPKTIRSQEQEVLERGGRVTRSQEEARKSHLARQQQEK
EMKTSPPEEEEREIKSSQGLKEKSKSPSPPRLTEDLKKAPLVVQPEQTASEEETPPPLLT
KEASSPPPHTQLHSEEEVEPMEGPAPPILIQLSPPNTDAETRELLVSRHTVQLVGGLSPL
SSPADTKAESPTEKVPEESVLPLAQKSTLSDYSTQKGLEPESDKSAQPLPLKIEELALAK
GFTEESLKQPSFEQKEGRRASHTLLPGHRLKQSADSSSSRSSSSSSSSSRSRSRSPDSSG
SQSHSPLRSKQRDVAQARTHANPRGTPKMGSRSTSESRSRSHSRSRSRSASSNSRKSLSP
GVSRDSSTSYTETKDPSSGQEVATPPVPQLQVLEPKERTSSSSSSVQARRLSQPEPAEKH
MTQRLQPEQGSPKKCEAEEAEPPAATQPQTSETQTSHLPVSESERIHHTVEEKEEVTMDT
SENRPENDVPEPPMPIADQVSNDDRPEGSAEDEEKKESSLPKSFKRKISVVSATKGVPAG
NSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSR
ISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPVPPQVSV
EVALPPPAEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHI
SNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQ
SNPKFLCADYAEQDELDYHRGLLVDRPSETKTEDQGIPRPLHPPPPPPVQPPQHPRAEQR
EQERAVREQWAEREREMERRERTRSEREWDRDKVREEPRSRSRSRDRRRKERAKSKEKKS
EKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQE
EEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRER
DRRDTKRHSRSRSRSTPVRDRGGRR
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggaaatatccgagcacatccggaggaacccgggaagttctgagtggtaat
cgagggntagagtacggcagtgggcggggtcaccccggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacagaaacactcaacaccccatgctgca
ttccagccaaattcccagattggtgaggaaatgagccagaacagtttcataaaacagtat
ctggaaaagcagcaggagctacttaggcagcgtctggaacgtgaagctcgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcgcccagaaaaagttcctcagtttctgaagagaaaggtgactctgatgatgagaaa
ccaaggaaaggagaaagacgatcatctagggtcagacaggcaagagcagctaaactctct
gagggcagccagcctgctgaggaggaagaggatcaagaaacaccttccagaaacttaagg
gtcagagcagatcgaagtttgaaaacagaagaggaagaagaggaggaggaggaggaagaa
gaagatgaagaggaggaagatgatgatgagggacaaaaatctagggaggcaccaatcctg
aaagagcttaaggaagaggagggggaagagatgcccagagtaaaaccagaggagatgatg
gatgagagacccaaaacaataagatcacaggaacaggaggtgttagagagaggagggaga
gttacaagatcccaggaagaggctagaaaaagccatttggctagacagcagcaggagaaa
gaaatgaaaacatctccccctgaggaggaagaaagagaaataaaatcttcacaaggctta
aaggaaaaatcaaagtccccttcccctcctcgactgactgaagatctaaagaaggcccca
cttgtagtgcagccagagcaaactgccagcgaggaagagactcctccacctttacttacc
aaggaagcatcttctccaccacctcatacacaactccatagcgaagaagaagtagagcct
atggaaggcccagccccccctatcctcattcaattatctcctcctaatacagatgctgag
actagggagctattagtatctcggcatactgtccagttggtaggaggcctgtctcctttg
tcaagtcctgcagacaccaaagcagaatctccaacagagaaagtgccagaggagagtgtc
ctccctctggctcagaaaagcacactgtctgactactcgacccagaagggtcttgaacct
gagtcagacaaatctgctcagccactccctctgaaaattgaagagttagcactggccaaa
