Coturnix japonica (Japanese quail): 107311408
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Entry
107311408 CDS
T04297
Symbol
NID1
Name
(RefSeq) nidogen-1 isoform X1
KO
K06826
nidogen (entactin)
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107311408 (NID1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cjo04990
]
107311408 (NID1)
Domain-containing proteins not elsewhere classified [BR:
cjo04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
107311408 (NID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2F
NIDO
EGF_3
Ldl_recept_b
cEGF
Thyroglobulin_1
EGF_CA
FXa_inhibition
EGF
EGF_MSP1_1
SGL
Plasmod_Pvs28
hEGF
Motif
Other DBs
NCBI-GeneID:
107311408
NCBI-ProteinID:
XP_015713380
LinkDB
All DBs
Position
3:34015754..34049793
Genome browser
AA seq
1251 aa
AA seq
DB search
MGLWSCCAPCALLALALPLALPAELLLPHGAERGDAELEPGDDARSAALELGTALRFYGS
AVRSLYVTTNGIIAVNEPKNEDKYLGQFPVSFGAIAPFMADLDTTDGRGNVYYREDSSSD
VLQLASDYIKGGFPEAAFDPSSVVIVTWKLVAPYQGPGEDIPLEEKRNTFQAVLASSDSS
SYAIFLYPEDGLQFYSAYSKNDDGKIPAMVGFSQASTNYYFWENPGSYNVIANDEDSIRN
LHKSSNAGRQGVWVFEIGSSSDTIVPAKVSDVLASLGPSEEDQELTSKPFNLDYGSTEIR
PQYISSSTDSIEEDQHATYSVPQLAVEDFITSYQDVTGTPSTESFYRHREFPTAKAPPRQ
FPAQQFPPQGPQVIDVEEFDETGIVFRYQTDVQQTCANNRHQCSVHAICKDYPNGFCCSC
IAGYKGNGRQCVAEGSPQRVNGKVRGRIFVGNNPVPITFENTDLHSYVVMNHGRAYTAIS
TIPEALGYSLLPLASIGGIIGWMFAVEQQGYKNGFSITGGEFTRQTEVTFLGNNEKLVIK
QKFSGIDEHGHLTISTEMEGRVPEVPSGASVHIEPYTELYHASSSVITSSSTREYTVTEP
ERDGVASTYTGAYQWRQTISFDECIHDDSFHAASATQQLSVDSIFVLYNRDEQILRYAMS
NSIGPISDGSADISRNPCYTGTHNCDTNAVCRAGSGNRFSCECSVGFRGDGNVCYDIDEC
SEQPGLCGSNAVCNNQPGTYRCECVDGYQFAADGRTCVAVEYAINHCLTGTHGCDIPQRA
QCVYTGGSAYICTCLPGFSGDGRACEDIDECQQGRCHPDAFCYNTPGSFSCQCKAGYRGD
GFQCVLGGVVKTKCQHEKEVALGSGGAFFQREIRVGQFIPQCDEHGNYVPTQCHGSTGYC
WCVDRDGNEIDGTRSGPGVRPPCLSTAAPPVAIGPSVRPDTIPLPPGTHLLFAQSGKIEH
VPLEGNNMKKNGAKALLHIPDKVIIGVAYDCMDKMVYWTDISGPSISRASLHGGEPTTII
RTDLGSPEGIALDHLGRNIFWTDSQLDRIEVARLDGRQRRILFDTGLVNPRAIVVDPVRG
NLYWTDWNREAPKIETSYMDGTNRRILVKDDLGLPNGLTFDPYSSMLCWVDAGTKRLECM
NPNQLGRRKIVEGIQYPFGVTSYGKNLYYTDWRRDAVVAVDRMISVENDNFQPHKRSRLY
GITTAFAQCPRGHNYCTVNNGGCTHLCLATPEGRSCRCPDNTVGVDCIERN
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgggcttatggtcgtgctgtgccccctgcgcgctgctggctttggcgttgccgttggcg
ctgcccgcagagctgctgctgccgcacggcgccgaacgcggggatgcggagctggagccc
ggggacgacgcgcgctcggcggcgctggagctgggcacggcgctgcgcttctacggctcc
gccgtccgctccctctacgttaccacaaatgggattattgcagtgaatgaacctaagaat
gaagataaatatcttggccaatttccagtcagttttggggctattgctccttttatggct
gatctggatacaacagatggacgtggaaatgtttattacagagaagattcgtcctcagat
gtcttacaacttgcatcagactatatcaaaggggggtttcctgaagctgcttttgatccc
agcagtgttgttattgttacctggaagcttgtggctccataccagggacccggagaagat
attcctttggaagaaaagaggaacacattccaggctgttctagcctcttctgactccagt
tcctatgctattttcctttacccagaagatggtttgcagttctatagtgcatactcaaag
aacgatgatggaaagattcctgcgatggttggctttagccaggcctccacaaactactac
ttctgggaaaatccaggatcctacaatgtcattgctaatgatgaagacagcattagaaac
ttgcataaaagcagcaatgctgggagacaaggtgtctgggtgttcgagattggtagctca
tctgatactattgtgcctgccaaggtcagcgatgttctggcaagcctagggcccagtgaa
gaagaccaggagttgacttcaaaaccattcaacttagactatggctccactgaaataaga
