KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100412179
Entry
100412179         CDS       T03264                                 
Symbol
SHANK2
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 2
  KO
K15009  SH3 and multiple ankyrin repeat domains protein
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04724  Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    100412179 (SHANK2)
SSDB
Motif
Pfam: Ank_2 Ank SAM_1 SAM_2 Ank_4 Ank_3 Ank_5 SH3_2 SH3_9 PDZ_6 PDZ FERM_f0 SH3_1 SAM_4
Other DBs
NCBI-GeneID: 100412179
NCBI-ProteinID: XP_035119564
Ensembl: ENSCJAG00000001019
LinkDB
Position
11:complement(124157571..124872787)
AA seq 1860 aa
MHIRSGLTQAAMPRSPTSSEDEMAQSFSDYSVGSESDSSKEETIYDTIRATAEKPGGTRL
EESQGNTLVIRVVIHDLQQTKCIRFNPDATVWVAKQRILCTLTQSLKDVLNYGLFQPASN
GRDGKFLDEERLLREYPQPAGEGVPSLEFRYKKRVYKQASLDEKQLAKLHSKTNLKKCMD
HIQHRSVEKITKMLDRGLDPNFHDLETGETPLTLAAQLDHSMEVIKALRNGGAHLDFRAK
DGMTXLHKAARARNQVALKTLLELGASPDYKDSYGLTPLYHTAIVGGDPHCCELLLHEHA
MVCCKDENGWHEIHQACRYGHVQHLEHLLFYGADMSAQNASGNTALHICALYNQDSCARV
LLFRGGNKELKNYNSQTPFQVAIIAGNFELAEYIKNHKETDVVPFREAPAYSNRRRRPPN
TLAAPRVLLRSNSDNNLNASAPEWAVCSTGTSHRSLSPQLLQQMPSKPEGAAKTIGSYVP
GPRSRSPSLNRLGGAGEDGKRLQPLWHVGSPFIPAANKDSPLAFEYPGPKRKLYSAVPGR
LFVVIKPYQPQVDGEIPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVQCKPRD
SQAETRADRSKKLFRHYTVGSYDSFDTTSDCVIEEKTVILQKKDNEGFGFVLRGAKADTP
IEEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNSENVVKVGHRQVVNMIRQGG
NHLVLKVVTVTRNLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKASVRKKK
DKPEEIVPASKPSRAAENMAVEPRVATIKQRPSSRCFPAGSDMNSVYERQGIAVMTPTVP
GSPKAPFLGLPRGTMRRQKSIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPP
PPQSVPPSPPPPSPTTYNCPKSPTPRVYGTIKPAFNQNSAAKMSPATRSDTVATMMREKG
MFFRRELDRYSLDSEDLYNRNAGPQANFRNKRGQMPENPYSEVGKIASKAVYVPAKPARR
KGMLVKQSNVEDSPEKTCSIPIPTIIVKEPSTSSSGKSSQGSSMEIDPQAPEPPGQLRPD
ESLTVSSPFAAAIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGLPAPRTRPSMFPEE
ESFADEDGAEQLSSPMPGAAPREPENHFMDGAEASAQGEAGRALNSMSKAQGPESSPVVP
PTSGGTAGPGNYVHPLTGRLLDPSSPLALALSARDRAMKESQQGPKGEAPKADLNKPLYI
DTKMRPSLDAGFPTAARQNTRGPLRRQETENKYETDLGRDRKGDDKKNMLIDIMDTSQQK
SAGLLMVHTVDATKLDNSLQEEDEKADVETKPDSSPSEVPEGVSETEGALQISAAPEPTT
VPGRTIVAVGSMEEAVILPFRIPPPPLASVDLDEDFIFTEPLPPPLEFANSFDIPDDRAA
SVPALTDLVKQKKNDTPQSPSLNSSQPTNSADSKKPASLSNCLPASFLPPPESFDAVADS
GIEEVDSRSSSDHHLETTSTISTVSSISTLSSEGGENVDTCTVYADGQAFMVDKPPVPPK
PKMKPIIHKSNALYQDALMEEDVDSFVIPPPAPPPPPGSVQPGMAKVLQPRTSKLWGDVT
EIKSPILSGPKANVISELNSILQQMNREKSAKPGEGLDSPTGAKSASLAPRSPEIMSTIS
GTRSTTVTFTVRPGTSQPITLQSRPPDYESRTSGTRRAPSPVVSPTEMNKEILPAPLSAA
AASPSPTLSDVFSLPSQPPSGDLFGLNPVGRSRSPSPSILQQPISNKPFTTKPVHLWTKP
DVADWLESLNLGEHKEAFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq 5583 nt   +upstreamnt  +downstreamnt
atgcacattaggagtggcctgacacaggcagccatgccgcgcagtccgacatccagtgag
gacgagatggcccagagcttctccgactactccgtggggtcggagtcagacagctccaaa
