Callithrix jacchus (white-tufted-ear marmoset): 100412179
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Entry
100412179 CDS
T03264
Symbol
SHANK2
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100412179 (SHANK2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SAM_2
Ank_4
Ank_3
Ank_5
SH3_2
SH3_9
PDZ_6
PDZ
FERM_f0
SH3_1
SAM_4
Motif
Other DBs
NCBI-GeneID:
100412179
NCBI-ProteinID:
XP_035119564
Ensembl:
ENSCJAG00000001019
LinkDB
All DBs
Position
11:complement(124157571..124872787)
Genome browser
AA seq
1860 aa
AA seq
DB search
MHIRSGLTQAAMPRSPTSSEDEMAQSFSDYSVGSESDSSKEETIYDTIRATAEKPGGTRL
EESQGNTLVIRVVIHDLQQTKCIRFNPDATVWVAKQRILCTLTQSLKDVLNYGLFQPASN
GRDGKFLDEERLLREYPQPAGEGVPSLEFRYKKRVYKQASLDEKQLAKLHSKTNLKKCMD
HIQHRSVEKITKMLDRGLDPNFHDLETGETPLTLAAQLDHSMEVIKALRNGGAHLDFRAK
DGMTXLHKAARARNQVALKTLLELGASPDYKDSYGLTPLYHTAIVGGDPHCCELLLHEHA
MVCCKDENGWHEIHQACRYGHVQHLEHLLFYGADMSAQNASGNTALHICALYNQDSCARV
LLFRGGNKELKNYNSQTPFQVAIIAGNFELAEYIKNHKETDVVPFREAPAYSNRRRRPPN
TLAAPRVLLRSNSDNNLNASAPEWAVCSTGTSHRSLSPQLLQQMPSKPEGAAKTIGSYVP
GPRSRSPSLNRLGGAGEDGKRLQPLWHVGSPFIPAANKDSPLAFEYPGPKRKLYSAVPGR
LFVVIKPYQPQVDGEIPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVQCKPRD
SQAETRADRSKKLFRHYTVGSYDSFDTTSDCVIEEKTVILQKKDNEGFGFVLRGAKADTP
IEEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNSENVVKVGHRQVVNMIRQGG
NHLVLKVVTVTRNLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKASVRKKK
DKPEEIVPASKPSRAAENMAVEPRVATIKQRPSSRCFPAGSDMNSVYERQGIAVMTPTVP
GSPKAPFLGLPRGTMRRQKSIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPP
PPQSVPPSPPPPSPTTYNCPKSPTPRVYGTIKPAFNQNSAAKMSPATRSDTVATMMREKG
MFFRRELDRYSLDSEDLYNRNAGPQANFRNKRGQMPENPYSEVGKIASKAVYVPAKPARR
KGMLVKQSNVEDSPEKTCSIPIPTIIVKEPSTSSSGKSSQGSSMEIDPQAPEPPGQLRPD
ESLTVSSPFAAAIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGLPAPRTRPSMFPEE
ESFADEDGAEQLSSPMPGAAPREPENHFMDGAEASAQGEAGRALNSMSKAQGPESSPVVP
PTSGGTAGPGNYVHPLTGRLLDPSSPLALALSARDRAMKESQQGPKGEAPKADLNKPLYI
DTKMRPSLDAGFPTAARQNTRGPLRRQETENKYETDLGRDRKGDDKKNMLIDIMDTSQQK
SAGLLMVHTVDATKLDNSLQEEDEKADVETKPDSSPSEVPEGVSETEGALQISAAPEPTT
VPGRTIVAVGSMEEAVILPFRIPPPPLASVDLDEDFIFTEPLPPPLEFANSFDIPDDRAA
SVPALTDLVKQKKNDTPQSPSLNSSQPTNSADSKKPASLSNCLPASFLPPPESFDAVADS
GIEEVDSRSSSDHHLETTSTISTVSSISTLSSEGGENVDTCTVYADGQAFMVDKPPVPPK
PKMKPIIHKSNALYQDALMEEDVDSFVIPPPAPPPPPGSVQPGMAKVLQPRTSKLWGDVT
EIKSPILSGPKANVISELNSILQQMNREKSAKPGEGLDSPTGAKSASLAPRSPEIMSTIS
GTRSTTVTFTVRPGTSQPITLQSRPPDYESRTSGTRRAPSPVVSPTEMNKEILPAPLSAA
AASPSPTLSDVFSLPSQPPSGDLFGLNPVGRSRSPSPSILQQPISNKPFTTKPVHLWTKP
DVADWLESLNLGEHKEAFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atgcacattaggagtggcctgacacaggcagccatgccgcgcagtccgacatccagtgag
gacgagatggcccagagcttctccgactactccgtggggtcggagtcagacagctccaaa
gaagagaccatctacgacacgatccgggccactgcggagaagccgggcggcaccaggctg
gaagagagccagggcaacacgctggtgatccgcgtcgtcatccatgacctgcagcagacg
