Coturnix japonica (Japanese quail): 107305997
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Entry
107305997 CDS
T04297
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like isoform X1
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cjo00535
]
107305997
Proteoglycans [BR:
cjo00535
]
Cell surface proteoglycans
Others
107305997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Big_9
TMEM154
Cadherin_C_2
TMEM52
Motif
Other DBs
NCBI-GeneID:
107305997
NCBI-ProteinID:
XP_015704219
LinkDB
All DBs
Position
Z:complement(18120576..18152828)
Genome browser
AA seq
2487 aa
AA seq
DB search
MSGRRNGANFGRRGERPSGSREEAAPAPAPDTEKAGPRCGGAEPPPSRCRRRGRRAGGKR
RSLRVGRGAPRRVPPLPVASSRSALFGGGMAGGLRAPLLAVLALLLAASRAALAVSFYGD
SFVALKMTEASCQTTLQLRFLTSKPHGLLFLAAGKRDYCLMELQSGNLQLRINFGMGEQI
LRSRQRSRLNDLAWHLVELHHERDNVTLLIDKNDRTTAKMPGFLYELNIDHGFYLGGTTE
LDVPYLVGGLPSFRGCIDDVLFNQQDILMPLRSTGFKKVHEVSVGCSDEFFAGEDEPISF
FSSRSYVSFPLWNVDGEGILEFALQTSAARGLLLYHPGQEGDFIAMEVEDGLIKAYIGKH
RSITHLSSLRSVNDSHWHYIKLKFTAEYLQLTLDKESVEKLFPPQNKLPLLTGSLYVGGV
DDSKRLEVIKLELPSVFGKNARGRSFKGCLRDLKVNSEKKSLKNVQITKDISAGCEAENA
FNTNLSLEMAVKYPTVKAAPTLAISPENSVSLGQENKNHLLVLSNLIVQEGGQASLESKH
IQVNLDFQKLGINLSQVLFEIKEPPSYGNLRLDIEPVQEVNMFTLHDVWQGKILYIHGGS
EDTYDYFNFSISANNGKIVPPYLQRNEEYMFAIVITPVNDAPEIMLAEGNLLLLIENSKK
RLTSDLIKVLDNDTDPLDLSLSVLGNLNANAGYLENSKHPGKAITTFSNEDLQKGDVFFV
HTGVRNSRIVLRANDGEKVSNTVVLRVMAIPLDYRVVINTGIKLVQGATVLISPRHLTVE
TNANLQELEIRYEITDAPQFGEVQRQHSRGEWKQASSFSQRSIQRSRVRYCSTFKEIQLE
NITDQFKFKVSIGNRISEEYVFPVQVKWLRYSLLKYTPLEIEKFKKKYLNSDNLFAVLVG
QEVPEDELHFRLLSLPKSGQILLNDQTLKEDSVFSQKDIADQKVAYELISRYHEDNHDSF
KFLISTKYLESNIFDFEIYIKSDFRNIILINNGLTVTEGEGELITSSKLFVQALDNKTFQ
YTVLKFPTHGKLKLINISDSFESNGNLTTFTNKDITDKRLMYVHDDSETVFDEFLVRASS
EESREWANFDPKVGLSSVEIKFNISVQLKNDEKPIRVVDKVFNIVRNGQRLLTLADLCYH
DPDSDFEDGQLLYTRRGISNGDLVLTNDSLHRLYQFKQEDLEQKQVLFIHHGADFGRFVL
FVTDGKHYTSFLLEVNATDPYISLANNTGLMVQKGKEEIVTTANLSATTNQDIRNDHEIT
FEITTFPKYGRISVNGLMIDSFTQLDLIRGYVTYRHDNSNNLIDMFNFTVYAKNIHLDSA
VNVRMYLESHHWPPRIVNNNSLLVEEGKPVKISKGKLQVAYENSSPSEIVFTVRQLPSHG
YIRKFLSAGSYLGADQKPVLTFTQQDVDEGKVQYVQTVSGQLSDCFSLDVTNGVQTVNGI
EISVDIIPRMIPLKVKNFTVVEGSSKALVEDYLNISSRHFTGLSCEIILVDQPKHGYFED
SNAPGIKLSKFTKKQVEQELIYYVHDGSEELMDNFTFIVNNTELRKQSLPQTMFVTVTAV
NDEAPVIKVNRILQVWVGSVTEITTDDLCAEDKDSSPSDLIYSITPPSNGHLALKSSPNE
SILSFTQAHIIERQLVFVHNGAMSGGFSFQVTDGLNSAPRQIFSITARTLVISLEVNKGL
TVFPGSRKPISQHDLKAVTSDVTSAGNRTINFLIVVSPKLGRLIRTNSDNTTQEILSFTQ
SMVNEGVIMYEHSEAELADWSAEDFFMFTVSSPPSILDPQMFHIIISYEIPRHDRNSRLL
ANTGTVVQEGGRILINKTHLDASNLLIKLPEGQRSMYEVWYQVVSLPQHGTVIVGERNVT
KEKPNFSQYILNKFGIVYVHDNSESLMDNFTFAVWLNLKTMSATKPHGEVLEEVFNITVI
PVNDQPPELKTKRLHLKVLQGDMSVLGSENLKVEDLDNTPAELKYSIVSNPNNGYLAMKS
NLSISIQDFTQADIDSGRVWFVQDGSSSSGVFYFSVTDGKHRPLYKLFSLEVVPIALVLV
