Callithrix jacchus (white-tufted-ear marmoset): 100406377
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Entry
100406377 CDS
T03264
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04510
Focal adhesion
cjc04520
Adherens junction
cjc04530
Tight junction
cjc04670
Leukocyte transendothelial migration
cjc04810
Regulation of actin cytoskeleton
cjc05146
Amoebiasis
cjc05203
Viral carcinogenesis
cjc05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100406377 (ACTN1)
04520 Adherens junction
100406377 (ACTN1)
04530 Tight junction
100406377 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100406377 (ACTN1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100406377 (ACTN1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100406377 (ACTN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
100406377 (ACTN1)
09163 Immune disease
05322 Systemic lupus erythematosus
100406377 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100406377 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cjc04812
]
100406377 (ACTN1)
04147 Exosome [BR:
cjc04147
]
100406377 (ACTN1)
Membrane trafficking [BR:
cjc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100406377 (ACTN1)
Cytoskeleton proteins [BR:
cjc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100406377 (ACTN1)
Exosome [BR:
cjc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100406377 (ACTN1)
Exosomal proteins of colorectal cancer cells
100406377 (ACTN1)
Exosomal proteins of bladder cancer cells
100406377 (ACTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_8
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
XisI
Uds1
Motif
Other DBs
NCBI-GeneID:
100406377
NCBI-ProteinID:
XP_035116696
Ensembl:
ENSCJAG00000015020
LinkDB
All DBs
Position
10:complement(99758795..99868258)
Genome browser
AA seq
914 aa
AA seq
DB search
MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
VPENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRM
VSDINNAWGCLEQVEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI
NGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDPQKKTGMMDTDDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSR
ETADTDTADQVMASFKILAGDKNYITVEELRRELPPDQAEYCIARMAPYTGPDSVPGALD
YMSFSTALYGESDL
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggaccattatgattctcagcaaaccaacgactacatgcagcccgaagaggactgggac
cgggacctgctcctggaccccgcctgggagaagcagcagagaaagacattcacggcatgg
tgcaactcccacctccggaaggcagggacacagatcgagaacatcgaagaggacttccgg
gatggcctgaagctcatgctgctgctggaggtcatctcaggcgaacgcttggccaagcca
gagcgaggcaagatgagggtgcacaagatctccaatgtcaacaaggccctggatttcata
gcaagcaaaggcgtcaagctggtgtccattggagccgaagaaatcgtggatgggaatgtg
aagatgaccctgggcatgatctggaccatcattctgcgctttgccatccaggacatctct
gtggaagagacttcagccaaggaagggctgctcttgtggtgtcagagaaagacagctcct
tacaaaaacgtcaacatccagaacttccacataagctggaaggatggccttggcttctgt
gccttgatccaccgacaccggcctgagctgattgactatgggaagctgcggaaggatgat
ccgctcacaaatctgaacacggcttttgacgtggcagagaaatacctggacatccccaag
atgctggatgccgaagacatcgttggaactgcccgaccggatgagaaagccatcatgact
tatgtgtctagcttctaccacgccttctctggagcccagaaggcggagacagcagccaat
cgcatctgcaaggtgttggccgtcaaccaggagaacgagcagcttatggaagactacgag
aagctggccagtgatctgttggagtggatccgccgtaccatcccgtggctggagaaccgg
gtgcctgagaacaccatgcacgccatgcagcaaaagctggaggacttccgggactaccgg
cgcttgcacaagcctcccaaggtgcaagagaagtgccagctggagatcaacttcaacaca
ctgcagaccaagctgcggctcagcaaccggcctgccttcatgccctccgagggcaggatg
gtctcggatatcaacaatgcctggggctgcctggagcaggtggagaagggctatgaggag
tggctgctgaacgagatccggaggctggagcgactggaccacctggcagagaagttccgg
cagaaggcctccatccacgaggcctggacggacggcaaagaggccatgctgcgacagaag
gactatgagacggccacgctctcggaaatcaaggccctgctcaagaagcacgaggccttt
gagagtgacctggctgcccaccaggaccgcgtagagcagatcgccgccatcgcacaggag
ctcaatgagctggactattatgactcacccagtgtcaacgcccgttgccaaaagatctgt
gaccagtgggacaatctgggggccctaactcagaagcgaagggaagctctggagcggacc
gagaagctgctggagaccattgaccagctgtacttggagtatgccaagcgggccgcaccc
ttcaacaactggatggagggggccatggaggacctgcaggacaccttcattgtgcacacc
atcgaggagatccagggactgaccacagcccatgagcaattcaaggctaccctccccgat
gccgacaaggaacgcctggccatcctgggcatccacaacgaggtgtccaagattgtccag
acctaccatgtcaatatggcgggcaccaacccctacacaaccatcacgcctcaggagatc
aatggcaaatgggaccacgtgcggcagctggtgcctcggagggaccaggctctgacagag
gagcacgcccgccagcagcacaatgagaggctacgcaagcagttcggggcccaggccaat
gtcatcgggccctggatccagaccaagatggaggagatcgggaggatctccattgagatg
cacgggaccctggaggaccagctcagccacctgcggcagtatgagaagagcatcgtcaac
tacaagccaaagattgatcagctggagggcgaccaccagctcatccaggaggcgctcatc
ttcgacaacaagcacaccaactacaccatggagcacatccgtgtgggctgggagcagctg
ctcaccaccatcgccaggaccatcaatgaggtggagaatcagatcctgacccgggatgcc
aagggcatcagccaggagcagatgaatgagttccgggcctccttcaaccactttgaccgg
gatcactccggcacactgggtcccgaggagttcaaagcctgcctcatcagcttgggttat
gatattggcaacgacccccagaagaagacaggcatgatggacacggatgatttccgcgcc
tgcctgatctccatgggttacaacatgggagaagccgaatttgcccgcatcatgagcatt
gtggaccccaaccgcctgggggtagtgacattccaggccttcatcgacttcatgtcccgt
gagacagccgatacagatacagcagaccaagtcatggcctccttcaagatcctggctggg
gacaagaactacattaccgtggaggagctgcgtcgtgagctgccacccgaccaggccgag
tactgcattgcgcggatggccccctacaccggccccgactccgtgccgggtgctctggac
tacatgtccttctccacggcactgtatggcgagagtgacctctaa
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integrated database retrieval system