aaatgcatccgatttaacccagacgccacggtgtgggttgcaaagcagcggatcctgtgt
acgttaacccagagtctgaaagacgtcctcaactacggcctgttccagccggccagcaac
gggcgtgacggcaagttcctggatgaggagcggctcctgcgggagtacccgcagcccgcg
ggcgagggcgttccttccctggagtttcgatacaagaagcgggtgtataaacaagccagt
ctggatgagaagcagttggccaagctccactcgaagaccaatctgaagaaatgcatggac
cacattcagcatcgctcggtggagaagatcaccaagatgctggaccgaggcctggatccc
aatttccacgacctggagactggagagacccccctgaccttagctgcgcagctggaccac
tccatggaggtcatcaaagctctcagaaacggcggggctcacctggacttccgcgccaaa
gatgggatgacgnccctgcacaaagctgcccgagcgaggaaccaggttgccctgaagacg
cttttagagcttggcgcatccccagattataaagacagttacggcctcaccccgctgtat
cacacggccatcgtcgggggtgatccccactgctgcgagcttctcctgcacgaacacgcc
atggtgtgctgcaaggatgagaacggctggcacgagatccaccaggcctgcaggtacggg
cacgtgcagcacctggagcacctgctgttctacggggcagacatgagcgcccagaatgcc
tccgggaacacggccttgcacatctgcgccctctacaaccaggacagctgtgcaagagtg
cttctgtttcggggcggaaataaggaactgaaaaactacaacagccagactccatttcag
gtggccatcatcgcaggcaacttcgagctggcagaatacatcaagaaccacaaggagaca
gacgtcgtgcccttccgagaggccccggcgtactccaaccgccggcggcggccccccaac
acgctggccgccccccgggtcctgctgcgctccaacagtgacaacaacctcaacgccagc
gctcccgaatgggccgtctgctccacgggcacctcgcaccgcagcctctcaccccagctg
ttgcagcagatgcccagcaagcctgagggggccgccaagaccatcgggagctacgtgcct
gggccccgcagccggtccccgtcgctcaacaggctgggcggtgcaggcgaggatggcaag
aggctgcagccactctggcacgtcgggtcaccttttattcctgctgccaacaaggactca
cccttggccttcgagtacccggggcccaagcggaagctctacagcgccgtgcccgggagg
ctcttcgtcgtcatcaagccataccaaccccaagtcgatggcgagatcccccttcaccgc
ggcgacagggtcaaagttctgagcatcggcgaagggggcttctgggaaggcagcgcccgc
ggccacatcggatggtttccggcggaatgtgtggaggaggtccagtgtaagcccagggac
agccaggcagaaacccgtgctgaccgcagcaagaagctcttcaggcactacaccgtgggc
tcctatgacagcttcgacaccaccagtgactgcgttattgaggagaagacggtgatcctg
cagaaaaaggacaatgagggctttggattcgtgcttcgaggggccaaagctgacacaccc
attgaagaattcacaccaacaccggcgttcccagccctgcagtacctggagtccgtggac
gagggtggggtggcgtggcaagccggactgaggaccggggacttcttgattgaggttaac
agtgagaacgttgtgaaagtcggccacaggcaggtggtgaacatgatccgacagggaggg
aatcacctggtccttaaggtggtcacagtaaccaggaatctggaccctgacgacaccgcc
aggaagaaagctcccccacctccaaagcgagcaccaaccacagccctcaccctgcgctcc
aagtccatgacctcagagctggaggagctcgtggataaagcctcggtccggaagaagaag
gataaacccgaggagatagtcccggcctccaagccctcccgtgctgctgagaacatggcc
gtggagccgagggtggcgaccatcaagcagcggcccagcagccggtgcttcccggcgggc
tcggacatgaactctgtgtatgaacgccaagggatcgccgtgatgacacctacggttcct
gggagcccaaaagccccatttctgggccttcctcgaggtacgatgcgaaggcagaagtca
atagacagcagaatctttctatcaggaataacggaggaagagcggcagtttctggctcct
ccaatgctgaagttcaccagaagcctgtccatgccggacacctccgaggacatcccccct
ccaccacagtctgtgcccccgtccccaccaccaccttcccccaccacttacaactgcccc
aagtccccaactccaagagtctacggaacgattaagcctgcgttcaatcagaattctgct
gccaagatgtcccccgccaccaggtccgacacggtggccaccatgatgagggagaagggg
atgttcttcaggagagagctggaccgctactccctggactccgaagacctctacaatcgg
