Callithrix jacchus (white-tufted-ear marmoset): 100405253
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Entry
100405253 CDS
T03264
Symbol
USP40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjc01002
]
100405253 (USP40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100405253 (USP40)
Enzymes [BR:
cjc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100405253 (USP40)
Peptidases and inhibitors [BR:
cjc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100405253 (USP40)
Ubiquitin system [BR:
cjc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100405253 (USP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
100405253
NCBI-ProteinID:
XP_008997967
Ensembl:
ENSCJAG00000014074
LinkDB
All DBs
Position
6:complement(151301765..151391169)
Genome browser
AA seq
1236 aa
AA seq
DB search
MFGNLFEEDYSTVSNNQYGKGKKLKTKVLEPPAPREFTNLSGIRNQGGTCYLNSLLQTLH
FTPEFREALFSLGPEELGLFEDKDKPDAKIRIIPLQLQRLFAQLLLLDQEAASTTDLTDS
FGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDLINRLYHGTIVNQIVCKECKNVSE
RQEDFLDLTVAVKNVSGLEDALWNMYVEEEVFDCDNLYHCGTCDRLVKAAKSAKLRKLPP
FLTVSLLRFNFDFVKCERYKETSCYTFPLRINLKPFCEQSELDDLEYTYDLFSVIIHKGG
CYGGHYHVYIKDVDHLGNWQFQEEKSKPDVNLKDPQNEEEIDHPLMILKAILLQEENNLI
PVDQLGQKLLKKIGISWNKKYRKQHGPLRKFLQLHSQIFLLSSDESTVRLLKNGSLQAET
DFQSNDQQIFKTPPPESPGLNNSISCPHWFDINDSKVQPIREKDIEQQFQGKESAYMLFY
RKSQLQRPPEARANPRYGVPCHLLNEMDAANLELQTKRVECDSANNTFELHLHLGPQYHF
FNGALHPVVSQTESVWDLTFDKRKTLGDLRQSIFQLLEFWEGDMVLSVAKLVPAGLHIYQ
ILDGDELTLCETEIADGEDIFVWNGVEVGGVHIQTGIDCEPLLLNVLHLDTSSEGEKCRQ
VIESPHVFPSNAEVGSVLTALAIPAGVIFINSAGCPGRESWTAIPKEDMRKTFREQGLKN
GSSILIRDSHDDNSLLTKEEKWVTTMNEIDWLHVKNLCQLESEEKQVKISATANTVVFDI
RIKAIKELKLMKELADNSCLRPIDRNGKLLCPVPDSYTLKEAELKMGSSLGLCLGKAPSS
SQLFLFFAMGNNVQPGTEMEIIVEETVSVRDCLKLMLEKSGLQGDAWHLRKMDWCYEAGE
PLCEEDATLKELLICSGDTLLLIEGQLPPPGFLKVPIWWYQLQDPSGHWESHQDQTNCTS
SWGRVWRAASSQGAPGNEPEEVSLLYLGDIEISEDATLAELKSQALTLSPFLEFGVLSPA
HLRAWTVERKCPGRLLRTDRQPLRECKLGRRTEICLEHLQKGEDLGPQDMLLRTQMRIPS
ERTYTPALDLVWDTAQGRTPGSLRQRVADFYCLPVEKIEIAKYFPEKFEWLPISSWNQQI
TKRKKKKKQDCLQGAPYYLKDGDTIGVKNLLVDNDDDFSTIRDDIGKEKQKQLALEKRKS
REALHEQSSYILSSAETPARPRAPEASLSIHVGSFR
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggaacctatttgaggaggattattccactgtgtctaataatcagtatggaaaa
gggaagaaattaaagactaaagttctggagccacctgctcctagagaatttaccaattta
agcggaatcagaaatcagggtggaacctgttacctcaattcccttcttcagactcttcat
ttcacacctgaattcagagaagctttattttctcttggcccagaagagcttggtttgttt
gaagataaggataaacctgatgcaaagattcgaatcatccctttacagttacaacgcttg
tttgctcagcttctgcttttagaccaggaagctgcatccacaacagacctcactgacagc
tttgggtggaccagcaatgaggaaatgaggcaacatgatgtgcaggaactgaatcgaatt
ctcttcagcgctttggaaacttctttagtcgggacctccggtcatgaccttatcaatcgt
ctgtatcacggaaccattgttaaccagattgtttgtaaagaatgtaagaatgtcagtgag
aggcaggaagacttcttagatctaacagtagcagtcaaaaatgtatctggtttggaagat
gctctctggaacatgtatgtagaagaggaagtttttgattgtgacaacttgtaccactgt
ggaacttgtgacaggctggttaaagcagcaaagtcggccaaattacgtaagctgcctcct
tttcttactgtttcattgctaagatttaattttgattttgtgaaatgtgaacgctacaag
gaaactagctgttatacattccctctccggatcaatctcaagcccttttgtgaacagagt
