Callithrix jacchus (white-tufted-ear marmoset): 100410443
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Entry
100410443 CDS
T03264
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04080
Neuroactive ligand-receptor interaction
cjc04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100410443 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
100410443 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjc04040
]
100410443 (TRPV1)
Ion channels [BR:
cjc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100410443 (TRPV1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
100410443
NCBI-ProteinID:
XP_035155344
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Position
5:complement(63195653..63239227)
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AA seq
857 aa
AA seq
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MQVWPALAAHGAAEDPTRMKKQSSTDSGVAAAPLQQDACPDAPDGDPNPGPPPTKPHLST
ARSFAWLLGKGNSEEAYPAGCPHEEGELASCPTITVSPVITIQRTGDGPTCARQLSQDSV
AAGTEKTLRLYDRRSIFEAVAQNNCQELESLLLFLQKSKKHLTDSEFKDPETGKTCLLKA
MLNLHSGQNDTIPLLLEIARQTDSLKEFVNASYTDSYYRGQTALHIAIERRNMALVTLLV
ENGADVQAAANGEFFKKTKGRPGFYFGELPLSLAACTNQLGIVKFLLQNSWQPADIGARD
SVGNTVLHALVEVADNTADNTKFVTSMYNELLILGARLHPTLKLEELTNKKGMTPLALAA
GTGKIGVLAYILQREMQEPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAY
SSSETPNRHDMLLVEPLNRLLQDKWDRFVKRIFYFNFFIYCLYMIIFTMAAYYRPVVGLP
PFKMENTEDYFRVTGEILSVLGGVYFFFRGIQYFLQRRPSLKTLFVDSYSEMLFFVQSLL
MLATVVLYFSHCKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMF
VYIVFLFGFSTAVVTLIEDGKNNSLPNESTSHRWRGPGCRPPDNSYNSLYSTCLELFKFT
IGMGDLEFTENYDFKAVFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQR
AITILDTEKSFLKCMRKAFRSGKLLQVGYTPEGQDDYRWCFRVDEVNWTTWNTNVGIINE
DPGNCEGVKRMPSFSLRSSRVSGRHWKNFALVPLLREASARDRHSAQPEEVHLQQFSGSL
KPEDAEVFKNPIASGEK
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtctggccggctctggctgcacacggggccgcagaggatcccacaaggatgaag
aaacagagcagcacagactcaggggtggccgcggccccactccagcaggacgcctgccca
gatgccccagatggagaccccaaccctgggccacccccaaccaagccccacctctccacg
gccaggagcttcgcctggctccttgggaagggcaactcagaggaggcttacccagcgggt
tgcccccatgaggaaggtgagctggcctcctgtcccaccatcacagtcagccctgtcatc
accatccagagaaccggggatggccccacctgtgctaggcagctgtcccaggactctgtc
gctgccggcactgagaagaccctcaggctctatgatcgcaggagtatcttcgaagccgtg
gctcagaacaactgccaggagctggagagcctgctgctgttcctgcagaagagcaagaag
cacctcacggacagcgagttcaaagacccggagacggggaagacctgtctgctgaaggcc
atgctcaaccttcacagtgggcagaacgacaccatccccttgctcctggagatcgcgagg
cagacggacagcctgaaggagttcgtcaacgccagctacaccgacagctactacaggggc
cagacagcactgcacattgccatcgagaggcggaacatggcactggtgaccctcctggtg
gagaacggggcagacgtccaggctgcagccaacggggagttcttcaagaaaaccaaaggg
cggccaggattctacttcggtgagctgcccctgtccctagccgcctgcaccaaccagctg
ggcatcgtgaagttcctgctgcagaactcctggcagccggccgacatcggcgcccgggac
tcagtgggcaacacggtattgcacgccctggtggaggtggctgacaacactgccgacaac
accaagtttgtgacaagcatgtacaacgagcttctcatcctcggggcccggctgcacccc
acgctgaagctggaggagctcaccaacaagaaggggatgacgccgctggctctggccgct
gggacgggcaagatcggggtcttggcctatattctccagagagagatgcaggagcccgag
tgcaggcacttgtccaggaagttcacggagtgggcctatgggcctgtgcactcctctctc
tatgacctgtcctgcatcgacacatgtgagaagaactcggtgctggaggtgatcgcctat
agcagcagtgagacccctaatcgccacgacatgctcctggtggagccgctgaaccgactc
ctgcaggacaagtgggacagattcgtcaagcgcatcttctacttcaacttcttcatctac
tgtctctacatgatcatcttcaccatggctgcctactacaggccggtggttggcttgcct
ccctttaagatggaaaacactgaagactatttccgagttactggagagattctgtctgtg
ttaggaggagtctatttctttttccgagggattcagtacttcctgcagaggcggccatcg
ctgaagaccttgtttgtggacagctacagtgagatgcttttctttgtgcagtccctgctc
atgctggccactgtggtgctgtacttcagccactgcaaggagtatgtggcttccatggtg
ttctcgctggccatgggctggaccaacatgctgtactacacccgcggcttccagcagatg
ggcatttacgccgtcatgatagagaagatgatcctgagagacctgtgccgtttcatgttc
gtctacatcgtcttcttgttcgggttttccacagcggtggtgacgctgattgaagacggg
aagaataactctctgccgaatgagtccacgtctcacaggtggcgggggcctggctgcagg
ccccccgataactcctacaacagcctgtactccacgtgcctggagctgttcaagttcacc
atcggcatgggtgacctggagtttaccgagaactatgacttcaaggctgtgttcatcatc
ctgctgctggcatacgtcatcctcacctacatcctcctgctcaacatgctgatcgccctc
atgggtgagacggtcaacaagatcgcgcaggagagcaagaacatctggaagctgcagaga
gccatcaccatcctggacacggagaagagcttcctgaagtgcatgaggaaggccttccgc
tctggcaagctgctacaggtggggtacacacctgaaggccaggacgactacagatggtgc
ttcagggtggacgaggtgaactggaccacctggaacaccaacgtgggcatcatcaacgaa
gacccaggcaactgcgagggtgtcaagcgtatgccaagcttctccctgcgatcaagcaga
gtttcaggcagacactggaagaactttgccctggttccccttttaagagaggcaagtgcc
cgagacaggcactctgctcagcccgaggaggttcatctgcaacagttttcagggtccctt
aaaccagaagatgctgaagtcttcaagaatcccatcgcttctggggagaagtga
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