gaagagaccatctacgacacgatccgggccactgcggagaagccgggcggcaccaggctg
gaagagagccagggcaacacgctggtgatccgcgtcgtcatccatgacctgcagcagacg
aaatgcatccgatttaacccagacgccacggtgtgggttgcaaagcagcggatcctgtgt
acgttaacccagagtctgaaagacgtcctcaactacggcctgttccagccggccagcaac
gggcgtgacggcaagttcctggatgaggagcggctcctgcgggagtacccgcagcccgcg
ggcgagggcgttccttccctggagtttcgatacaagaagcgggtgtataaacaagccagt
ctggatgagaagcagttggccaagctccactcgaagaccaatctgaagaaatgcatggac
cacattcagcatcgctcggtggagaagatcaccaagatgctggaccgaggcctggatccc
aatttccacgacctggagactggagagacccccctgaccttagctgcgcagctggaccac
tccatggaggtcatcaaagctctcagaaacggcggggctcacctggacttccgcgccaaa
gatgggatgacgnccctgcacaaagctgcccgagcgaggaaccaggttgccctgaagacg
cttttagagcttggcgcatccccagattataaagacagttacggcctcaccccgctgtat
cacacggccatcgtcgggggtgatccccactgctgcgagcttctcctgcacgaacacgcc
atggtgtgctgcaaggatgagaacggctggcacgagatccaccaggcctgcaggtacggg
cacgtgcagcacctggagcacctgctgttctacggggcagacatgagcgcccagaatgcc
tccgggaacacggccttgcacatctgcgccctctacaaccaggacagctgtgcaagagtg
cttctgtttcggggcggaaataaggaactgaaaaactacaacagccagactccatttcag
gtggccatcatcgcaggcaacttcgagctggcagaatacatcaagaaccacaaggagaca
gacgtcgtgcccttccgagaggccccggcgtactccaaccgccggcggcggccccccaac
acgctggccgccccccgggtcctgctgcgctccaacagtgacaacaacctcaacgccagc
gctcccgaatgggccgtctgctccacgggcacctcgcaccgcagcctctcaccccagctg
ttgcagcagatgcccagcaagcctgagggggccgccaagaccatcgggagctacgtgcct
gggccccgcagccggtccccgtcgctcaacaggctgggcggtgcaggcgaggatggcaag
aggctgcagccactctggcacgtcgggtcaccttttattcctgctgccaacaaggactca
cccttggccttcgagtacccggggcccaagcggaagctctacagcgccgtgcccgggagg
ctcttcgtcgtcatcaagccataccaaccccaagtcgatggcgagatcccccttcaccgc
ggcgacagggtcaaagttctgagcatcggcgaagggggcttctgggaaggcagcgcccgc
ggccacatcggatggtttccggcggaatgtgtggaggaggtccagtgtaagcccagggac
agccaggcagaaacccgtgctgaccgcagcaagaagctcttcaggcactacaccgtgggc
tcctatgacagcttcgacaccaccagtgactgcgttattgaggagaagacggtgatcctg
cagaaaaaggacaatgagggctttggattcgtgcttcgaggggccaaagctgacacaccc
attgaagaattcacaccaacaccggcgttcccagccctgcagtacctggagtccgtggac
gagggtggggtggcgtggcaagccggactgaggaccggggacttcttgattgaggttaac
agtgagaacgttgtgaaagtcggccacaggcaggtggtgaacatgatccgacagggaggg
aatcacctggtccttaaggtggtcacagtaaccaggaatctggaccctgacgacaccgcc
aggaagaaagctcccccacctccaaagcgagcaccaaccacagccctcaccctgcgctcc
aagtccatgacctcagagctggaggagctcgtggataaagcctcggtccggaagaagaag
gataaacccgaggagatagtcccggcctccaagccctcccgtgctgctgagaacatggcc
gtggagccgagggtggcgaccatcaagcagcggcccagcagccggtgcttcccggcgggc
tcggacatgaactctgtgtatgaacgccaagggatcgccgtgatgacacctacggttcct
gggagcccaaaagccccatttctgggccttcctcgaggtacgatgcgaaggcagaagtca
atagacagcagaatctttctatcaggaataacggaggaagagcggcagtttctggctcct
ccaatgctgaagttcaccagaagcctgtccatgccggacacctccgaggacatcccccct
ccaccacagtctgtgcccccgtccccaccaccaccttcccccaccacttacaactgcccc
aagtccccaactccaagagtctacggaacgattaagcctgcgttcaatcagaattctgct
gccaagatgtcccccgccaccaggtccgacacggtggccaccatgatgagggagaagggg