aacgctggccctcaggccaacttccgcaacaagagaggccagatgcctgaaaacccgtac
tcagaggtggggaagatcgccagcaaagccgtttacgtccccgccaagcctgccaggcgg
aaggggatgctggtgaagcagtccaacgtggaggacagccccgagaagacgtgctccatc
cccatcccaaccatcatcgtgaaggagccgtccaccagcagcagcggcaagagcagccag
ggcagcagcatggagatcgacccccaggccccggagccaccaggccagctgcggcccgat
gaaagcctgaccgtcagcagcccctttgccgccgccatcgccggagccgtccgcgacagg
gagaagcggctggaagccaggaggaattccccggccttcctctccacagacctgggagat
gaggacgtgggcctggggctgcctgcccccaggacacggccctccatgttccccgaggag
gagagttttgctgacgaggacggcgctgagcagctgtcgtcccccatgccaggcgccgcg
cccagggagcctgaaaaccatttcatggatggcgccgaggccagtgctcagggtgaggct
gggagggcactgaattccatgtccaaagcccaggggcctgagagcagcccagtggtgccc
ccgacgagcggcggcacagccggccccgggaattatgtccacccgctcacagggcggctg
ctcgatcccagctccccactggccctggcactctccgcaagggaccgagccatgaaggag
tctcagcaaggacccaaaggggaggcccccaaggccgacctcaacaaacctctttacatt
gataccaaaatgcggcccagcctggatgccggcttccctacagccgccaggcagaacacc
cgggggcccctgaggcggcaggagacagagaacaagtacgagactgacctgggccgggac
cggaagggtgacgacaagaagaacatgctgatcgacatcatggacacgtcccagcagaag
tcggctggcctgttgatggtccacactgtggacgccaccaagctggacaactccctgcag
gaagaggacgagaaggcagatgtggagacgaagccggacagctcgccgtccgaggtgcca
gaaggtgtttccgaaaccgaaggtgctttacagatctccgctgcccccgagcccaccacc
gtgcccggcagaaccattgtggcggtgggctccatggaggaggcggtgattttgccattc
cgcatccctcctccccctctggcatccgtggacttggatgaggattttatttttacagag
ccattgcctcctcccctggaatttgcaaatagttttgatatccccgatgaccgggcggct
tctgtcccggctctcacagacttagtgaagcagaagaaaaacgacacccctcagtcccct
tcgttgaactccagccaaccaaccaactctgcagacagcaagaagccagccagtctttca
aactgtctgcctgcctcattcctgccaccccctgaaagctttgacgccgtcgccgactct
gggatcgaggaggtggacagccggagtagcagcgaccaccacctcgagacgaccagcact
atctccaccgtgtctagcatctccaccctgtcttccgaaggtggagagaacgtggacacc
tgcacagtctatgcagatgggcaagcatttatggttgacaaacccccagtacctcctaag
ccaaaaatgaagcccatcattcacaaaagcaatgcactttatcaagacgcactcatggaa
gaggatgtagatagctttgttatccccccacccgctcccccacccccgccaggcagtgtc
cagcctgggatggccaaggttctccagccaaggacctccaagttgtggggtgacgtcaca
gagatcaaaagcccgattctctcaggcccaaaggcaaacgtgattagcgaattgaactct
atcctacagcaaatgaaccgagagaaatcggcaaagccaggggaaggactggattcacca
acgggagccaagtccgccagcctcgctccaagaagcccggagatcatgagcaccatctca
ggtacacggagcacgacggtcaccttcactgttcgccccggcacctcccagcccatcacc
ctgcagagccggccccccgactatgaaagcaggacctcaggaacaagacgtgccccaagc
cctgtggtctcgccaacagagatgaacaaagagatcctgcccgcccccctgtctgctgcc
gccgcctctccttctcccactctctcagatgtctttagccttccaagccagcccccttct
ggggacctatttggcttgaacccagtgggacgcagtaggtcgccatccccctcgatactg
caacagccaatctctaataagccttttacaactaaacctgtccacctgtggactaaacca
gatgtggccgattggctggaaagtctaaacttgggtgaacataaagaggccttcatggac
aatgagatcgatggcagtcacttaccaaacctgcagaaggaggacctcatcgatcttggg
gtgactcgagtcgggcacagaatgaacatagaaagggctttgaaacagctgctggacaga
taa
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