NLTDVALLQGQTSVTITNTQLSAVTNGKSTNIMYEITQPLKYGHLMIENEQVTKFEQADL
NSGRLSYHLSNFTMFKEVLVFMIFTAESNLTEQVLNITMKPLVQVVSDMQISNQAVYKLR
RNDLDASELANLTNSNPRFEVIVPPAHGRIVKKRFVNDAVFEDIQTFTQTDIDGGAVLLS
IDTNMTGIDLLNDSFTFVLRADDVQPAVGHFEYSIVPCSPPLVQNFTAEVPIITSMTTLK
IPTTSNGRMLVFSHDEVPTVAPKKTAPGMWLGRKRWGNQLEEGPSLNLAVGTRGSAGTET
TDQVNAMSSREQVGESSNPWYIIIPLVLVSVLLIIAVISVCILLMCQKKEKAKPLVKNQT
NVVLSSPSHCLERSLTVPAVTVTPLLKGAEGNTSSALMAARHEQLLPMMHPPTVEQPLQN
SWLNLDPEMIQYCRKTNPTLKRSQYWV
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggcgccgaaatggggccaacttcggaagacgtggggaacggcccagtgggagc
cgcgaggaggcagctccggctccggcccccgacacagagaaggccgggccgcgctgtggt
ggcgcggagccgcccccctcacggtgccgcagaagagggaggcgggccggggggaagcgg
cgatcgctgagggtcgggaggggagctccgcggcgggtccccccgctccccgtggcttcg
tcccgctctgccctgttcggcggcggcatggcgggcgggctccgtgccccgctgctggca
gtgctggcgctgctgctggccgccagccgggcggctctcgcagtgtcattttatggtgat
agttttgtagcattgaagatgacagaggcatcctgtcagacaaccttacagttacggttt
ctaacaagcaagccacatggattgctctttcttgcagctgggaagagagattattgtttg
atggaattacagtcaggaaatctgcagttgagaattaactttggcatgggagaacaaata
ctgcgttctcggcagagatctcgtctgaatgatttagcttggcacttagttgaactgcat
catgaacgtgataatgtcacattgttaattgataaaaatgataggactactgcaaaaatg
cctggatttctctatgaattaaatattgatcatggattctacctaggtggtactactgaa
cttgatgttccttaccttgttggaggactgcccagctttcgagggtgtattgatgatgtg
ttatttaatcagcaagacattttgatgcccctgagatctactggctttaaaaaggtccat
gaagtttcagtgggatgcagtgatgaattctttgcaggtgaagatgagcccatcagtttt
tttagttccagatcctatgtttctttcccattatggaatgttgatggtgagggaatcttg
gagtttgcattgcaaacatcagctgcacgtggcctgctgctttatcatcctggacaagaa
ggagatttcattgcaatggaagtggaagatggattgattaaagcctatattggaaagcat
agaagtataactcacctttcttctcttaggtcagtcaatgacagtcattggcattatatt
aagctgaaatttactgcagaatatttacaactgactttggataaagaaagtgtggaaaaa
ttattccctcctcaaaacaagctgccacttctgacggggtctctctatgtaggtggtgta
gatgacagtaaacgactggaagtgattaagttagagctaccttctgtgtttgggaagaat
gccagaggaaggtccttcaaaggttgcttaagagacctaaaagtcaattcagaaaagaaa
tcgctgaagaatgttcaaataacaaaggatatttcagctggatgtgaagcagaaaatgct
tttaatacaaatctttctttggagatggctgtaaaatatcccacggtaaaagcagcccca
acacttgccatttcccctgaaaactctgtctctctgggacaggaaaataaaaaccaccta
ttagttctaagcaacctgattgttcaagaaggtgggcaagcctcacttgaatctaaacac
attcaagtcaatttagactttcagaaattagggattaatctatcacaagttctttttgaa
ataaaggaaccaccctcatatggtaacttgagactagatattgaaccagtgcaggaggta
aatatgtttactttgcacgatgtgtggcaagggaagattctgtacatccatggtggctct
gaagacacttatgattattttaatttctccatttctgcaaacaatgggaagattgtacct
ccatatttgcaaagaaatgaggagtacatgtttgccattgtcatcactccagtaaatgat
gctcctgagatcatgcttgctgagggaaacttgctgcttttgatagaaaactcaaagaaa
cgtttgactagtgacttgatcaaagtattagataatgatacagatcctctggacctcagt
ctttcagtgctcggaaatcttaatgcaaatgcaggatatttagaaaattcaaagcatcct
ggaaaggctattactactttttctaatgaggacttacaaaaaggtgatgttttctttgtc
cacacaggtgtcaggaactcgaggattgttctgagagcaaacgatggtgagaaagtgagc