gaattggatgacttagaatatacatatgacctcttctcagttattatacacaaaggcggc
tgctacggaggccattaccatgtatatattaaagacgttgatcatttgggaaactggcaa
tttcaagaggaaaaaagtaagccagatgtgaatctgaaagatccccagaatgaagaagag
attgatcatcctctgatgattctgaaagcaatcttattacaggaggagaataatctaatt
cctgttgatcagctgggccagaaactcttgaaaaagataggaatatcttggaacaagaag
tacagaaagcagcatggaccactgcgaaagttcttacagctccattctcagatatttcta
ctcagttcagatgaaagtacagttcgtctcttgaagaatggttctctccaagctgagact
gatttccaaagtaatgaccagcaaattttcaagacgcctcctccagaatccccaggttta
aacaatagcatctcctgtccccactggtttgatataaatgattctaaagtccagccaatc
agggaaaaggatattgaacagcaatttcaaggtaaagaaagtgcctacatgttgttttat
cggaaatcccagttgcagagacccccggaagctcgagctaatccaagatacggggttcca
tgtcatttactgaatgaaatggatgcagctaaccttgaactgcaaacaaaaagggtagaa
tgtgattctgcaaacaatacttttgaattgcatcttcacctgggccctcagtatcatttc
ttcaatggggctctgcacccagtagtttctcaaacagaaagcgtgtgggatttgaccttt
gataaaagaaaaactttaggagatctccggcagtccatatttcagctgttagaattttgg
gaaggagacatggttcttagtgttgcaaagcttgtaccagcgggacttcacatttaccag
atacttgacggggatgaactgacactgtgtgaaactgaaattgctgatggggaagacatc
tttgtgtggaatggggtagaggttggtggagtccacattcaaactggtattgactgcgaa
cctctgcttttaaatgttcttcatctagacacaagcagtgaaggagaaaagtgtcggcag
gtgatagaatctccacatgtctttccatctaatgcagaagtgggcagtgtcctcacagcc
ttagcaatcccagcaggtgtcatcttcatcaacagtgctggatgtccaggtagggagagt
tggacggccatccccaaggaagacatgaggaagacgttcagggagcaagggctcaaaaat
ggaagctccattttaattcgggattctcatgatgataacagcttgttgaccaaggaagag
aaatgggtcactactatgaatgagattgactggctccatgttaaaaatttatgccagtta
gaatctgaagagaagcaggttaaaatatcagcaactgctaatacagtggtgtttgatatt
cgaattaaagccataaaggaattaaaattaatgaaggaactagctgacaacagctgtttg
agacctattgatagaaatgggaagcttctttgtccagtgccagacagctatactttgaag
gaagcagaattgaagatgggaagttcattgggactatgtcttggaaaggcaccaagttcc
tctcagttgttcctgttttttgcaatggggaataatgttcaacctgggacagaaatggaa
attatagtagaagaaacagtatctgtgagagattgtttaaagttaatgctggagaaatct
ggcctgcaaggagatgcctggcatttacgaaaaatggattggtgctatgaagctggggag
cctttatgtgaagaagatgcaacactgaaagaacttctgatatgttctggagatactttg
cttttaattgaaggacaacttcctcctccgggtttcctgaaggtacccatctggtggtac
cagcttcaggatccctcaggacactgggagagtcatcaggaccagaccaactgtacttcc
tcttggggcagagtatggagagccgcttccagccaaggtgctcctgggaacgagcctgag
gaagtttctctcctctacttgggagacatcgagatctcagaagatgccacgctggcggag
ctgaaatctcaggctttgaccttgtcccctttcctggagttcggtgtcctgtccccagcc
cacctcagagcctggacggtggagaggaagtgcccaggcagacttttacgaactgaccgg
cagccgctcagggaatgtaagctagggcggagaactgagatctgcttagagcaccttcag
aaaggagaagacctgggcccacaggacatgctgctgaggacacagatgcgcatccccagc
gagaggacctatacccctgctctggacctggtgtgggacacggcccagggcaggactcct
ggctccctgaggcagagggttgctgatttctattgtcttcctgtggagaagattgaaatt
gccaaatactttcctgaaaagtttgagtggcttccgatatccagctggaaccaacaaata
accaagaggaaaaagaagaaaaaacaagattgtttgcaaggggcaccatactacttgaaa
gacggagatactattggtgttaagaatctcctggttgataatgatgacgatttcagtaca
atcagagatgacattggaaaagaaaagcagaaacagctggctctggagaagaggaaaagc
cgagaagccctccatgaacagagcagctacatcctctccagtgcagagacgcctgcccgg
ccccgagccccagaagcttctctctccatccacgtggggagtttcagatag
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integrated database retrieval system