atgttcttcaggagagagctggaccgctactccctggactccgaagacctctacaatcgg
aacgctggccctcaggccaacttccgcaacaagagaggccagatgcctgaaaacccgtac
tcagaggtggggaagatcgccagcaaagccgtttacgtccccgccaagcctgccaggcgg
aaggggatgctggtgaagcagtccaacgtggaggacagccccgagaagacgtgctccatc
cccatcccaaccatcatcgtgaaggagccgtccaccagcagcagcggcaagagcagccag
ggcagcagcatggagatcgacccccaggccccggagccaccaggccagctgcggcccgat
gaaagcctgaccgtcagcagcccctttgccgccgccatcgccggagccgtccgcgacagg
gagaagcggctggaagccaggaggaattccccggccttcctctccacagacctgggagat
gaggacgtgggcctggggctgcctgcccccaggacacggccctccatgttccccgaggag
gagagttttgctgacgaggacggcgctgagcagctgtcgtcccccatgccaggcgccgcg
cccagggagcctgaaaaccatttcatggatggcgccgaggccagtgctcagggtgaggct
gggagggcactgaattccatgtccaaagcccaggggcctgagagcagcccagtggtgccc
ccgacgagcggcggcacagccggccccgggaattatgtccacccgctcacagggcggctg
ctcgatcccagctccccactggccctggcactctccgcaagggaccgagccatgaaggag
tctcagcaaggacccaaaggggaggcccccaaggccgacctcaacaaacctctttacatt
gataccaaaatgcggcccagcctggatgccggcttccctacagccgccaggcagaacacc
cgggggcccctgaggcggcaggagacagagaacaagtacgagactgacctgggccgggac
cggaagggtgacgacaagaagaacatgctgatcgacatcatggacacgtcccagcagaag
tcggctggcctgttgatggtccacactgtggacgccaccaagctggacaactccctgcag
gaagaggacgagaaggcagatgtggagacgaagccggacagctcgccgtccgaggtgcca
gaaggtgtttccgaaaccgaaggtgctttacagatctccgctgcccccgagcccaccacc
gtgcccggcagaaccattgtggcggtgggctccatggaggaggcggtgattttgccattc
cgcatccctcctccccctctggcatccgtggacttggatgaggattttatttttacagag
ccattgcctcctcccctggaatttgcaaatagttttgatatccccgatgaccgggcggct
tctgtcccggctctcacagacttagtgaagcagaagaaaaacgacacccctcagtcccct
tcgttgaactccagccaaccaaccaactctgcagacagcaagaagccagccagtctttca
aactgtctgcctgcctcattcctgccaccccctgaaagctttgacgccgtcgccgactct
gggatcgaggaggtggacagccggagtagcagcgaccaccacctcgagacgaccagcact
atctccaccgtgtctagcatctccaccctgtcttccgaaggtggagagaacgtggacacc
tgcacagtctatgcagatgggcaagcatttatggttgacaaacccccagtacctcctaag
ccaaaaatgaagcccatcattcacaaaagcaatgcactttatcaagacgcactcatggaa
gaggatgtagatagctttgttatccccccacccgctcccccacccccgccaggcagtgtc
cagcctgggatggccaaggttctccagccaaggacctccaagttgtggggtgacgtcaca
gagatcaaaagcccgattctctcaggcccaaaggcaaacgtgattagcgaattgaactct
atcctacagcaaatgaaccgagagaaatcggcaaagccaggggaaggactggattcacca
acgggagccaagtccgccagcctcgctccaagaagcccggagatcatgagcaccatctca
ggtacacggagcacgacggtcaccttcactgttcgccccggcacctcccagcccatcacc
ctgcagagccggccccccgactatgaaagcaggacctcaggaacaagacgtgccccaagc
cctgtggtctcgccaacagagatgaacaaagagatcctgcccgcccccctgtctgctgcc
gccgcctctccttctcccactctctcagatgtctttagccttccaagccagcccccttct
ggggacctatttggcttgaacccagtgggacgcagtaggtcgccatccccctcgatactg
caacagccaatctctaataagccttttacaactaaacctgtccacctgtggactaaacca
gatgtggccgattggctggaaagtctaaacttgggtgaacataaagaggccttcatggac
aatgagatcgatggcagtcacttaccaaacctgcagaaggaggacctcatcgatcttggg
gtgactcgagtcgggcacagaatgaacatagaaagggctttgaaacagctgctggacaga
taa

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