aacactgttgtgttacgtgtcatggcaattcctttggattacagagttgttatcaacaca
ggaataaaacttgtccagggtgctacagttctaatctcacccagacatctgacagttgaa
acaaatgccaaccttcaagaactggagatacgctatgagattacagatgcaccccagttt
ggggaagttcaaaggcagcattcaaggggggagtggaagcaagccagctctttctctcaa
cgctccattcagcgcagccgtgtcaggtactgtagcacttttaaagaaattcagctggaa
aatattactgaccaatttaaattcaaagttagtataggaaacagaatcagtgaagagtat
gtgtttccagtccaagtgaaatggttaaggtacagtttattgaaatacactcctctagaa
attgaaaaatttaagaagaaatacttgaattcagataatctttttgccgtgcttgtgggt
caagaggtacctgaagatgagcttcattttagattgctgtccttaccaaagagtggacaa
atactgcttaatgaccagactttgaaagaagattcagtctttagccagaaagatattgct
gatcaaaaagtggcttatgagttaataagcagatatcacgaagacaaccatgattcattt
aaattcctcatctctacaaagtatctggaatcaaatatctttgactttgaaatctacatc
aaatcagattttagaaacataattttaattaataatggcttaactgttactgaaggtgaa
ggagaattaataacaagctcaaaattgtttgtgcaagcactggataataaaactttccaa
tatacagtattaaagtttcctacacatgggaaattgaaactcattaatatttcggattca
tttgagagtaatggcaatctcaccactttcactaataaagatataactgataagcgtctt
atgtatgtgcatgatgattctgaaacagtgtttgacgaatttcttgtcagagcttccagt
gaagaatcaagggagtgggcgaactttgatcctaaagtaggactttcctcagtagaaatt
aaattcaacatttctgtccagctgaagaatgatgaaaagccaatacgtgttgttgataaa
gtatttaacattgtgagaaatggacagcgattattaactttggcagatctttgctatcat
gatcctgattctgattttgaagatgggcagctgctatacacacgacgtggcatttccaat
ggcgatttggtgctaacaaatgattcattgcacagactctatcaattcaagcaagaagac
ctggagcaaaagcaagtcttgtttatacaccatggtgcagattttgggcgttttgtgctc
tttgtgacagatggcaaacactacacgtctttccttctagaagttaatgccactgatcct
tatattagcttggcaaataatacaggcctgatggttcaaaaaggaaaagaggaaattgtt
acaacagctaacctaagtgctactacaaaccaagacatcagaaatgatcatgagattaca
tttgagataactacttttccaaaatatggaagaatatctgtaaatggtctaatgatagac
tcctttactcagcttgatctgataagggggtacgtgacctacaggcatgataacagcaac
aaccttattgacatgtttaactttacagtctatgctaaaaatatccatcttgattctgct
gtgaatgttcgtatgtatttggaaagtcatcactggccaccaaggattgtgaacaataac
agtctcttagttgaagaaggaaaaccagttaagatcagtaaaggaaaactgcaagttgcc
tatgaaaacagttctccatctgagattgtgttcacagtgagacagcttccatctcatgga
tacattcggaagtttttatcagcagggagttatcttggtgccgaccagaagccagttctg
accttcacacagcaagatgttgatgagggcaaagttcagtacgtgcagacagtttctggc
caactaagtgactgtttttctctggatgtgaccaacggtgtacaaacggtgaatggaata
gaaatctcagttgacattatacccagaatgattcccttgaaagtaaagaacttcacagta
gttgaaggtagctcaaaagcccttgtggaagactatctaaacatttctagtagacacttc
acaggactcagctgtgaaattattttagttgaccagccaaagcatgggtattttgaagat
tctaatgctcccggaataaagttaagcaaatttaccaaaaaacaggtggaacaagaatta
atctactatgttcatgatggcagtgaggaactaatggacaattttacctttatagttaat
aacacagaattacggaaacaaagcttgccccaaacaatgtttgtaacagttactgcagta
aatgatgaagctcctgttataaaagttaacagaattcttcaggtttgggtgggttcagtc
acagaaataactactgatgacctctgtgcagaagataaggactcctcaccatcagacctg
atatattcaattacaccgcctagcaatggccacttggctctgaagtcttctccaaacgag