ccgcagtacatctccagtagcacggacagtatagaagaggaccagcacgctacatacagt
gttcctcagttagctgtggaagactttataacttcataccaagatgtaacaggaacacct
tcaactgaatctttttatcgtcatcgagaattcccaacagcaaaagctcctcctcgccag
ttcccagcccagcagttccccccacagggaccccaggtcatagatgtggaagaatttgat
gaaactggtatagtgttccgctaccagacagacgtccaacagacctgtgctaacaatcgc
caccagtgctctgttcatgccatttgcaaagattaccccaatggattttgttgcagttgt
attgctggatacaaaggaaatggcagacaatgtgtagcagaaggttctcctcagagagtc
aacgggaaagtcagaggacgaatctttgtaggaaataaccccgttccaattacatttgag
aacaccgatctccactcatatgttgtgatgaaccatggacgtgcctatactgctatcagc
acaatcccagaagctttgggttattctttactgcctcttgcctctattggaggtataata
gggtggatgtttgctgtggagcagcaaggatataaaaatggattcagcattactggtggg
gagtttacacggcaaactgaagtcacttttcttggcaacaatgagaagctggttataaag
cagaaattcagtggaattgatgagcacggtcaccttaccatcagcacagaaatggaaggc
agagtacctgaagtcccttctggtgcatcagtccatatcgaaccttacactgaactctat
cacgcctctagttctgtgatcacttcatcgtccaccagagagtacacagtgacagagccg
gaaagggatggggttgcttccacgtacactggtgcctatcagtggcgacagaccatctcc
tttgatgaatgcattcatgatgactctttccatgctgcttctgctactcagcagctctca
gtggacagtatatttgttctgtataacagggacgagcaaattctgcgatatgctatgagc
aattccattggccccatcagtgatggttctgctgatattagccggaatccttgctacact
ggtacccataactgtgacaccaacgcagtatgtcgtgcaggaagcgggaatcgtttctcc
tgtgaatgttcagttggattccgtggagatggaaatgtttgttatgatattgatgagtgt
tcagagcaaccgggtctgtgtggcagcaatgcagtttgcaataaccagccgggaacgtac
cgatgtgagtgtgttgatggataccagtttgcagcagatgggcggacttgtgttgctgtt
gaatacgccataaaccactgcctgacgggcacacacggctgcgatatcccccagcgtgct
cagtgtgtgtacactggtgggtctgcctacatctgcacgtgcctccctggtttctctgga
gatgggcgtgcctgtgaggatatagatgaatgtcagcagggccgctgtcatccagatgct
ttctgctacaacacacctgggtccttcagctgccagtgtaaggcaggttatcgtggagat
ggtttccagtgtgtgttaggaggagtggtaaagaccaaatgccagcatgagaaagaagta
gctcttggaagtggaggcgctttcttccaaagagaaataagagttggtcagttcattccc
cagtgtgatgaacatgggaattacgtacccactcagtgccatggcagcactggatattgc
tggtgtgtggatagggatggaaatgagattgatggcaccagaagtggcccaggcgttcga
ccaccatgtctgagcacagctgctcctcctgttgctattgggccctctgttcgaccagac
acaattccgctgcctccaggaacacatttgctttttgcccaaagtgggaaaattgaacat
gttccactggagggaaacaacatgaagaaaaatggtgcaaaagcgctcttgcatattcca
gacaaagttattattggagttgcttatgactgcatggacaagatggtttactggacagac
atcagtggtccatcgatcagtagagctagcctacatggtggggagccaacgaccatcatc
agaacagacctgggaagccctgaagggatagcgctagatcatctaggtcgcaacatcttc
tggactgactctcaacttgatagaatagaagtggccagactggatgggcgccagcgtcgc
atcctttttgacactggcctggtgaacccccgtgcaattgttgtggatcctgtgagagga
aacctgtactggactgactggaacagagaagctcctaaaattgaaacttcatacatggat
ggcacaaacagaagaattcttgtgaaggatgatctgggattgccaaatgggctgacgttt
gatccttattcctcaatgctgtgttgggtagatgcaggtaccaagagactggaatgcatg
aaccctaatcagcttggtcgacgaaagattgttgaaggaattcagtatccttttggtgtt
acaagctatgggaagaatttgtactacacagactggagaagggatgctgttgtagctgtg
gatcgcatgatttcagtagaaaacgataacttccaaccccacaagcgctcccgtctctat
ggaatcactacagcttttgctcagtgcccaagaggacataactactgtacagtgaataat
ggtggttgtactcacctctgcttggctactccagaaggccgctcttgccgctgtcctgac
aacacagttggagtggactgtatagaaagaaactga
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integrated database retrieval system