ggattcactgaagaatctctcaaacagccatcttttgaacagaaggaaggcagaagagct
tctcatacccttctcccaggccacagattgaaacagtcagctgattcatcctctagccgg
tcttcctcatcttcctcttccagttctagatcaagatctcgctctcctgacagttcaggt
tctcagtctcattcacctctcagatccaagcagagagatgtagcccaggcacgtactcat
gccaaccctcgtggtacacccaagatgggctccagatcaacatcagagtccaggtcacgt
tcacattcacgttctcgttctcgttcagcatcaagcaacagcagaaaatctctgagccct
ggagtctccagggacagcagcaccagctatactgaaaccaaagatccctcttctggtcag
gaggttgcaactccaccagtgccacaactgcaggtccttgagccaaaggagaggacttcg
tcctcctcatcctctgtccaagcaaggcgtctgagtcagcctgagccagctgaaaagcat
atgacccagaggttacagcctgagcaggggagcccaaagaagtgtgaagctgaagaggca
gagccaccagctgccacacagccccaaacctcagagactcagacctctcatctcccagta
tcagaatcagaaaggattcatcacactgttgaggagaaggaggaagtgaccatggacaca
agtgaaaacagacctgaaaatgatgttccagaacctcccatgcccattgcagaccaagtc
agcaatgatgaccgcccagagggcagtgctgaagatgaggagaagaaagagagctcgctg
cccaaatcattcaagaggaagatctccgttgtctcagctaccaagggggtgccagctgga
aacagtgacacagaggggggccagcctggtcggaaacgacgttggggagccagcacagcc
accacacagaagaaaccttccatcagtatcaccactgaatcactcaagagcctcatcccc
gacatcaaacccctggcggggcaggaggctgttgtggatcttcatgctgatgactctcgc
atctctgaggatgagacagagcgtaatggcgatgatgggacccatgacaaggggctgaaa
atatgccggacggtcactcaggtagtacctgcagagggccaggagaatgggcagagggaa
gaagaagaagaagagaaggaacctgaagcagaacctcctgtgcctccccaggtgtcagta
gaggtggccttgcccccacctgcagagcatgaagtaaagaaagtgactttaggagatacc
ttaactcgacgttccattagccagcagaagtctggagtttccattaccattgatgaccca
gtccgaactgcccaggtgccctccccaccccggggcaagattagcaacattgtccatatc
tccaatttggtccgtcctttcactttaggccagctaaaggagttgttggggcgcacagga
accttggtggaagaggccttctggattgacaaaatcaaatctcattgctttgtaacgtac
tcaacagtagaggaagctgttgccactcgaacagctctgcatggggtcaaatggccccag
tccaatcccaaattcctttgtgctgactatgctgagcaagatgagctggattatcaccga
ggcctcttggtggaccgtccctctgaaactaagacagaggatcagggaataccacggccc
ctgcacccgccacccccacccccggtccagccaccacagcacccgcgggcagagcagcgg
gagcaggagcgggcagttcgggaacagtgggcagagcgggaacgggaaatggagcggcgg
gagcggactcgatcagagcgagaatgggatcgggacaaagttcgagaagagccccgttcc
cgatcaaggtcccgtgaccgccgccgcaaggaacgtgcaaagtctaaagaaaagaagagt
gagaagaaagagaaagcccaggaggaaccacctgccaagctgctggacgaccttttccga
aagaccaaggcagctccctgcatctattggctcccactgactgacagccagatcgttcag
aaggaggcagagcgggctgaacgggccaaggagcgggagaaacggcgaaaggagcaagaa
gaagaagagcaaaaggagcgggagaaggaagccgagcgggaacggaaccgacagctggag
cgagaaaaacgtcgggagcacagtcgggagagggaccgggagagagagagagaaagggag
agggacaggggggacagagatcgggatagggaaagggaccgagaacgaggcagggaaagg
gatcgcagggacaccaagcgacatagcagaagccggagtcggagcacacctgtgcgggac
cggggtgggcgccgctag
DBGET
integrated database retrieval system