agcatccttagttttactcaggctcatataattgaacggcagctggtatttgtacacaat
ggagcaatgtctggaggcttcagctttcaggtaacagatggtttgaactctgcaccacga
cagatttttagcatcacagctcggactctggtcattagccttgaagtaaacaaaggactc
acagtctttccaggttccaggaaacctatttcacaacatgatctgaaagctgtaaccagt
gatgtgaccagtgcaggaaacagaactataaattttctgattgtagtttcccccaaactt
ggaaggctgatcagaacaaattctgataataccactcaggaaatcctcagttttacacag
tctatggtgaatgaaggtgtgatcatgtatgagcactcagaggcagaattagctgactgg
agtgcagaagatttctttatgtttactgtctcttctccaccatcaattctggatcctcag
atgttccatatcatcatttcatatgaaattcccaggcatgatcggaacagtcgtcttctt
gcaaatacaggtactgtagtccaggaaggaggcagaatattaatcaacaaaacacattta
gatgcttcaaatctattgattaagctacctgaaggacaacgctccatgtatgaagtctgg
tatcaagttgtgtctttaccccagcatggcacagtaattgttggagaaagaaacgttaca
aaagaaaaacctaatttctcacaatatatactgaacaagtttggaattgtgtatgtgcat
gataattctgaatcgcttatggacaatttcacttttgctgtttggttaaacctaaagacc
atgtctgcaacaaagccccatggtgaagttttagaagaggtgtttaatatcactgttatt
ccagtgaatgatcaaccaccagaactgaagactaaaaggctgcacctgaaagtcctgcag
ggagatatgtcagtgctggggtcagagaatctgaaagttgaagacctagacaacacccca
gcagagctcaaatattccattgttagcaaccccaataatggttatttagcaatgaagagc
aatctgagtatctctatacaggatttcacacaagctgatattgacagtggtagggtatgg
tttgtacaggatggaagttcttcttctggggtgttttatttcagtgtgactgatggtaaa
catcgtcctttatacaaacttttcagtcttgaagttgtaccaattgctcttgtccttgtc
aaccttacggatgttgcacttctgcagggccagacatctgtcactattactaacacacag
ctttcagctgtcacaaatggaaaaagcactaatatcatgtatgaaataactcaacccctc
aagtatgggcacctgatgattgaaaatgagcaggtgactaaatttgaacaggcagatttg
aactcaggaagactttcttaccatctgtcaaatttcaccatgttcaaagaagtactggtg
tttatgatattcactgcagaaagtaatctaacagaacaagtgctgaacatcacaatgaag
cctttagtgcaagttgtgtctgacatgcagatttcaaatcaagcagtttataaactcaga
aggaatgacctggatgcttctgagctagccaatttaacaaacagtaatcctagatttgaa
gtgatagtgcccccagctcatgggaggattgtaaaaaaaaggtttgtgaatgatgcagtg
tttgaagatattcagacattcacccaaactgacatcgatggaggtgctgtgcttctcagc
atagataccaatatgacaggcattgatctgttaaatgattcattcacatttgtgctcagg
gcagatgacgtgcagcccgctgttggccattttgagtattccatagtgccatgcagtcct
cctcttgtgcagaattttacagctgaagtgcctatcataaccagtatgaccactttaaag
attccaactacctcaaatggccggatgctagttttctcccatgatgaagtgcctacagta
gcaccaaagaagactgctccaggcatgtggttaggtcggaaacgctggggaaatcaactt
gaagaaggtccatcactaaatctggcagtgggaacaaggggatctgcggggactgagacc
acagatcaggttaatgccatgagttccagagagcaagtaggtgaaagcagcaacccttgg
tacatcattatacccctggtcctggtgtctgtgttactcattattgctgttatttctgtg
tgcattttgctaatgtgtcagaagaaagagaaggcaaaaccacttgtcaaaaatcaaaca
aatgtagtcctcagtagtccaagtcattgtctagaacgaagcttgactgtacctgctgtt
acagtgacccctctcctgaagggagctgagggaaatacatcctctgcactgatggcagca
agacatgaacagctgcttcctatgatgcatcctccaactgtagaacagcctttgcaaaat
agctggttaaacctagatcctgaaatgatccaatactgtcgaaaaacaaacccaactttg
aagcgcagtcagtactgggtgtag
DBGET
integrated database retrieval system
