Callithrix jacchus (white-tufted-ear marmoset): 100401002
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Entry
100401002 CDS
T03264
Symbol
TRIM47
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47
KO
K12023
tripartite motif-containing protein 47
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100401002 (TRIM47)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100401002 (TRIM47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
PRY
zf-C3HC4_2
zf-RING_5
zf-RING_2
SPRY
zf-rbx1
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100401002
NCBI-ProteinID:
XP_035157679
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All DBs
Position
5:complement(127862972..127867671)
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AA seq
638 aa
AA seq
DB search
MDGSGPFSCPICLEPLREPVTLPCGHNFCLTCLGALWPHRGAAGAGGPGGAARCPLCQEP
FPDGLQLRKNHTLSELLQLRQGSGPGPGPGPATAPALEPSAPSAPPSAPEPSAPCAPEPW
PEGEEPVRCDACPEGAALPAALSCLSCLASFCPAHLGPHERSPALRGHRLVPPLRRLEES
LCPRHLRPLERYCRAERVCLCEACAAQEHRGHELVPLEQERALQEAEQPKVLSAVEDRMD
ELGAGIAQSRRTVALIKSAAVAERERVSRLFAEAAATLQGFQTEVLSFIEEGEAAMLGRS
QGDLRRQEEQRSRLSRARQNLSQVPEADSVSFLQELLALRLALEEGCGPGPGPPRELSFT
KSSQAVRAVRDVLTAACASQWEQLRGPGGNEDGPQKLDSEADAEPQDPDSTNLLESEAAR
DYFLKFAYIVDLDSDTADKFLQLFGTKGVKRVLCPINYPESPTRFTHCEQVLGEGALDRG
TYYWEVEIIEGWVSVGVMAEDFSPQEPYDRGRLGRNAHSCCLQWNGRSFSVWFYGLEAPL
PHPFSPTVGVCLEYADRALAFYAVRDGKMNLLRRLKASRTRRVGVPASPIDPFQSRLDSH
FASLFTHRLKPAFFLESVDAHLQIGPLKKSCISVLKRR
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggacggcagcgggccattcagctgccccatctgcctggagccgctccgggagccggtg
acgctgccctgcggccacaacttctgccttacctgcctgggcgctctctggccgcatcgt
ggcgccgctggagccggcggacccggaggcgcggcccgctgcccgctgtgccaggagccc
ttccctgacggcctgcagctccgcaagaaccacacgctgtccgagctgctgcagctccgc
cagggctcgggcccagggcccggccccggcccggccaccgccccggccctggagccctcg
gcgcccagcgcgccacccagcgcccctgagccgtcggctccctgcgctccggaaccgtgg
ccggagggcgaagagccggtgcgctgcgacgcgtgccccgagggcgcggccctacccgcc
gcgctgtcctgcctctcctgcctcgcctccttctgccctgcgcacctgggcccgcacgag
cgcagccctgcgctccgcggacaccgcctggtgccgccgctgcgccggctggaagagagc
ctgtgcccgcgccacctgcggccgctcgagcgctattgccgcgcggagcgcgtgtgcctg
tgcgaggcctgcgctgcccaggagcaccggggtcacgagctggtgccgctggagcaggag
cgcgcgcttcaggaggccgagcagcccaaagtcctgagcgccgtggaggaccgcatggat
gagctgggtgctggcattgcacagtccaggcgcacggtggccctcatcaagagtgcagcc
gtggcggagcgggagagggtgagccggctatttgcagaggctgcagccaccctgcagggc
ttccagaccgaggtgctgagcttcatcgaagaaggggaagctgccatgctgggtcgctcc
cagggcgacctgcggcgacaggaggaacagcgcagccgcctgagccgagcccgccagaac
ctcagccaggtccccgaagccgactcagtcagcttcctacaggagctgctggcgctaagg
ctggccctggaggaggggtgtggccctggacctggccccccgagggagctcagcttcacc
aaatcatcccaagctgtccgtgcagtgagagacgtgctgaccgcggcctgcgctagccag
tgggagcagctgagggggccgggcggcaatgaggacgggccacagaaattagactcggaa
gctgatgctgagcctcaggaccccgatagcaccaacctcttggagagtgaagctgccagg
gactatttcctcaagtttgcctacattgtggatttggacagtgacacagcagacaagttc
ctgcagctgtttggaaccaaaggtgtcaagagggtgctatgtcccatcaactaccccgag
tcacccacccgcttcacccattgtgagcaggtgctgggcgagggcgccctggaccggggc
acctactactgggaggtggaaattatagaggggtgggtcagcgtgggggtcatggctgaa
gacttctccccgcaagagccctatgaccgcggccgcctgggccgcaacgcccactcctgc
tgcctgcagtggaatggacgcagcttctccgtctggttttatgggctggaggcgcccctg
ccgcaccccttctcgcccacggtcggggtctgcctggaatacgccgaccgtgccctggcc
ttctatgctgtgcgggacggcaagatgaacctcctgcgaaggctgaaggcctcccggacc
cgccgagttggcgtccctgcctcccccatcgaccccttccaaagccgcctggacagtcac
tttgcgagcctcttcacacacaggctcaagcctgccttcttcctggagagcgtggatgca
cacctgcagatcgggccgctcaagaagtcttgcatatccgtgctgaagaggaggtga
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integrated database retrieval system
