Callithrix jacchus (white-tufted-ear marmoset): 100414175
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Entry
100414175 CDS
T03264
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X2
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100414175 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100414175 (CNOT4)
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100414175 (CNOT4)
04121 Ubiquitin system [BR:
cjc04121
]
100414175 (CNOT4)
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100414175 (CNOT4)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100414175 (CNOT4)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100414175 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100414175 (CNOT4)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100414175 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Rtf2
Nup35_RRM_2
DZR_2
zf-CCCH_2
Torus
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
100414175
NCBI-ProteinID:
XP_002752004
Ensembl:
ENSCJAG00000012532
UniProt:
U3EAF0
LinkDB
All DBs
Position
8:109015765..109185212
Genome browser
AA seq
710 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPP
PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSD
WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKEL
SVQDQPSLSPTSLQNSSSHTTTAKGSGSGFLHPAAPTNANSLNSTFSVLPQRFPQFQQHR
AVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAD
NSSSVESLNMKEWQDGLRALLPNININFGGLPNSSSPSNANHSAPTSNTATTDSLSWDSP
GSWTDPAIITGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPFSTQ
IPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagtcctgatgcgaaggaagaccctgtggaatgccctctttgcatggagccc
ttggagatagatgatatcaactttttcccttgcacctgtggctaccagatttgccgattt
tgttggcatcgaattcgcactgatgaaaatgggctttgtcctgcatgtagaaagccatat
ccagaagacccagcagtttataaaccactctcccaggaagaactgcaaaggataaagaat
gagaaaaaacagaaacaaaatgagagaaaacagaaaatatcagaaaatcgcaaacatttg
gctagtgtacgtgttgtacaaaaaaacctcgtctttgttgtaggtttgtctcagcgctta
gcagacccagaggttttaaaacgaccagaatattttgggaagtttggtaaaatacataaa
gttgtcatcaataatagcacatcatatgcaggctcacagggtccaagtgccagtgcttat
gtaacctatatccggtcagaagatgctctcagagccatacagtgtgtcaacaatgtggta
gtagatggcagaacacttaaggcctctctaggtacaacaaaatactgcagttatttctta
aagaatatgcagtgtccaaaacccgactgcatgtatcttcatgaattgggggatgaggcg
gccagcttcacaaaagaggaaatgcaggcgggtaaacaccaagaatatgaacagaagcta
cttcaagaattatataaattaaatcccaattttcttcagctatctacgggttcagttgat
aaaaataagaacaaagtgacaccactgcagagccccattgacaaaccttcagattctctc
agtatagggaatggtgataattcccagcagatatctaacagtgatacgccttcaccacca
cctggtttgtcaaaatccaatccagtcatccccatcagttcatccaatcacagtgcacgg
tccccttttgaaggggcagtaacagagtcacagtcgttgttctcagacaattttcgccat
cccaaccctatcccaagtgggcttcctcctttccccagctccccacagacatccagtgac
tggcctacagcaccagaaccacagagcctcttcacatcagaaacaatcccggtatcatcc
tctacagactggcaagcagcttttggctttggttcttctaaacaaccagaggatgacttg
ggttttgatcccttcgatgtcactcgaaaagccttagcagacctgattgagaaggaactg
tccgttcaagaccaaccttccctttcgcccacatctcttcagaactcctcttcacacact
acaaccgccaaaggttcaggctctggatttctgcatcctgctgcacctacaaatgccaat
tctctcaatagtaccttttcagtcttgccccagaggtttcctcaatttcagcagcaccga
gcagtttataattcattcagttttccaggccaggcagcccgctatccttggatggccttt
ccacgcaatagcatcatgcacttgaaccacacagcaaaccccacctcaaatagtaatttc
ttggacttgaatctcccgccacagcacaacacaggtctgggagggatccctgtagcagac
aacagcagttctgtagagagtttaaatatgaaggaatggcaggacgggctaagggcactt
ctacccaacattaacatcaactttggtggactgcccaattcttcttccccctccaacgcc
aaccacagtgcaccaacgtccaacactgccaccaccgacagcctgagttgggacagccct
ggcagctggacagacccagccatcatcacaggtattccagcgtcttcaggaaacagttta
gactctcttcaagatgacaatcctccacactggctaaaatcccttcaggccctcacagag
atggacggccccagtgctgctccatcacagacccaccacagcgcccccttcagcacacag
atcccgctgcacagagccagttggaatccctaccctcctccttcaaacccttccagcttc
cactccccacccccaggctttcagacagccttcagaccccccagcaaaacccccacagat
ttactacagagttcaacactggaccgccattag
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